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The map label for this gene is atoS [H]

Identifier: 162149057

GI number: 162149057

Start: 3379837

End: 3381747

Strand: Reverse

Name: atoS [H]

Synonym: GDI_3287

Alternate gene names: 162149057

Gene position: 3381747-3379837 (Counterclockwise)

Preceding gene: 162149058

Following gene: 162149056

Centisome position: 85.74

GC content: 70.38

Gene sequence:

>1911_bases
ATGACCGGCGGCGCGTCCCAGGCCGCCGCATCGCGGGCGGTCCCGCCGCAGGAGGGGCCGGCACGGCCGGCGCTGCTGCT
GGTCGAGGATTCCGATACCCAGGCGCTGCGCATCCGGCGGATGCTGGAAAGCCACGGCTTCGCCGTGACCCGGGTGGCCA
GCGGCGAGGCCGCGCTGGATTCCCTGGACGGGCGGATTCCCGACCTGGTGGTGGCCGATTATCACCTGCCGGGCATGAAT
GGCGGGCAGATGGCCCGGCAACTGCGCATGAGCGCGGTCACGCGCATGATTCCCGTCCTGATGCTGACCGAGGGCGGCGA
GCCGGGGCTGGAGCGCGAGGGGCTGGAAAGCGGCGCCGATGCCTATGTGCCCAAATCGGCCGACCCGGACCTGATCGTCT
TTCGCATCCGCGCGCTGCTGCGCGAGGGCGCGGGCGCGCTGCTGCGTGACGGCGCGGGGGCGCGCGACGGCATGTTCCGC
CGGGCGCGTATCCTGATCGTGGGCGGCGACGGGACGCGTGACCGTGACGTGACGTCGCTGGCGGCCCTGATGCGCAGCGA
CGGGCACGAGGTCACGGTGGCCCACCAGCCGATGTCGATGGACCGGCAGGACTGGTTCGAAGCGGCGCGCGAACCCGACT
GCGTGGTCGTGGACCTGGTGTCCGACGCCTTCGACGGCATCGCCTTCTGCCGCGAACTGGACGATGTGCGGCAGGAGGTC
GTGGTGGCGGGCGGCGTGCCGCCCCGCATCCTGGGGCTGAGCGGCGGGCAGGCGCTGCGGGGCGTGTTCTCGGCCCGGGC
GTTCGAGGCCGGGGTGGACGACCTGGTGGCCGACGATGTCGAGCCCGACGTGCTGGCGCTGCGCATCCGCGCGCTGGTGC
GGCGCAAGCTGCTGCAGGACGAGGCGCGGCGCGTGGACCAGGAACGGCAGGCGCGCGAGATCGCGGTGGAGACCGCGCGG
GCCGAGGCGGCGTCCATCGCGTCCAAGGCCTCGCTGGCCGAGGCGCTGGAACAGGCCAACGCCGAACTGGCCGATGCCAA
CCGCAAGCTGATCGAAACCCAGGGCAAGCTGATCCAGACCGCCAAGATGGCCTCGCTGGGCGAACTGGTGGCCGGCATCG
CGCACGAGATCAACAATCCGCTGGCCTTCATCCTGGCGCACAAGGACACGGTCGCCCGCCTGCTGGCGCGGGTGATCGCG
GATGAGGAACGCGATGCGGCGCCGGCGGATGCCGGGCATCATGCCGCGCTGATGAAATGCCGCGATCGCGTCGAATCGAT
GAACCTGGGGTTGCGGCGAATCCAGAACCTGGTGCTGAACCTGCGCAAGTTCTCGCGCCTGGAAGAAGGCCAGTTCCAGG
TCATCGACGTGCCGGAGGCGCTGGAGACGGTGCTGGCGCTGCTGGGGCAGAAATTCGGCAGCGAGATCGTGGTGGAACGG
GATTATCGCGCGCCCGACCGGCTGTATTGCCAGTCGGCGCTGCTCAACCAGGTGCTTATGAACATCATCAGCAACGCCGC
CGACGCGATACAGTCCATGAGCGACGCGGGACCCGCGCGGGGCATGATCCGGATCGGCACCGAACTGCGCGACGGCGAGG
CGGGGCGGACCTATGTCTTCACCGTGATGGATAACGGGCCGGGGATTCCGCCGGACCTGAAGGAGCGGATCTTCGAGCCG
TTCTTCACCACCAAGCCGGTCGGCGCGGGCACCGGGCTGGGGCTGGCCATCGCCTATGGCGTCGTGCAGGCCCATCGCGG
CACGATCTCGATCACCGATGCGCCGCGTTCGGCCGACGGGACGACCGATGGGGCCGCCGGCGGGACGGTCTTCACCGTGT
CCGTGCCGTGGCAGCCGCATCTGGCGGCCATGGCCGATTCCACCGCCCTGCCGGCGGGAGAACACGCATGA

Upstream 100 bases:

>100_bases
CCTCGATCAGCCTGCCGCTGGGCCAGATCGCGCCGCACCTGGCCGCGATCGCCACGGCCACGTCCACGCTTGCGATCGCC
GGGGCCGAGGCGCGGCTGCC

Downstream 100 bases:

>100_bases
CCGATCGTCCCGTCGTCCTGCTGGTCGATGACGAACCGGAAATCCTGGTGGCGCTGGCCGACCTGCTGGAAGATTCGTTC
ACCATCCTGTCCACCACCTC

Product: histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 636; Mature: 635

Protein sequence:

>636_residues
MTGGASQAAASRAVPPQEGPARPALLLVEDSDTQALRIRRMLESHGFAVTRVASGEAALDSLDGRIPDLVVADYHLPGMN
GGQMARQLRMSAVTRMIPVLMLTEGGEPGLEREGLESGADAYVPKSADPDLIVFRIRALLREGAGALLRDGAGARDGMFR
RARILIVGGDGTRDRDVTSLAALMRSDGHEVTVAHQPMSMDRQDWFEAAREPDCVVVDLVSDAFDGIAFCRELDDVRQEV
VVAGGVPPRILGLSGGQALRGVFSARAFEAGVDDLVADDVEPDVLALRIRALVRRKLLQDEARRVDQERQAREIAVETAR
AEAASIASKASLAEALEQANAELADANRKLIETQGKLIQTAKMASLGELVAGIAHEINNPLAFILAHKDTVARLLARVIA
DEERDAAPADAGHHAALMKCRDRVESMNLGLRRIQNLVLNLRKFSRLEEGQFQVIDVPEALETVLALLGQKFGSEIVVER
DYRAPDRLYCQSALLNQVLMNIISNAADAIQSMSDAGPARGMIRIGTELRDGEAGRTYVFTVMDNGPGIPPDLKERIFEP
FFTTKPVGAGTGLGLAIAYGVVQAHRGTISITDAPRSADGTTDGAAGGTVFTVSVPWQPHLAAMADSTALPAGEHA

Sequences:

>Translated_636_residues
MTGGASQAAASRAVPPQEGPARPALLLVEDSDTQALRIRRMLESHGFAVTRVASGEAALDSLDGRIPDLVVADYHLPGMN
GGQMARQLRMSAVTRMIPVLMLTEGGEPGLEREGLESGADAYVPKSADPDLIVFRIRALLREGAGALLRDGAGARDGMFR
RARILIVGGDGTRDRDVTSLAALMRSDGHEVTVAHQPMSMDRQDWFEAAREPDCVVVDLVSDAFDGIAFCRELDDVRQEV
VVAGGVPPRILGLSGGQALRGVFSARAFEAGVDDLVADDVEPDVLALRIRALVRRKLLQDEARRVDQERQAREIAVETAR
AEAASIASKASLAEALEQANAELADANRKLIETQGKLIQTAKMASLGELVAGIAHEINNPLAFILAHKDTVARLLARVIA
DEERDAAPADAGHHAALMKCRDRVESMNLGLRRIQNLVLNLRKFSRLEEGQFQVIDVPEALETVLALLGQKFGSEIVVER
DYRAPDRLYCQSALLNQVLMNIISNAADAIQSMSDAGPARGMIRIGTELRDGEAGRTYVFTVMDNGPGIPPDLKERIFEP
FFTTKPVGAGTGLGLAIAYGVVQAHRGTISITDAPRSADGTTDGAAGGTVFTVSVPWQPHLAAMADSTALPAGEHA
>Mature_635_residues
TGGASQAAASRAVPPQEGPARPALLLVEDSDTQALRIRRMLESHGFAVTRVASGEAALDSLDGRIPDLVVADYHLPGMNG
GQMARQLRMSAVTRMIPVLMLTEGGEPGLEREGLESGADAYVPKSADPDLIVFRIRALLREGAGALLRDGAGARDGMFRR
ARILIVGGDGTRDRDVTSLAALMRSDGHEVTVAHQPMSMDRQDWFEAAREPDCVVVDLVSDAFDGIAFCRELDDVRQEVV
VAGGVPPRILGLSGGQALRGVFSARAFEAGVDDLVADDVEPDVLALRIRALVRRKLLQDEARRVDQERQAREIAVETARA
EAASIASKASLAEALEQANAELADANRKLIETQGKLIQTAKMASLGELVAGIAHEINNPLAFILAHKDTVARLLARVIAD
EERDAAPADAGHHAALMKCRDRVESMNLGLRRIQNLVLNLRKFSRLEEGQFQVIDVPEALETVLALLGQKFGSEIVVERD
YRAPDRLYCQSALLNQVLMNIISNAADAIQSMSDAGPARGMIRIGTELRDGEAGRTYVFTVMDNGPGIPPDLKERIFEPF
FTTKPVGAGTGLGLAIAYGVVQAHRGTISITDAPRSADGTTDGAAGGTVFTVSVPWQPHLAAMADSTALPAGEHA

Specific function: Member of the two-component regulatory system AtoS/AtoC; may activate AtoC by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=277, Percent_Identity=32.4909747292419, Blast_Score=112, Evalue=6e-26,
Organism=Escherichia coli, GI1790436, Length=274, Percent_Identity=32.8467153284672, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1790300, Length=284, Percent_Identity=29.5774647887324, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI1786599, Length=117, Percent_Identity=37.6068376068376, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1790860, Length=120, Percent_Identity=38.3333333333333, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1786912, Length=293, Percent_Identity=26.2798634812287, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789809, Length=126, Percent_Identity=38.0952380952381, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 68014; Mature: 67883

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGGASQAAASRAVPPQEGPARPALLLVEDSDTQALRIRRMLESHGFAVTRVASGEAALD
CCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCHHHH
SLDGRIPDLVVADYHLPGMNGGQMARQLRMSAVTRMIPVLMLTEGGEPGLEREGLESGAD
HHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHCCCCCCC
AYVPKSADPDLIVFRIRALLREGAGALLRDGAGARDGMFRRARILIVGGDGTRDRDVTSL
CCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEEEEECCCCCCCHHHHHH
AALMRSDGHEVTVAHQPMSMDRQDWFEAAREPDCVVVDLVSDAFDGIAFCRELDDVRQEV
HHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH
VVAGGVPPRILGLSGGQALRGVFSARAFEAGVDDLVADDVEPDVLALRIRALVRRKLLQD
HHCCCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EARRVDQERQAREIAVETARAEAASIASKASLAEALEQANAELADANRKLIETQGKLIQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AKMASLGELVAGIAHEINNPLAFILAHKDTVARLLARVIADEERDAAPADAGHHAALMKC
HHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
RDRVESMNLGLRRIQNLVLNLRKFSRLEEGQFQVIDVPEALETVLALLGQKFGSEIVVER
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEC
DYRAPDRLYCQSALLNQVLMNIISNAADAIQSMSDAGPARGMIRIGTELRDGEAGRTYVF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEE
TVMDNGPGIPPDLKERIFEPFFTTKPVGAGTGLGLAIAYGVVQAHRGTISITDAPRSADG
EEECCCCCCCHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCC
TTDGAAGGTVFTVSVPWQPHLAAMADSTALPAGEHA
CCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TGGASQAAASRAVPPQEGPARPALLLVEDSDTQALRIRRMLESHGFAVTRVASGEAALD
CCCCCHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCHHHH
SLDGRIPDLVVADYHLPGMNGGQMARQLRMSAVTRMIPVLMLTEGGEPGLEREGLESGAD
HHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHCCCCCCC
AYVPKSADPDLIVFRIRALLREGAGALLRDGAGARDGMFRRARILIVGGDGTRDRDVTSL
CCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEEEEECCCCCCCHHHHHH
AALMRSDGHEVTVAHQPMSMDRQDWFEAAREPDCVVVDLVSDAFDGIAFCRELDDVRQEV
HHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH
VVAGGVPPRILGLSGGQALRGVFSARAFEAGVDDLVADDVEPDVLALRIRALVRRKLLQD
HHCCCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EARRVDQERQAREIAVETARAEAASIASKASLAEALEQANAELADANRKLIETQGKLIQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AKMASLGELVAGIAHEINNPLAFILAHKDTVARLLARVIADEERDAAPADAGHHAALMKC
HHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
RDRVESMNLGLRRIQNLVLNLRKFSRLEEGQFQVIDVPEALETVLALLGQKFGSEIVVER
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEC
DYRAPDRLYCQSALLNQVLMNIISNAADAIQSMSDAGPARGMIRIGTELRDGEAGRTYVF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEE
TVMDNGPGIPPDLKERIFEPFFTTKPVGAGTGLGLAIAYGVVQAHRGTISITDAPRSADG
EEECCCCCCCHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCC
TTDGAAGGTVFTVSVPWQPHLAAMADSTALPAGEHA
CCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8346225; 9097040; 9278503 [H]