| Definition | Yersinia pestis Angola, complete genome. |
|---|---|
| Accession | NC_010159 |
| Length | 4,504,254 |
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The map label for this gene is 162418599
Identifier: 162418599
GI number: 162418599
Start: 1229276
End: 1229635
Strand: Direct
Name: 162418599
Synonym: YpAngola_A1186
Alternate gene names: NA
Gene position: 1229276-1229635 (Clockwise)
Preceding gene: 162421372
Following gene: 162418179
Centisome position: 27.29
GC content: 51.39
Gene sequence:
>360_bases ATGATCAGCTTGAGCACCTTATTCGGTCTGGGCAAATCCATGATGCTGCTGGCCGGTGTTGTCGCCATTGTTTGGGGTGT GCAAGCCAGCCGAACGCTGGATAGGCTCAATCAGGAGAATGTGCAATTAACCACGCAATTGGCGCTCATTGGGCAAATCA ATCAGCAACTCACACAGCATATTCAGGCCACCACGGTTCAGCTCAAGCAAGCTCAGGAACAAGAGCGTCTGGAAGGAGAA AAAAGCAGTGAATTACAAAAACGCTTGCGACTGGCGCAAAAAGGTAACCGCTGTGCTGAGGAGCCTGTGCCTGCTGCTGT TATCCGCATGCAGCAGCAGTCCTTCAGTGACGGTAAATGA
Upstream 100 bases:
>100_bases AGCAAGCCGCCAAGGCGATGGAGCTGCCATTGCAATGGGGGGGCGATTGGAAAAACTTTCGCGATGGTCCGCATTTTGAG CTGCCCAGAGAATGCTACCC
Downstream 100 bases:
>100_bases GTGTTTGCCTTTTCCTGAGGTTTTGCTCCCTCCGTGTCAGATGCCGACGTTTGATGTGCAGACCTGGGGAGATTATCCAC ATTATGTGGAGCGCACTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MISLSTLFGLGKSMMLLAGVVAIVWGVQASRTLDRLNQENVQLTTQLALIGQINQQLTQHIQATTVQLKQAQEQERLEGE KSSELQKRLRLAQKGNRCAEEPVPAAVIRMQQQSFSDGK
Sequences:
>Translated_119_residues MISLSTLFGLGKSMMLLAGVVAIVWGVQASRTLDRLNQENVQLTTQLALIGQINQQLTQHIQATTVQLKQAQEQERLEGE KSSELQKRLRLAQKGNRCAEEPVPAAVIRMQQQSFSDGK >Mature_119_residues MISLSTLFGLGKSMMLLAGVVAIVWGVQASRTLDRLNQENVQLTTQLALIGQINQQLTQHIQATTVQLKQAQEQERLEGE KSSELQKRLRLAQKGNRCAEEPVPAAVIRMQQQSFSDGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13200; Mature: 13200
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLSTLFGLGKSMMLLAGVVAIVWGVQASRTLDRLNQENVQLTTQLALIGQINQQLTQH CCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH IQATTVQLKQAQEQERLEGEKSSELQKRLRLAQKGNRCAEEPVPAAVIRMQQQSFSDGK HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MISLSTLFGLGKSMMLLAGVVAIVWGVQASRTLDRLNQENVQLTTQLALIGQINQQLTQH CCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH IQATTVQLKQAQEQERLEGEKSSELQKRLRLAQKGNRCAEEPVPAAVIRMQQQSFSDGK HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA