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The map label for this gene is ymfQ [H]

Identifier: 162419368

GI number: 162419368

Start: 1526017

End: 1526364

Strand: Direct

Name: ymfQ [H]

Synonym: YpAngola_A1475

Alternate gene names: 162419368

Gene position: 1526017-1526364 (Clockwise)

Preceding gene: 162418497

Following gene: 162418887

Centisome position: 33.88

GC content: 52.3

Gene sequence:

>348_bases
ATGATCCAACGCCAGCGGGCGGTGGTCGCCAAATTGTTTGGTATTGGCGGCCAATCGGCGGCGTACTTTATCCGCGTGGC
AAAGGCTCTGGGCTATGACATTACCGTTACCCAATACCGGCAAGCCTGCGCGGGTATGTCGGTGTGCCGTGATGCATTGA
ACGGTGAAGAGTGGCCTTTTACCTGGCTAATTACCGCACCGGAAACCACCATTCATAATGCCCAATGCAGCTTAACGTAT
TGCAGTGATCCGCTGCGTTCGTGGGGCAATAAACAGCTTGAATGCCGGTTAGCGGTATTAAACCCGTCCCATTCTATTCT
GAAGTTTGGCTATACCCTGCTTAGTTGA

Upstream 100 bases:

>100_bases
TGTCGGCGGCTTTCCCGGCCACCGCCACGGCTCTCTTACCTGAATGGGAAGCGACACTGGGCTTGCCCGATTTGTGTGCG
CGATTGGTGAGATCGATAGC

Downstream 100 bases:

>100_bases
TATTTCAGTGTGTCTATCTGGCGGCCACGCCAAGTACTTCGGGTCATTATTCATTAACCATTTCTATTTTATCGCTTTAA
CCAGTGAGGTATTACCATGC

Product: putative bacteriophage protein GP48

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQACAGMSVCRDALNGEEWPFTWLITAPETTIHNAQCSLTY
CSDPLRSWGNKQLECRLAVLNPSHSILKFGYTLLS

Sequences:

>Translated_115_residues
MIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQACAGMSVCRDALNGEEWPFTWLITAPETTIHNAQCSLTY
CSDPLRSWGNKQLECRLAVLNPSHSILKFGYTLLS
>Mature_115_residues
MIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQACAGMSVCRDALNGEEWPFTWLITAPETTIHNAQCSLTY
CSDPLRSWGNKQLECRLAVLNPSHSILKFGYTLLS

Specific function: Unknown

COG id: COG3778

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein gp48 and H.influenzae HI_1521 [H]

Homologues:

Organism=Escherichia coli, GI1787399, Length=111, Percent_Identity=35.1351351351351, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018755 [H]

Pfam domain/function: PF10076 DUF2313 [H]

EC number: NA

Molecular weight: Translated: 12803; Mature: 12803

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQACAGMSVCRDALNGEEWPF
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCE
TWLITAPETTIHNAQCSLTYCSDPLRSWGNKQLECRLAVLNPSHSILKFGYTLLS
EEEEECCCCEECCCEEEEEECCCHHHHHCCCEEEEEEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure
MIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQACAGMSVCRDALNGEEWPF
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCE
TWLITAPETTIHNAQCSLTYCSDPLRSWGNKQLECRLAVLNPSHSILKFGYTLLS
EEEEECCCCEECCCEEEEEECCCHHHHHCCCEEEEEEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]