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The map label for this gene is intS [C]

Identifier: 162148916

GI number: 162148916

Start: 3235727

End: 3236182

Strand: Reverse

Name: intS [C]

Synonym: GDI_3146

Alternate gene names: 162148916

Gene position: 3236182-3235727 (Counterclockwise)

Preceding gene: 162148917

Following gene: 162148909

Centisome position: 82.05

GC content: 61.84

Gene sequence:

>456_bases
ATGGGCGATCTCACTGATAAAGAGCTGAAAAATCTGAAGCCGAGGGCCAAGCTCTACAAGATTACCGATCGCGATGGGAT
GTACGCGGCCGTCACGCCGACCGGCGTCGTATCGTTCCGGTATCAGTACCGAGTGAGCGGACGGCAGGAAGTGTTGACCA
TCGGCCGCTACAGCGCCGAGGCGGCACGCAGGTTGTCGCGGGCGCCCGACGCTTTGGAATACGGAATGGAGGTGTCGCTT
GCGGAGGCCAGGGCATTGCTAGTGCGCGCCCGGCGTCAGGTCGAGCGAGGCGAGTCGCCGTCTAAAGCCAAGGTGGAGAA
GCGCACGGCATTAGCCGAGGCGGTGACGTTCGGCGGGTGGGTGGAAGCTTACTTCAAGCACAAAGGCGATCCCAAGTCCG
GGGCTGAAAGGCTCGCCGACAGCACCCTGGCGATGCGCCGATCCGTCTATTGTTAA

Upstream 100 bases:

>100_bases
GTACCGATGTTGGTATGGCGCATGATGGTCGAGAAACGGGCTTCCGGTACCACCAACCCTTCTGATGGTATCCGGCGCCC
CCTTGATCGGATGCGGATTT

Downstream 100 bases:

>100_bases
TTTCTGCTGAGATTTGACCCTGGGTTTTCATCGAGAACTGACCCGGCCTTTGGTTATCTCTGCTATGTTTTATGGGCTGG
TCAAGCGGTTGCCTTTTCCT

Product: phage integrase

Products: NA

Alternate protein names: Phage Integrase; Integrase; Phage-Related Integrase; Phage Integrase Family Protein; Integrase Or Site-Specific Recombinase; CP4-Like Integrase; Integrase-Like Protein

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MGDLTDKELKNLKPRAKLYKITDRDGMYAAVTPTGVVSFRYQYRVSGRQEVLTIGRYSAEAARRLSRAPDALEYGMEVSL
AEARALLVRARRQVERGESPSKAKVEKRTALAEAVTFGGWVEAYFKHKGDPKSGAERLADSTLAMRRSVYC

Sequences:

>Translated_151_residues
MGDLTDKELKNLKPRAKLYKITDRDGMYAAVTPTGVVSFRYQYRVSGRQEVLTIGRYSAEAARRLSRAPDALEYGMEVSL
AEARALLVRARRQVERGESPSKAKVEKRTALAEAVTFGGWVEAYFKHKGDPKSGAERLADSTLAMRRSVYC
>Mature_150_residues
GDLTDKELKNLKPRAKLYKITDRDGMYAAVTPTGVVSFRYQYRVSGRQEVLTIGRYSAEAARRLSRAPDALEYGMEVSLA
EARALLVRARRQVERGESPSKAKVEKRTALAEAVTFGGWVEAYFKHKGDPKSGAERLADSTLAMRRSVYC

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16893; Mature: 16761

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDLTDKELKNLKPRAKLYKITDRDGMYAAVTPTGVVSFRYQYRVSGRQEVLTIGRYSAE
CCCCCHHHHHCCCCCHHEEEEECCCCCEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHH
AARRLSRAPDALEYGMEVSLAEARALLVRARRQVERGESPSKAKVEKRTALAEAVTFGGW
HHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
VEAYFKHKGDPKSGAERLADSTLAMRRSVYC
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GDLTDKELKNLKPRAKLYKITDRDGMYAAVTPTGVVSFRYQYRVSGRQEVLTIGRYSAE
CCCCHHHHHCCCCCHHEEEEECCCCCEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHH
AARRLSRAPDALEYGMEVSLAEARALLVRARRQVERGESPSKAKVEKRTALAEAVTFGGW
HHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
VEAYFKHKGDPKSGAERLADSTLAMRRSVYC
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA