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The map label for this gene is flgH [H]

Identifier: 162219162

GI number: 162219162

Start: 346494

End: 347234

Strand: Direct

Name: flgH [H]

Synonym: Neut_0341

Alternate gene names: 162219162

Gene position: 346494-347234 (Clockwise)

Preceding gene: 114330363

Following gene: 114330365

Centisome position: 13.02

GC content: 50.07

Gene sequence:

>741_bases
ATGAAGCAATCCAGCTGCTTTGACGCAATAAATCAGCGTCTTCTTGGCACGCTGATTTCTCCCGTATTAATTGTCATGGT
CAGTATGGTGACAGGGTGTTCAATGATCACGCCCGCGCCGAAAGTGCAGCAACCGATGACGATCCGGCCGCCTGAGCCGC
TGATTATTCCTGTCAGTCAGAGCAATGGTGGGATTTATCAGGCGGCATTCAACTATCAGGGCAGCGGGCGCTATACGCCA
TTATTCGAGGATCGTCGCGCGCGCGGCATCGGTGACACCATCATCGTCATGCTCAACGAGAAGACCAATGCGAGCAAGAA
AAGTGGCAGTAACGCCCAGCGTGATGGGGGGATTGATCTTTCAGTACCGTCATTCCTCGGTTTGCCATTCAAATCCATTT
TTCAGGATCTTGATCTGGAAGCCAAATCAAGCAACAAGTTTGATGGCAAGGGAGAGAGCTCCAGCAACAATAATTTCACC
GGCACGATTACTGTGACTGTGATCGATATTCTGCCCAACGGCAATTTGCTGGTGAGCGGTGAAAAGCAGATCGGTATCAA
TCAGGGACATGAATTCATCCGGCTTTCCGGGGTGATCAACCCGATTAATGTTATGAACAACACCGTGTCATCGGTGCAGG
TGGCTGATGCGCGTATCGAATACCGGGGCACTGGTTATCTGGATGAAGCGCAAACCATGGGTTGGCTGTCACGTTTCTTT
TTGTCGATTTCACCTTTTTAA

Upstream 100 bases:

>100_bases
TCTGATTTTATGGATAGGTAATGTTCTGGCGCCATGGAATTTTTGTATGAAGAATTTTGGGGAAACACTGATTAAATTGA
TGGACGTCATTGCGAATGAA

Downstream 100 bases:

>100_bases
GCATACCAGAGGCATATCGCTATGACTTTATCCAAATGGATTCGGAATTTCGGGCTGCTGAATCTCGGATTATTGGGCTG
CCTGATTATTTCTGCCCCAG

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKQSSCFDAINQRLLGTLISPVLIVMVSMVTGCSMITPAPKVQQPMTIRPPEPLIIPVSQSNGGIYQAAFNYQGSGRYTP
LFEDRRARGIGDTIIVMLNEKTNASKKSGSNAQRDGGIDLSVPSFLGLPFKSIFQDLDLEAKSSNKFDGKGESSSNNNFT
GTITVTVIDILPNGNLLVSGEKQIGINQGHEFIRLSGVINPINVMNNTVSSVQVADARIEYRGTGYLDEAQTMGWLSRFF
LSISPF

Sequences:

>Translated_246_residues
MKQSSCFDAINQRLLGTLISPVLIVMVSMVTGCSMITPAPKVQQPMTIRPPEPLIIPVSQSNGGIYQAAFNYQGSGRYTP
LFEDRRARGIGDTIIVMLNEKTNASKKSGSNAQRDGGIDLSVPSFLGLPFKSIFQDLDLEAKSSNKFDGKGESSSNNNFT
GTITVTVIDILPNGNLLVSGEKQIGINQGHEFIRLSGVINPINVMNNTVSSVQVADARIEYRGTGYLDEAQTMGWLSRFF
LSISPF
>Mature_246_residues
MKQSSCFDAINQRLLGTLISPVLIVMVSMVTGCSMITPAPKVQQPMTIRPPEPLIIPVSQSNGGIYQAAFNYQGSGRYTP
LFEDRRARGIGDTIIVMLNEKTNASKKSGSNAQRDGGIDLSVPSFLGLPFKSIFQDLDLEAKSSNKFDGKGESSSNNNFT
GTITVTVIDILPNGNLLVSGEKQIGINQGHEFIRLSGVINPINVMNNTVSSVQVADARIEYRGTGYLDEAQTMGWLSRFF
LSISPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=230, Percent_Identity=50.8695652173913, Blast_Score=188, Evalue=3e-49,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 26685; Mature: 26685

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSSCFDAINQRLLGTLISPVLIVMVSMVTGCSMITPAPKVQQPMTIRPPEPLIIPVSQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEEC
SNGGIYQAAFNYQGSGRYTPLFEDRRARGIGDTIIVMLNEKTNASKKSGSNAQRDGGIDL
CCCCEEEEEEEECCCCCCCCCHHCHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE
SVPSFLGLPFKSIFQDLDLEAKSSNKFDGKGESSSNNNFTGTITVTVIDILPNGNLLVSG
ECHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEC
EKQIGINQGHEFIRLSGVINPINVMNNTVSSVQVADARIEYRGTGYLDEAQTMGWLSRFF
CCEECCCCCCCEEEEECCCCHHHHHCCCHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHH
LSISPF
HHCCCC
>Mature Secondary Structure
MKQSSCFDAINQRLLGTLISPVLIVMVSMVTGCSMITPAPKVQQPMTIRPPEPLIIPVSQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEEC
SNGGIYQAAFNYQGSGRYTPLFEDRRARGIGDTIIVMLNEKTNASKKSGSNAQRDGGIDL
CCCCEEEEEEEECCCCCCCCCHHCHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE
SVPSFLGLPFKSIFQDLDLEAKSSNKFDGKGESSSNNNFTGTITVTVIDILPNGNLLVSG
ECHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEC
EKQIGINQGHEFIRLSGVINPINVMNNTVSSVQVADARIEYRGTGYLDEAQTMGWLSRFF
CCEECCCCCCCEEEEECCCCHHHHHCCCHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHH
LSISPF
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12700255 [H]