| Definition | Yersinia pestis Angola, complete genome. |
|---|---|
| Accession | NC_010159 |
| Length | 4,504,254 |
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The map label for this gene is gluQ [H]
Identifier: 162419973
GI number: 162419973
Start: 1031174
End: 1032328
Strand: Direct
Name: gluQ [H]
Synonym: YpAngola_A1006
Alternate gene names: 162419973
Gene position: 1031174-1032328 (Clockwise)
Preceding gene: 162419894
Following gene: 162420585
Centisome position: 22.89
GC content: 50.13
Gene sequence:
>1155_bases ATGCTTGAAGATACTGGTTTTCAACGACTATTTAGCTCACAACTATTTGATCCCCAACCATTTGGCTCAAAACCATCAGG TTCTCAGCTATTCGGTTCTCAGCCATTCGCTGCTGCTCAACTATTTTCTGCTGCTCAACCACGTGCTTCCCAATTTCCCA GCGCCCAGCTTCCCGAGACTCAACAGCCTGTGGTTCAACAAGCGGTCATTCAACGATCAGCTAACCAACGAGCAACGAAT CAACCAACAGAATATATTGGCCGTTTTGCACCTTCGCCATCAGGGGATTTGCATTTTGGTTCACTGATTGCCGCACTCGG GAGTTATCTGCAAGCCCGTGCTCAAGGCGGGAAGTGGTTAGTTCGTATTGAAGATATTGATCCTCCCCGTGAAGTTCCTG GCGCGGCCTCACGTATTTTAGCGGCCTTAGAGCATTATGGTCTCCATTGGGATGGCCCGGTTATCTATCAATCACAGCGC CATGAAGCGTATCGGGCCACGCTCAACTGGCTGGAACAGCAGGGATTAAGCTATTACTGCACCTGCACCCGTAGCCGCAT CCACCAGCTCGGCGGGTTCTACGACGGCTACTGCCGTGATCGTCATTTACCCGCTAGCGGCGCGGCTATCCGTTTGCGGC AGACTCAGCCGGTTTACGCTTTTTATGATAAATTACTCGGCGAACTGCATGCTCACCCTGCGTTGGCACAAGAAGATTTT ATTATCCGTCGCCGTGACGGTCTGTTCGCTTATAATCTGGCGGTGGTGGTGGATGATGCTTTTCAGGGCGTGACCGAAAT TGTACGAGGTGCTGATTTGATTGAGCCGACAGTGCGCCAGATAGCGCTCTATCAGCAGTTGCAACACCCTGTCCCCGGCT ATATACACTTGCCGTTGGCGCTGAATAATCAGGGGAATAAGCTCTCCAAGCAGAATCATGCTCCTCCCTTGCCTAATGGC GATCCACGTCCTATTTTAATCGACGCATTAAAGTTTTTACGCCAACCGCTACCGGAATACTGGCAAGATCTTGATTTGTA TTTATTATTACGTTATGCCGTTGAGCATTGGACGTTGGTGTCAATCCCACTCCAGGGGGCAATAACCCCACAGAAAACAC AACGGCATTCTCAAAGTAAGTATGGTGAGCTATGA
Upstream 100 bases:
>100_bases GGCAGGCTAACACAGCATAATGTGTAACACGGCATAATGTGTAACACGGTGCCAGAGCCCTCTCCGGCACCGTGTTTGAA CTGTTGGACCCCTTCTTTTT
Downstream 100 bases:
>100_bases TTAGCCGCTGTTTTTCTGTCGTTCTGTTATTTATTAGCCACTATCGAGGTGTACCATTTTTACCCGAGTAGCCAATTTCT GCCGTAAGGTGCTGATCCGC
Product: glutamyl-Q tRNA(Asp) synthetase
Products: NA
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MLEDTGFQRLFSSQLFDPQPFGSKPSGSQLFGSQPFAAAQLFSAAQPRASQFPSAQLPETQQPVVQQAVIQRSANQRATN QPTEYIGRFAPSPSGDLHFGSLIAALGSYLQARAQGGKWLVRIEDIDPPREVPGAASRILAALEHYGLHWDGPVIYQSQR HEAYRATLNWLEQQGLSYYCTCTRSRIHQLGGFYDGYCRDRHLPASGAAIRLRQTQPVYAFYDKLLGELHAHPALAQEDF IIRRRDGLFAYNLAVVVDDAFQGVTEIVRGADLIEPTVRQIALYQQLQHPVPGYIHLPLALNNQGNKLSKQNHAPPLPNG DPRPILIDALKFLRQPLPEYWQDLDLYLLLRYAVEHWTLVSIPLQGAITPQKTQRHSQSKYGEL
Sequences:
>Translated_384_residues MLEDTGFQRLFSSQLFDPQPFGSKPSGSQLFGSQPFAAAQLFSAAQPRASQFPSAQLPETQQPVVQQAVIQRSANQRATN QPTEYIGRFAPSPSGDLHFGSLIAALGSYLQARAQGGKWLVRIEDIDPPREVPGAASRILAALEHYGLHWDGPVIYQSQR HEAYRATLNWLEQQGLSYYCTCTRSRIHQLGGFYDGYCRDRHLPASGAAIRLRQTQPVYAFYDKLLGELHAHPALAQEDF IIRRRDGLFAYNLAVVVDDAFQGVTEIVRGADLIEPTVRQIALYQQLQHPVPGYIHLPLALNNQGNKLSKQNHAPPLPNG DPRPILIDALKFLRQPLPEYWQDLDLYLLLRYAVEHWTLVSIPLQGAITPQKTQRHSQSKYGEL >Mature_384_residues MLEDTGFQRLFSSQLFDPQPFGSKPSGSQLFGSQPFAAAQLFSAAQPRASQFPSAQLPETQQPVVQQAVIQRSANQRATN QPTEYIGRFAPSPSGDLHFGSLIAALGSYLQARAQGGKWLVRIEDIDPPREVPGAASRILAALEHYGLHWDGPVIYQSQR HEAYRATLNWLEQQGLSYYCTCTRSRIHQLGGFYDGYCRDRHLPASGAAIRLRQTQPVYAFYDKLLGELHAHPALAQEDF IIRRRDGLFAYNLAVVVDDAFQGVTEIVRGADLIEPTVRQIALYQQLQHPVPGYIHLPLALNNQGNKLSKQNHAPPLPNG DPRPILIDALKFLRQPLPEYWQDLDLYLLLRYAVEHWTLVSIPLQGAITPQKTQRHSQSKYGEL
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=249, Percent_Identity=36.9477911646586, Blast_Score=131, Evalue=8e-31, Organism=Escherichia coli, GI226510925, Length=281, Percent_Identity=70.8185053380783, Blast_Score=409, Evalue=1e-115, Organism=Escherichia coli, GI1788743, Length=239, Percent_Identity=35.5648535564854, Blast_Score=147, Evalue=2e-36, Organism=Caenorhabditis elegans, GI71993394, Length=251, Percent_Identity=31.0756972111554, Blast_Score=112, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6324540, Length=269, Percent_Identity=32.3420074349442, Blast_Score=129, Evalue=7e-31, Organism=Drosophila melanogaster, GI24665321, Length=252, Percent_Identity=35.3174603174603, Blast_Score=134, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: NA
Molecular weight: Translated: 43094; Mature: 43094
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEDTGFQRLFSSQLFDPQPFGSKPSGSQLFGSQPFAAAQLFSAAQPRASQFPSAQLPET CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCC QQPVVQQAVIQRSANQRATNQPTEYIGRFAPSPSGDLHFGSLIAALGSYLQARAQGGKWL HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE VRIEDIDPPREVPGAASRILAALEHYGLHWDGPVIYQSQRHEAYRATLNWLEQQGLSYYC EEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCEEEE TCTRSRIHQLGGFYDGYCRDRHLPASGAAIRLRQTQPVYAFYDKLLGELHAHPALAQEDF EHHHHHHHHHCCCCCCHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC IIRRRDGLFAYNLAVVVDDAFQGVTEIVRGADLIEPTVRQIALYQQLQHPVPGYIHLPLA EEEECCCCEEEEHHEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEE LNNQGNKLSKQNHAPPLPNGDPRPILIDALKFLRQPLPEYWQDLDLYLLLRYAVEHWTLV ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE SIPLQGAITPQKTQRHSQSKYGEL EEECCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MLEDTGFQRLFSSQLFDPQPFGSKPSGSQLFGSQPFAAAQLFSAAQPRASQFPSAQLPET CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCC QQPVVQQAVIQRSANQRATNQPTEYIGRFAPSPSGDLHFGSLIAALGSYLQARAQGGKWL HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE VRIEDIDPPREVPGAASRILAALEHYGLHWDGPVIYQSQRHEAYRATLNWLEQQGLSYYC EEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCEEEE TCTRSRIHQLGGFYDGYCRDRHLPASGAAIRLRQTQPVYAFYDKLLGELHAHPALAQEDF EHHHHHHHHHCCCCCCHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC IIRRRDGLFAYNLAVVVDDAFQGVTEIVRGADLIEPTVRQIALYQQLQHPVPGYIHLPLA EEEECCCCEEEEHHEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEE LNNQGNKLSKQNHAPPLPNGDPRPILIDALKFLRQPLPEYWQDLDLYLLLRYAVEHWTLV ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE SIPLQGAITPQKTQRHSQSKYGEL EEECCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA