Definition Yersinia pestis Angola, complete genome.
Accession NC_010159
Length 4,504,254

Click here to switch to the map view.

The map label for this gene is yqjK [H]

Identifier: 162419556

GI number: 162419556

Start: 1150206

End: 1150490

Strand: Direct

Name: yqjK [H]

Synonym: YpAngola_A1114

Alternate gene names: 162419556

Gene position: 1150206-1150490 (Clockwise)

Preceding gene: 162418308

Following gene: 162419067

Centisome position: 25.54

GC content: 51.93

Gene sequence:

>285_bases
TTGAGCCGCCACCAGCTAGCATTGGAAAAAGAAGCATTACTGCGTGAGATCCAGCAACAACGTCTGGATCTCGCGGACAG
TGCTGCTCGTTGGGTTGAAGTTACCGCGCCCTTCGATCGTGGCTGGGCACAGATTATCAGTATGCGAAAATATTTGATAG
CAGGCGGTAGCTTGGTGGCCTTATACAGTGTTCGCCACCCCAGTAAGTTGCTCCGCTGGTCACGACGTGCAGTTAGCACC
TGGAGTACCCTTCAACTGTTTCGCCGCACTTTTTTATCACGCTAA

Upstream 100 bases:

>100_bases
TCGGTGTTATCTGGACACTCACTAAAGTGCGTCATTCTACGTTGCTGGGTTCAACCCGTAAGCAGTTGGAAACTGACCGC
GAGTTACTGGAGAAAGACCA

Downstream 100 bases:

>100_bases
TCCCTTCCCCACATCCTTACCCTATAGGTATAGGTCTTATTGTTCATCAACTTAAGATGTTTCTGTTGGCTTCCCCCCAC
TGCTAATTCAGTTTTTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MSRHQLALEKEALLREIQQQRLDLADSAARWVEVTAPFDRGWAQIISMRKYLIAGGSLVALYSVRHPSKLLRWSRRAVST
WSTLQLFRRTFLSR

Sequences:

>Translated_94_residues
MSRHQLALEKEALLREIQQQRLDLADSAARWVEVTAPFDRGWAQIISMRKYLIAGGSLVALYSVRHPSKLLRWSRRAVST
WSTLQLFRRTFLSR
>Mature_93_residues
SRHQLALEKEALLREIQQQRLDLADSAARWVEVTAPFDRGWAQIISMRKYLIAGGSLVALYSVRHPSKLLRWSRRAVSTW
STLQLFRRTFLSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789487, Length=82, Percent_Identity=42.6829268292683, Blast_Score=80, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10997; Mature: 10866

Theoretical pI: Translated: 12.01; Mature: 12.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRHQLALEKEALLREIQQQRLDLADSAARWVEVTAPFDRGWAQIISMRKYLIAGGSLVA
CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCHHH
LYSVRHPSKLLRWSRRAVSTWSTLQLFRRTFLSR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRHQLALEKEALLREIQQQRLDLADSAARWVEVTAPFDRGWAQIISMRKYLIAGGSLVA
CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCHHH
LYSVRHPSKLLRWSRRAVSTWSTLQLFRRTFLSR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]