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The map label for this gene is ydbJ [H]

Identifier: 162418649

GI number: 162418649

Start: 2306830

End: 2307123

Strand: Direct

Name: ydbJ [H]

Synonym: YpAngola_A2210

Alternate gene names: 162418649

Gene position: 2306830-2307123 (Clockwise)

Preceding gene: 162421759

Following gene: 162419611

Centisome position: 51.21

GC content: 48.98

Gene sequence:

>294_bases
ATGGCGCTATTTTTAGCCGCATGTAGCAGCAATGATTCAAATATCAATACGTTAAATAATAGCGAGACCTACGAACCCGA
GCAGCAGGCTACCAACGCTATCGCTTATCGCAATGTGAATATGTCAAATGACGTCAATATGTCCAATTCGGCGGCAGCTA
ATTGTGCTAATGCGGGGGGAATATTGGCTAACACGAGGCAACTTCATGGCGGTAGCGTAGGCATGTGCCAGTTACCGGAT
GGCAAACGTTGTGACGAGGAAGCGTTGTTGCGCGGTGCATGCCCGGTGCGTTAA

Upstream 100 bases:

>100_bases
GATGTACTACATAATACTAGCTAGGTTTATAAATTATAGGTTGATAAGTCTATCCTGCCGGAGCAAAAGAATGAGAATAT
TTCAGGGAGTAGTGTGCGGT

Downstream 100 bases:

>100_bases
TTGGCAGCAGCTATCGGAAAACTGCCGCCTAAATAAGAGGTTATGCATCAATGAGCATCAGTTAACCCAATCTTTCTGTT
GGTAAACTAAGGTGTGCGTA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MALFLAACSSNDSNINTLNNSETYEPEQQATNAIAYRNVNMSNDVNMSNSAAANCANAGGILANTRQLHGGSVGMCQLPD
GKRCDEEALLRGACPVR

Sequences:

>Translated_97_residues
MALFLAACSSNDSNINTLNNSETYEPEQQATNAIAYRNVNMSNDVNMSNSAAANCANAGGILANTRQLHGGSVGMCQLPD
GKRCDEEALLRGACPVR
>Mature_96_residues
ALFLAACSSNDSNINTLNNSETYEPEQQATNAIAYRNVNMSNDVNMSNSAAANCANAGGILANTRQLHGGSVGMCQLPDG
KRCDEEALLRGACPVR

Specific function: Unknown

COG id: COG3042

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081894, Length=93, Percent_Identity=45.1612903225806, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005590 [H]

Pfam domain/function: PF03891 DUF333 [H]

EC number: NA

Molecular weight: Translated: 10222; Mature: 10091

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFLAACSSNDSNINTLNNSETYEPEQQATNAIAYRNVNMSNDVNMSNSAAANCANAGG
CEEEEEECCCCCCCCEECCCCCCCCCHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
ILANTRQLHGGSVGMCQLPDGKRCDEEALLRGACPVR
EECCCEECCCCCEEEEECCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure 
ALFLAACSSNDSNINTLNNSETYEPEQQATNAIAYRNVNMSNDVNMSNSAAANCANAGG
EEEEEECCCCCCCCEECCCCCCCCCHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
ILANTRQLHGGSVGMCQLPDGKRCDEEALLRGACPVR
EECCCEECCCCCEEEEECCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]