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The map label for this gene is petA [H]

Identifier: 162148949

GI number: 162148949

Start: 3265508

End: 3266191

Strand: Direct

Name: petA [H]

Synonym: GDI_3179

Alternate gene names: 162148949

Gene position: 3265508-3266191 (Clockwise)

Preceding gene: 162148948

Following gene: 162148952

Centisome position: 82.79

GC content: 71.05

Gene sequence:

>684_bases
TTGGCCGACAGGACCACGATGACGACGACCGGAACGCCCGAGACAGGCCCCCACCCGACCGGAACCGCCCTTCCCGGCAC
GGGGCGCCGCGATTTCCTGACGCTGGTCACCCTGGCCGCCGGCGGCGCGGGGGCGGCCGCGTTCGCATGGCCGTTCCTGG
ACAGCCTGCGCCCCGGCGACACGAAATCGGCGCGTGCGCCGGTCGACGTGGACGTGTCGAAACTGCCGCCCGGCCAGCAG
ATCACGGTGGTGTGGCACGGCAGCCCGGTCTTCATCACCCACCGCACGCCGGAATCCCTGGCCCGGCTGCAGGAGGCCGC
GCTGGCCGCCCGGCTGCGCGACCCGTCATCGGGCGCGCTGCAGCAGCCGCCCTATGCCGCCAACTGGCACCGTTCCATCA
AACCGGAATTTGGCGTGGTGGTCGGGATCTGCACCCATCTGGGCTGCGTACCGACCTATTCCCCCGCCCCCGATCCGGCA
ACGCCGATCGCCAACTGGCCCGGCGGCTATGCCTGCCCGTGCCACGGGTCCAAATTCGACCTGGCGGGCCGGGTCTTCAC
CGGCGCGCCGGCGCCGTACAACCTGCCCGTCCCGCCCTATTCGATGCCCGGCCCGACGACGATCCGCCTGGGGCAGAACC
CGGCGGGGTCCGATTTCGACTTTTCCTCTATCCAGCAGATCTGA

Upstream 100 bases:

>100_bases
AGGTCGACCGGGTGGACAAGACGGTGCAGACCGACTGGGGATCACCCGGAACGTTCCACCCCATGCCGCGCTGACGCCCC
TTCCATCCCACCCCGAACGC

Downstream 100 bases:

>100_bases
CCGGGTCCTGCCCGGCAAACGCCGCGCGCAGGCGTTTGCCGCCGAAACGGATGGCCGCCTTCCCCCACGGCATGAACGAA
TACAGGTTCAGGTAGCCGTG

Product: ubiquinol-cytochrome c reductase iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MADRTTMTTTGTPETGPHPTGTALPGTGRRDFLTLVTLAAGGAGAAAFAWPFLDSLRPGDTKSARAPVDVDVSKLPPGQQ
ITVVWHGSPVFITHRTPESLARLQEAALAARLRDPSSGALQQPPYAANWHRSIKPEFGVVVGICTHLGCVPTYSPAPDPA
TPIANWPGGYACPCHGSKFDLAGRVFTGAPAPYNLPVPPYSMPGPTTIRLGQNPAGSDFDFSSIQQI

Sequences:

>Translated_227_residues
MADRTTMTTTGTPETGPHPTGTALPGTGRRDFLTLVTLAAGGAGAAAFAWPFLDSLRPGDTKSARAPVDVDVSKLPPGQQ
ITVVWHGSPVFITHRTPESLARLQEAALAARLRDPSSGALQQPPYAANWHRSIKPEFGVVVGICTHLGCVPTYSPAPDPA
TPIANWPGGYACPCHGSKFDLAGRVFTGAPAPYNLPVPPYSMPGPTTIRLGQNPAGSDFDFSSIQQI
>Mature_226_residues
ADRTTMTTTGTPETGPHPTGTALPGTGRRDFLTLVTLAAGGAGAAAFAWPFLDSLRPGDTKSARAPVDVDVSKLPPGQQI
TVVWHGSPVFITHRTPESLARLQEAALAARLRDPSSGALQQPPYAANWHRSIKPEFGVVVGICTHLGCVPTYSPAPDPAT
PIANWPGGYACPCHGSKFDLAGRVFTGAPAPYNLPVPPYSMPGPTTIRLGQNPAGSDFDFSSIQQI

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=190, Percent_Identity=36.8421052631579, Blast_Score=107, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17540418, Length=147, Percent_Identity=39.4557823129252, Blast_Score=104, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6320811, Length=166, Percent_Identity=37.3493975903614, Blast_Score=110, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24580896, Length=160, Percent_Identity=37.5, Blast_Score=109, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 23776; Mature: 23645

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADRTTMTTTGTPETGPHPTGTALPGTGRRDFLTLVTLAAGGAGAAAFAWPFLDSLRPGD
CCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCHHHHHHHHHHCCCCC
TKSARAPVDVDVSKLPPGQQITVVWHGSPVFITHRTPESLARLQEAALAARLRDPSSGAL
CCCCCCCCCCCHHCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCC
QQPPYAANWHRSIKPEFGVVVGICTHLGCVPTYSPAPDPATPIANWPGGYACPCHGSKFD
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC
LAGRVFTGAPAPYNLPVPPYSMPGPTTIRLGQNPAGSDFDFSSIQQI
CCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCC
>Mature Secondary Structure 
ADRTTMTTTGTPETGPHPTGTALPGTGRRDFLTLVTLAAGGAGAAAFAWPFLDSLRPGD
CCCCEEEECCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCHHHHHHHHHHCCCCC
TKSARAPVDVDVSKLPPGQQITVVWHGSPVFITHRTPESLARLQEAALAARLRDPSSGAL
CCCCCCCCCCCHHCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCC
QQPPYAANWHRSIKPEFGVVVGICTHLGCVPTYSPAPDPATPIANWPGGYACPCHGSKFD
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC
LAGRVFTGAPAPYNLPVPPYSMPGPTTIRLGQNPAGSDFDFSSIQQI
CCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA