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The map label for this gene is ninB [H]

Identifier: 162418134

GI number: 162418134

Start: 2275461

End: 2275907

Strand: Direct

Name: ninB [H]

Synonym: YpAngola_A2174

Alternate gene names: 162418134

Gene position: 2275461-2275907 (Clockwise)

Preceding gene: 162420350

Following gene: 162419353

Centisome position: 50.52

GC content: 50.56

Gene sequence:

>447_bases
ATGGATAAAAAGGTCTTCGTGTTATGCGGTGATCAATACAAGCGAAATGCCATCCAGTTTATAAGTCAACTACCTGTTAA
TCCTGATAAACCACTCCTGATCACAATCCAAGAGCGAACCCGCACATTAGACCAGAATGCGCGTCTATGGGCCACGCTTG
GCGATATCGCTAAACAGGTTGTATGGCACGGACAGAAACTTAGCAGTGAGGACTGGAAGCACATATTCACTGCATCACTG
AAAGGGCAGAGGTCAGCGCCAGGGCTTGAAGGTGGCTTTGTTGTACTGGGGCAATCAACAAGCCGCATGACCGTTGGCGA
GCTGCGCGACCTGATAGAGCTGATCAATGCTTTCGGCGCTACGCATGGCGTTAAGTTCAGCGATGAATCACGGCTTGCAA
TTGAGTGGGCCAACCGGTTCGGTGACAAGGGAAAGGTGGCAGCATGA

Upstream 100 bases:

>100_bases
ACGAAAAAGAGATTAACCACGTCGCCATCTAAATCGTTATAAATCTCCGCGTAGCTTCGCTCTTTTCTCAGCAATACAGA
CGCCGCGCCGGAGAAAGAAA

Downstream 100 bases:

>100_bases
GTGAATCTGACTGGCTAATAATTTGCGCGTTCATCTGCTCTGTAATTTATGCAGGGATAAGAGGGAGACGAAGATGAACA
AGTTACCAAAAAATCGTAAC

Product: NinB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MDKKVFVLCGDQYKRNAIQFISQLPVNPDKPLLITIQERTRTLDQNARLWATLGDIAKQVVWHGQKLSSEDWKHIFTASL
KGQRSAPGLEGGFVVLGQSTSRMTVGELRDLIELINAFGATHGVKFSDESRLAIEWANRFGDKGKVAA

Sequences:

>Translated_148_residues
MDKKVFVLCGDQYKRNAIQFISQLPVNPDKPLLITIQERTRTLDQNARLWATLGDIAKQVVWHGQKLSSEDWKHIFTASL
KGQRSAPGLEGGFVVLGQSTSRMTVGELRDLIELINAFGATHGVKFSDESRLAIEWANRFGDKGKVAA
>Mature_148_residues
MDKKVFVLCGDQYKRNAIQFISQLPVNPDKPLLITIQERTRTLDQNARLWATLGDIAKQVVWHGQKLSSEDWKHIFTASL
KGQRSAPGLEGGFVVLGQSTSRMTVGELRDLIELINAFGATHGVKFSDESRLAIEWANRFGDKGKVAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ninB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008711 [H]

Pfam domain/function: PF05772 NinB [H]

EC number: NA

Molecular weight: Translated: 16495; Mature: 16495

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKVFVLCGDQYKRNAIQFISQLPVNPDKPLLITIQERTRTLDQNARLWATLGDIAKQV
CCCEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHH
VWHGQKLSSEDWKHIFTASLKGQRSAPGLEGGFVVLGQSTSRMTVGELRDLIELINAFGA
HHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
THGVKFSDESRLAIEWANRFGDKGKVAA
CCCCCCCCCCEEEEEEHHHCCCCCCCCC
>Mature Secondary Structure
MDKKVFVLCGDQYKRNAIQFISQLPVNPDKPLLITIQERTRTLDQNARLWATLGDIAKQV
CCCEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHH
VWHGQKLSSEDWKHIFTASLKGQRSAPGLEGGFVVLGQSTSRMTVGELRDLIELINAFGA
HHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
THGVKFSDESRLAIEWANRFGDKGKVAA
CCCCCCCCCCEEEEEEHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]