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The map label for this gene is rrf2 [H]

Identifier: 162148975

GI number: 162148975

Start: 3297203

End: 3297745

Strand: Reverse

Name: rrf2 [H]

Synonym: GDI_3205

Alternate gene names: 162148975

Gene position: 3297745-3297203 (Counterclockwise)

Preceding gene: 162148976

Following gene: 162148974

Centisome position: 83.61

GC content: 63.17

Gene sequence:

>543_bases
ATGTCACTTTATGGCGCAAGCACCGAATATGTCCTGCACAGCCTTCTCTGGCTCGTCGGCAATCCCGAACCTGTCAGCAG
CCTCGATCTGGCGGACCTGCAGAACATTCCCGCGGCGTTTGTCGCCAAGCTTCTTCCCAGGCTCGAAAAGGCCGGCCTTC
TTGAAGCTTCCGAAGGGTTGAGGGGTGGATACAGGCTGGCCAGACCCGCCGAGGACATCAGCGTGCTGGCCGTCGTCGAC
GCCGTTGAAGGCAGAAAGAGCCTTTTCAACTGTCAGGAAATCCGCAGACGCTGCGCCCTGTTCGACGAGCGGCCGCCACG
ATGGGCGACGCAGGGCGTTTGCGGCATTCACGCCGTCATGCTGCGGGCCGAGCAGGCCATGCGGCAGGAACTGGCTCGGA
CCTCGCTCGCCGATCTGGCCAGATCCGTTCGGGACAAGGCGCCGCTTCCGTTTCTGGGAGACGCGCAATCGTGGTTCGAC
GAACGCGTGCAGACCCGCCGCACCAGCAAGGTCAGACAACGAAGACGGCCGGACACGCCCTGA

Upstream 100 bases:

>100_bases
CACTTCGCGCCTGTGCCCCTCGTAAAAGCAATCTCATCAGGACGACAGATTCGTCCCTCCAGGTCTTGCGAATCATAACG
CGGACTCATAACGTCCGCGT

Downstream 100 bases:

>100_bases
CCCGCGACCATTCTCCTGCAACAGGACAATCGAATATGCGCAAGTTCATCGCTCTTGCCGCTATGGCAGCAAGCCTCTGG
GCCTCTCCCCTCCTTGCGGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSLYGASTEYVLHSLLWLVGNPEPVSSLDLADLQNIPAAFVAKLLPRLEKAGLLEASEGLRGGYRLARPAEDISVLAVVD
AVEGRKSLFNCQEIRRRCALFDERPPRWATQGVCGIHAVMLRAEQAMRQELARTSLADLARSVRDKAPLPFLGDAQSWFD
ERVQTRRTSKVRQRRRPDTP

Sequences:

>Translated_180_residues
MSLYGASTEYVLHSLLWLVGNPEPVSSLDLADLQNIPAAFVAKLLPRLEKAGLLEASEGLRGGYRLARPAEDISVLAVVD
AVEGRKSLFNCQEIRRRCALFDERPPRWATQGVCGIHAVMLRAEQAMRQELARTSLADLARSVRDKAPLPFLGDAQSWFD
ERVQTRRTSKVRQRRRPDTP
>Mature_179_residues
SLYGASTEYVLHSLLWLVGNPEPVSSLDLADLQNIPAAFVAKLLPRLEKAGLLEASEGLRGGYRLARPAEDISVLAVVDA
VEGRKSLFNCQEIRRRCALFDERPPRWATQGVCGIHAVMLRAEQAMRQELARTSLADLARSVRDKAPLPFLGDAQSWFDE
RVQTRRTSKVRQRRRPDTP

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 20164; Mature: 20033

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLYGASTEYVLHSLLWLVGNPEPVSSLDLADLQNIPAAFVAKLLPRLEKAGLLEASEGL
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCHHHHHCC
RGGYRLARPAEDISVLAVVDAVEGRKSLFNCQEIRRRCALFDERPPRWATQGVCGIHAVM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LRAEQAMRQELARTSLADLARSVRDKAPLPFLGDAQSWFDERVQTRRTSKVRQRRRPDTP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLYGASTEYVLHSLLWLVGNPEPVSSLDLADLQNIPAAFVAKLLPRLEKAGLLEASEGL
CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCHHHHHCC
RGGYRLARPAEDISVLAVVDAVEGRKSLFNCQEIRRRCALFDERPPRWATQGVCGIHAVM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LRAEQAMRQELARTSLADLARSVRDKAPLPFLGDAQSWFDERVQTRRTSKVRQRRRPDTP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8335628 [H]