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The map label for this gene is yagU [C]

Identifier: 162420188

GI number: 162420188

Start: 1947682

End: 1948215

Strand: Direct

Name: yagU [C]

Synonym: YpAngola_A1879

Alternate gene names: 162420188

Gene position: 1947682-1948215 (Clockwise)

Preceding gene: 162419389

Following gene: 162419079

Centisome position: 43.24

GC content: 45.69

Gene sequence:

>534_bases
GTGAATCTACAAGTCATTGCATGGGCCACGATCATCGGTGGATTCGTCAGCTCGCTAGTAAAATCAGGAACTGAAGTGAA
TATGCCTCCCCGCGTAGTTGGTGAGATATCGCCTCCTGCGGCAAATATTGACGCATGGCTTGGGTGGCTAGGAATTAATT
CTCATTCGATGGACTATGTTTATCAAGGGGTAACCATTTCGGGGGCTGTAGTGCTCTATCACTGGCTATTTAGTTTTGTT
TTTGCTTTTGTTTATGTCCTATTGTCCGCCTATTGGCCCAAAGTCAGATTATGGTATAGCGCAGCCTATGGATTGAGTAT
CACTGTCGCCATACATGGGGTTCTGATACCAGCATTAGGCTTCAGGCATCCAGCTTACTTGGCGGGTGAAACTGGGTGGT
TATGGAATCTCAATGGGTATGAATTATGGAGTGAAATAATAGGGCATCTCTGCTGGTCTGCCTCTCTTGAGATCTGCCTG
GTTGCTGTCCTTGCCTTTTTCTCAAAACCCATTAAAGGGATATGGGCAAATTAA

Upstream 100 bases:

>100_bases
CACCATTTTTCCTTTACCGCCTATTAACGCTTTTTTATCTTTTTTGTAAAATTCTCCATGCAAAAACGAGAGGAGAACTT
TGGCTATGTCTGAAAAAAGA

Downstream 100 bases:

>100_bases
AACTCCGTTTTATTTAATACTTGCTGTACCAACGCCCTGAAACGCTCTCAGGGCATGACTCTGCCATAGCTTCGTTTTTA
GGGTTCAGGTCAATTGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Inner Membrane Protein YagU; Phage Membrane Protein

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MNLQVIAWATIIGGFVSSLVKSGTEVNMPPRVVGEISPPAANIDAWLGWLGINSHSMDYVYQGVTISGAVVLYHWLFSFV
FAFVYVLLSAYWPKVRLWYSAAYGLSITVAIHGVLIPALGFRHPAYLAGETGWLWNLNGYELWSEIIGHLCWSASLEICL
VAVLAFFSKPIKGIWAN

Sequences:

>Translated_177_residues
MNLQVIAWATIIGGFVSSLVKSGTEVNMPPRVVGEISPPAANIDAWLGWLGINSHSMDYVYQGVTISGAVVLYHWLFSFV
FAFVYVLLSAYWPKVRLWYSAAYGLSITVAIHGVLIPALGFRHPAYLAGETGWLWNLNGYELWSEIIGHLCWSASLEICL
VAVLAFFSKPIKGIWAN
>Mature_177_residues
MNLQVIAWATIIGGFVSSLVKSGTEVNMPPRVVGEISPPAANIDAWLGWLGINSHSMDYVYQGVTISGAVVLYHWLFSFV
FAFVYVLLSAYWPKVRLWYSAAYGLSITVAIHGVLIPALGFRHPAYLAGETGWLWNLNGYELWSEIIGHLCWSASLEICL
VAVLAFFSKPIKGIWAN

Specific function: Unknown

COG id: COG3477

COG function: function code S; Predicted periplasmic/secreted protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786481, Length=176, Percent_Identity=30.6818181818182, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19565; Mature: 19565

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLQVIAWATIIGGFVSSLVKSGTEVNMPPRVVGEISPPAANIDAWLGWLGINSHSMDYV
CCEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCHHHE
YQGVTISGAVVLYHWLFSFVFAFVYVLLSAYWPKVRLWYSAAYGLSITVAIHGVLIPALG
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHCCCEEHHHHHHHHHHHHC
FRHPAYLAGETGWLWNLNGYELWSEIIGHLCWSASLEICLVAVLAFFSKPIKGIWAN
CCCCCEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNLQVIAWATIIGGFVSSLVKSGTEVNMPPRVVGEISPPAANIDAWLGWLGINSHSMDYV
CCEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCHHHE
YQGVTISGAVVLYHWLFSFVFAFVYVLLSAYWPKVRLWYSAAYGLSITVAIHGVLIPALG
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHCCCEEHHHHHHHHHHHHC
FRHPAYLAGETGWLWNLNGYELWSEIIGHLCWSASLEICLVAVLAFFSKPIKGIWAN
CCCCCEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA