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The map label for this gene is rpsU [H]

Identifier: 162148855

GI number: 162148855

Start: 3180572

End: 3180775

Strand: Direct

Name: rpsU [H]

Synonym: GDI_3084

Alternate gene names: 162148855

Gene position: 3180572-3180775 (Clockwise)

Preceding gene: 162148849

Following gene: 162148873

Centisome position: 80.64

GC content: 61.27

Gene sequence:

>204_bases
GTGCAGGTTCTCGTTCGCGACAACAATGTCGACCAGGCTCTCAAGGCGCTCAAGAAGAAGATGCAGCGTGAAGGCATCTT
CCGTGAAATGAAGCTGCGTCGCCACTACGAAAAGCCGTCCGAGCGCAAGGCGCGCGAGGCTGCCGAAGCTGTGCGCCGCG
CCCGCAAGATGGAGCGCAAGCGCCTGGAGCGCGAAGGGTTCTAA

Upstream 100 bases:

>100_bases
CACTCGGGAATCGCATGCAGGGCTGGGCCTTGGGCGGTCATCCCGCCATGACGGATTTCGTGGCCGATCAGGACAGCCAC
AAACAGGAGTTGACGACCAA

Downstream 100 bases:

>100_bases
TCTGCCCCTCCGGGTCAGTCCGAATCAGAAAGGCCGGCATCCTGGGGATGCCGGCCTTTTCCATATCTGTTGTCCCAAAA
GGCCGGGCCCTGTCCGGGCC

Product: 30S ribosomal protein S21

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MQVLVRDNNVDQALKALKKKMQREGIFREMKLRRHYEKPSERKAREAAEAVRRARKMERKRLEREGF

Sequences:

>Translated_67_residues
MQVLVRDNNVDQALKALKKKMQREGIFREMKLRRHYEKPSERKAREAAEAVRRARKMERKRLEREGF
>Mature_67_residues
MQVLVRDNNVDQALKALKKKMQREGIFREMKLRRHYEKPSERKAREAAEAVRRARKMERKRLEREGF

Specific function: Unknown

COG id: COG0828

COG function: function code J; Ribosomal protein S21

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S21P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001911
- InterPro:   IPR018278
- ProDom:   PD005521 [H]

Pfam domain/function: PF01165 Ribosomal_S21 [H]

EC number: NA

Molecular weight: Translated: 8198; Mature: 8198

Theoretical pI: Translated: 11.57; Mature: 11.57

Prosite motif: PS01181 RIBOSOMAL_S21

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVLVRDNNVDQALKALKKKMQREGIFREMKLRRHYEKPSERKAREAAEAVRRARKMERK
CCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RLEREGF
HHHHCCC
>Mature Secondary Structure
MQVLVRDNNVDQALKALKKKMQREGIFREMKLRRHYEKPSERKAREAAEAVRRARKMERK
CCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RLEREGF
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA