Click here to switch to the map view.

The map label for this gene is insK [C]

Identifier: 162420169

GI number: 162420169

Start: 134110

End: 134919

Strand: Direct

Name: insK [C]

Synonym: YpAngola_A0133

Alternate gene names: 162420169

Gene position: 134110-134919 (Clockwise)

Preceding gene: 162421519

Following gene: 162418556

Centisome position: 2.98

GC content: 50.12

Gene sequence:

>810_bases
GTGGAATATCTGCTGGCGGCGTACCGTATCGGAGTACGCAGAGGGTGCAGGCTGATGATGCAGAGCCGCACTGTATACAA
CTATCGTAGCCATCGTGACGATCGGGCTATTACTCAGCGAATACGGGAAATTGCGGAGACGCGCATCCGTTATGGCTGTC
CGCGCATTCATATCCTGCTGCGGAGAGAAGGCTGGCTTGTTAACCATAAGAAAACGCACCGTATTTACTGTCTTGAGGGT
CTCAATCTACGTTCGAAACGTCCACGGTGGCATGTGACAGCGAGGCACAGGCACGCAAGTCCAGAAGTGACCGCGTTAGA
TCAGTGCTGGAGCATGGATTTCGTTGCTGATAATCTGTTCAACGGGCGTCGGGTCAGGGCGCTAACTATAGTGGATAATT
TTAGTCGTGAATGTCTGGCGATCGAGGTCGGTCAGGGGTTACGTGGAGATGATGTTGTGGCTGTCATGGACAGATTAAAA
CATTCGCTGGGGCGTATTCCACAAAGGCTGCAGACAGATAACGGCAGCGAATTCATCTCGAAGTCGATGGACCGATGGGC
GTATGAAAACAGGGTCTCGATGGACTTTTCAGGCCCCGGAAAGCCTACAGATAATGCCTTTATCGAGTCATTTAATGGCA
GTCTGAGGGATGAATGTCTGAACGTGCACGGGTTCCTTTCTCTGGAAGATGCTCAGGAGAAAATTGAACAATGGCGGCAA
GAATATAATCATTTTCGTCCGTATTCTTCGTTAAATAACCTGACTCCGGCAGAATTTGCCCGAAGTCATCAAAAAGGTCC
GGATCTCTGA

Upstream 100 bases:

>100_bases
AGCGCCTCAAACGTCTGGTGGCCGATCTGAGTCTGGATAAGGAAATGCTGCAGGATGTCATCCGAAAAAAGTTCTGAGGC
CGCTGCAGAAGCGCGATGCC

Downstream 100 bases:

>100_bases
TTTAGCCTGGTACGGATATTGGGGAGGGATCATCCTCTCCTTATTATTTTGTTCGTCGCGGCCCTTGAGTGGGGATACTG
TGGGTATAATCGATCACCGG

Product: transposase B

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MEYLLAAYRIGVRRGCRLMMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVNHKKTHRIYCLEG
LNLRSKRPRWHVTARHRHASPEVTALDQCWSMDFVADNLFNGRRVRALTIVDNFSRECLAIEVGQGLRGDDVVAVMDRLK
HSLGRIPQRLQTDNGSEFISKSMDRWAYENRVSMDFSGPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQ
EYNHFRPYSSLNNLTPAEFARSHQKGPDL

Sequences:

>Translated_269_residues
MEYLLAAYRIGVRRGCRLMMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVNHKKTHRIYCLEG
LNLRSKRPRWHVTARHRHASPEVTALDQCWSMDFVADNLFNGRRVRALTIVDNFSRECLAIEVGQGLRGDDVVAVMDRLK
HSLGRIPQRLQTDNGSEFISKSMDRWAYENRVSMDFSGPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQ
EYNHFRPYSSLNNLTPAEFARSHQKGPDL
>Mature_269_residues
MEYLLAAYRIGVRRGCRLMMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVNHKKTHRIYCLEG
LNLRSKRPRWHVTARHRHASPEVTALDQCWSMDFVADNLFNGRRVRALTIVDNFSRECLAIEVGQGLRGDDVVAVMDRLK
HSLGRIPQRLQTDNGSEFISKSMDRWAYENRVSMDFSGPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQ
EYNHFRPYSSLNNLTPAEFARSHQKGPDL

Specific function: Involved in the transposition of the insertion sequence is150 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1789981, Length=235, Percent_Identity=25.9574468085106, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1786462, Length=243, Percent_Identity=25.9259259259259, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790724, Length=242, Percent_Identity=25.2066115702479, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1789424, Length=242, Percent_Identity=25.2066115702479, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1789224, Length=242, Percent_Identity=25.2066115702479, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1788305, Length=242, Percent_Identity=25.2066115702479, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1787669, Length=242, Percent_Identity=25.2066115702479, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1786558, Length=242, Percent_Identity=25.2066115702479, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 31533; Mature: 31533

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYLLAAYRIGVRRGCRLMMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE
RREGWLVNHKKTHRIYCLEGLNLRSKRPRWHVTARHRHASPEVTALDQCWSMDFVADNLF
ECCCEEECCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
NGRRVRALTIVDNFSRECLAIEVGQGLRGDDVVAVMDRLKHSLGRIPQRLQTDNGSEFIS
CCCEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KSMDRWAYENRVSMDFSGPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQ
HHHHHHHHHCCEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHCEEEHHHHHHHHHHHHH
EYNHFRPYSSLNNLTPAEFARSHQKGPDL
HHHHCCCHHHHCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MEYLLAAYRIGVRRGCRLMMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE
RREGWLVNHKKTHRIYCLEGLNLRSKRPRWHVTARHRHASPEVTALDQCWSMDFVADNLF
ECCCEEECCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
NGRRVRALTIVDNFSRECLAIEVGQGLRGDDVVAVMDRLKHSLGRIPQRLQTDNGSEFIS
CCCEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KSMDRWAYENRVSMDFSGPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQ
HHHHHHHHHCCEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHCEEEHHHHHHHHHHHHH
EYNHFRPYSSLNNLTPAEFARSHQKGPDL
HHHHCCCHHHHCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]