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The map label for this gene is ydiK [C]

Identifier: 162148843

GI number: 162148843

Start: 3170140

End: 3171285

Strand: Direct

Name: ydiK [C]

Synonym: GDI_3072

Alternate gene names: 162148843

Gene position: 3170140-3171285 (Clockwise)

Preceding gene: 162148842

Following gene: 162148849

Centisome position: 80.38

GC content: 67.89

Gene sequence:

>1146_bases
ATGACGGATCAGCCCCCCTCGCCCCTTCTGCCGCCTCCCGACCGCTCCCCCTTCCGCCTGATGCGCGAACGCCATCGCGT
GCAGCGCGTCGCCCGCTTCCTGCTGGCGATGTTCTTCACCCTGCTGGCGCTCTACACGATCCGGGGCTTCCTGCCGTCCC
TGATCTGGGGCGGGATTTTCGCCATCGTGGCCTGGCCGCTCTATGCCGCCACGCGGGAACGGTGGAAATCGCTGCCGGGC
GGCACGATCCTGCCGCTGCTGTTCACCACCGGGATCGCCCTGATCTTCCTGGTGCCGATGGGATTGTTCGCCCTGGAAGC
CGCGCGTGAGGCCCAGAGCGTCGTGACCTGGGCGAACGAGGCCCGGCATTCCGGCATGCCCGTGCCCGGCTGGATCCAGC
GCCTGCCCCTGGGCTCCGCTACGCTGGCCGGCTGGTGGCAGGACCACCTGGCGAATCCGGACGACGTGTCGGACCTGCTG
CATTCGTTCAATATCGGGCATGGCATGCAGGTGACGCAGCGCGTCGGGACGCAGATCTTCCATCGCGGCGTGCTGTTCAT
CTTCGCGATCCTGACCCTGTTCTTCCTGCTGAAGGACGGCGAAAGCGTGACCCGCCAGTGCCTGGTCGTCTCGCGCCGGG
CCTTCGGCAAGCGGGGCGAGACCATCGCCCAGCAGATCATCGCCTCGATCCACGGGACGGTGGCGGGCCTGGTGCTGGTG
GGCCTGGGTGAAGGCGCGCTGATGGGGGTGGCCTACCTGATCGCGGGCGCTCAGCATCCGTTCCTGTTCGGCGTGTTCAC
GGCCGTCGCGGCCATGATCCCGTTCTGCGCCGTCATCGCCGTGGCGGCGGTGACGCTGATGCTGCTGGTCAAGGGGGCGA
CGATCGCCGCCATCGCCATCCTGGCGCTGGGGCTGGCCGTCATTTTCATCGCCGACCATTTCGTCCGGCCCGCGCTGATC
GGCGGATCGACCCAGATGCCGTTCCTGTGGGTCCTGACCGGCATCCTGGGCGGCGTGGAAAGCTGGAACCTGCTGGGCCT
CTTCGTGGGCCCGGCCATCATGTCCGTCCTGCACCTGCTGTGGCGCAACTGGACGCGCGACCGCGTCCAGGATGGACTGC
GGGAAGAGGCTGACGATTTGTGCTGA

Upstream 100 bases:

>100_bases
ATCCAGGCCTTCGCCATCTGGGCGGTGGATACGACCGACCATACGAGAACCGAATGAGCGAGACGGACATGAAACAGGCA
TCCGCCCAACGAGGAACAGC

Downstream 100 bases:

>100_bases
AAATGGTCGCAGACGGAGATATCGGGCAGGCGGGATTCGAACCCACGACCCCCAGTCCCCCAGACTGATGCGCTACCAGG
CTGCGCTACTGCCCGTCCGT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MTDQPPSPLLPPPDRSPFRLMRERHRVQRVARFLLAMFFTLLALYTIRGFLPSLIWGGIFAIVAWPLYAATRERWKSLPG
GTILPLLFTTGIALIFLVPMGLFALEAAREAQSVVTWANEARHSGMPVPGWIQRLPLGSATLAGWWQDHLANPDDVSDLL
HSFNIGHGMQVTQRVGTQIFHRGVLFIFAILTLFFLLKDGESVTRQCLVVSRRAFGKRGETIAQQIIASIHGTVAGLVLV
GLGEGALMGVAYLIAGAQHPFLFGVFTAVAAMIPFCAVIAVAAVTLMLLVKGATIAAIAILALGLAVIFIADHFVRPALI
GGSTQMPFLWVLTGILGGVESWNLLGLFVGPAIMSVLHLLWRNWTRDRVQDGLREEADDLC

Sequences:

>Translated_381_residues
MTDQPPSPLLPPPDRSPFRLMRERHRVQRVARFLLAMFFTLLALYTIRGFLPSLIWGGIFAIVAWPLYAATRERWKSLPG
GTILPLLFTTGIALIFLVPMGLFALEAAREAQSVVTWANEARHSGMPVPGWIQRLPLGSATLAGWWQDHLANPDDVSDLL
HSFNIGHGMQVTQRVGTQIFHRGVLFIFAILTLFFLLKDGESVTRQCLVVSRRAFGKRGETIAQQIIASIHGTVAGLVLV
GLGEGALMGVAYLIAGAQHPFLFGVFTAVAAMIPFCAVIAVAAVTLMLLVKGATIAAIAILALGLAVIFIADHFVRPALI
GGSTQMPFLWVLTGILGGVESWNLLGLFVGPAIMSVLHLLWRNWTRDRVQDGLREEADDLC
>Mature_380_residues
TDQPPSPLLPPPDRSPFRLMRERHRVQRVARFLLAMFFTLLALYTIRGFLPSLIWGGIFAIVAWPLYAATRERWKSLPGG
TILPLLFTTGIALIFLVPMGLFALEAAREAQSVVTWANEARHSGMPVPGWIQRLPLGSATLAGWWQDHLANPDDVSDLLH
SFNIGHGMQVTQRVGTQIFHRGVLFIFAILTLFFLLKDGESVTRQCLVVSRRAFGKRGETIAQQIIASIHGTVAGLVLVG
LGEGALMGVAYLIAGAQHPFLFGVFTAVAAMIPFCAVIAVAAVTLMLLVKGATIAAIAILALGLAVIFIADHFVRPALIG
GSTQMPFLWVLTGILGGVESWNLLGLFVGPAIMSVLHLLWRNWTRDRVQDGLREEADDLC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=356, Percent_Identity=21.9101123595506, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41571; Mature: 41440

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQPPSPLLPPPDRSPFRLMRERHRVQRVARFLLAMFFTLLALYTIRGFLPSLIWGGIF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIVAWPLYAATRERWKSLPGGTILPLLFTTGIALIFLVPMGLFALEAAREAQSVVTWANE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARHSGMPVPGWIQRLPLGSATLAGWWQDHLANPDDVSDLLHSFNIGHGMQVTQRVGTQIF
HHHCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH
HRGVLFIFAILTLFFLLKDGESVTRQCLVVSRRAFGKRGETIAQQIIASIHGTVAGLVLV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
GLGEGALMGVAYLIAGAQHPFLFGVFTAVAAMIPFCAVIAVAAVTLMLLVKGATIAAIAI
HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LALGLAVIFIADHFVRPALIGGSTQMPFLWVLTGILGGVESWNLLGLFVGPAIMSVLHLL
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
WRNWTRDRVQDGLREEADDLC
HHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDQPPSPLLPPPDRSPFRLMRERHRVQRVARFLLAMFFTLLALYTIRGFLPSLIWGGIF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIVAWPLYAATRERWKSLPGGTILPLLFTTGIALIFLVPMGLFALEAAREAQSVVTWANE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARHSGMPVPGWIQRLPLGSATLAGWWQDHLANPDDVSDLLHSFNIGHGMQVTQRVGTQIF
HHHCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH
HRGVLFIFAILTLFFLLKDGESVTRQCLVVSRRAFGKRGETIAQQIIASIHGTVAGLVLV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
GLGEGALMGVAYLIAGAQHPFLFGVFTAVAAMIPFCAVIAVAAVTLMLLVKGATIAAIAI
HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LALGLAVIFIADHFVRPALIGGSTQMPFLWVLTGILGGVESWNLLGLFVGPAIMSVLHLL
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
WRNWTRDRVQDGLREEADDLC
HHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]