| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162148704
Identifier: 162148704
GI number: 162148704
Start: 3021353
End: 3022561
Strand: Direct
Name: 162148704
Synonym: GDI_2932
Alternate gene names: NA
Gene position: 3021353-3022561 (Clockwise)
Preceding gene: 162148703
Following gene: 162148705
Centisome position: 76.6
GC content: 68.07
Gene sequence:
>1209_bases ATGACACGCGCGCCTCTTACCCTGCCTGTCATCCGGAGGATCGTTCCGGGGACGCTGGACCGCTACCTGATCGGACAGAT GCTGCCGCCGTTCCTGCTGTCGCTGGGGGTGGTGATGACGGCCCTGCTGCTGGAACGGCTGCTGACGCTGCTGAACGTGC TGGCGTCCGATGGCGGGACGCTGAAGATCTTCGCCGGCCTGTTGGCCGACCTGGTGCCGCATTACCTGGGGCTGGCACTG CCGGCGGCCATCTGCGTCAGCGTCTTCTCGGTCGTGCGGCGCATGAGCCAGAACAACGAAATCGATGCGCTGATGGCCAG CGGGGTGTCGCTGCTGCGAATCGCCCGCCCGTTCGTCGTCATGGGGGCGGTGCTGGGGCTGGTCGGGTTCTCGCTGTACG GATTCATCCAGCCCTATGCCCGCTATGATTTCCGGCAGGCGCTGTATATCGCCAGCCATGCGGGCTGGACGCCGCACCTG CAGGCGCGGATGTTCGCGGCCCCGTCCGACACGCTGATGCTGACCGCCGACCAGGTCCAGGGGGCGGGAACCCGGCTGCG CCGCGTCTTCATCCGCGACAAGAGCGCCGGGCTGGAACGCGACATCACCGCCGACAGCGGCAGGCTGCTGATGACCGACG ACGGCACGACCGTCCGGCTGGACCTGGCGCATGGCGTCATTGTCACCGACCGCAATGACGACCGCCCGACCCTGACGACG TTCGACACCACGACCCGCTTCTTCCAGACCAGCAGCAAGGCCCATGCCTTCCGCAACCGGGGCAATGACGAGCGCGAACT GACCGTCCTGGAACTGCGTCACGGCATCCGCCACCGCGACCTGGCCATTCGCCGCACCCATCTGGTGGCCGAACTGCATT TCCGCCTGGCCCGGGCCATGGCGATTCCCTTCATCCCGATCCTGGCCTGCGCGCTGGCCGGGATGGCCAAGCGGCAGCGG CACAATACGGGGCTGGCGATCGCCGCGATCAGCCTGGTCGGGTTCGATCACGCACTGCAACTGGGACTGAGCCTGGTCGC CAGCCGGTCGATGTCGCCATGGCTGGTCATCTGGGGGCCGTTCGCGGTCTTCGGCTTCGCGTGCGTCTGGCTGATCCTGC GCCGGGCCGGATCGGCGGGCAAGCGGCAATCGCGACTGCGGCTGCTGGGCCGGCTTCCGCACCGCATGGCGGCAGGCCTG CCGCGATGA
Upstream 100 bases:
>100_bases CGCCGTATCGTCGGCTTTGACCAGCCGGTCCGGGCGCTGCCGCCCTGGTCCTTCGATGTCTATCGCGTCCCGCGACCGAT CTGATTATGTGTTAGGCGAC
Downstream 100 bases:
>100_bases GGCGCCCCCCCCATGACCACGCCGGACCGCCGATCGGCGGGGTGCTGACCCGCTACCTGACGCGCGAACTGGCCGGGCGT ATCCTGACGGCGGGGGCGAT
Product: permease
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ; Transporter YjgP/YjgQ; YjgP/YjgQ Permease; Permease YjgP
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MTRAPLTLPVIRRIVPGTLDRYLIGQMLPPFLLSLGVVMTALLLERLLTLLNVLASDGGTLKIFAGLLADLVPHYLGLAL PAAICVSVFSVVRRMSQNNEIDALMASGVSLLRIARPFVVMGAVLGLVGFSLYGFIQPYARYDFRQALYIASHAGWTPHL QARMFAAPSDTLMLTADQVQGAGTRLRRVFIRDKSAGLERDITADSGRLLMTDDGTTVRLDLAHGVIVTDRNDDRPTLTT FDTTTRFFQTSSKAHAFRNRGNDERELTVLELRHGIRHRDLAIRRTHLVAELHFRLARAMAIPFIPILACALAGMAKRQR HNTGLAIAAISLVGFDHALQLGLSLVASRSMSPWLVIWGPFAVFGFACVWLILRRAGSAGKRQSRLRLLGRLPHRMAAGL PR
Sequences:
>Translated_402_residues MTRAPLTLPVIRRIVPGTLDRYLIGQMLPPFLLSLGVVMTALLLERLLTLLNVLASDGGTLKIFAGLLADLVPHYLGLAL PAAICVSVFSVVRRMSQNNEIDALMASGVSLLRIARPFVVMGAVLGLVGFSLYGFIQPYARYDFRQALYIASHAGWTPHL QARMFAAPSDTLMLTADQVQGAGTRLRRVFIRDKSAGLERDITADSGRLLMTDDGTTVRLDLAHGVIVTDRNDDRPTLTT FDTTTRFFQTSSKAHAFRNRGNDERELTVLELRHGIRHRDLAIRRTHLVAELHFRLARAMAIPFIPILACALAGMAKRQR HNTGLAIAAISLVGFDHALQLGLSLVASRSMSPWLVIWGPFAVFGFACVWLILRRAGSAGKRQSRLRLLGRLPHRMAAGL PR >Mature_401_residues TRAPLTLPVIRRIVPGTLDRYLIGQMLPPFLLSLGVVMTALLLERLLTLLNVLASDGGTLKIFAGLLADLVPHYLGLALP AAICVSVFSVVRRMSQNNEIDALMASGVSLLRIARPFVVMGAVLGLVGFSLYGFIQPYARYDFRQALYIASHAGWTPHLQ ARMFAAPSDTLMLTADQVQGAGTRLRRVFIRDKSAGLERDITADSGRLLMTDDGTTVRLDLAHGVIVTDRNDDRPTLTTF DTTTRFFQTSSKAHAFRNRGNDERELTVLELRHGIRHRDLAIRRTHLVAELHFRLARAMAIPFIPILACALAGMAKRQRH NTGLAIAAISLVGFDHALQLGLSLVASRSMSPWLVIWGPFAVFGFACVWLILRRAGSAGKRQSRLRLLGRLPHRMAAGLP R
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44295; Mature: 44164
Theoretical pI: Translated: 11.76; Mature: 11.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAPLTLPVIRRIVPGTLDRYLIGQMLPPFLLSLGVVMTALLLERLLTLLNVLASDGGT CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LKIFAGLLADLVPHYLGLALPAAICVSVFSVVRRMSQNNEIDALMASGVSLLRIARPFVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHH MGAVLGLVGFSLYGFIQPYARYDFRQALYIASHAGWTPHLQARMFAAPSDTLMLTADQVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCCEEEEHHHHC GAGTRLRRVFIRDKSAGLERDITADSGRLLMTDDGTTVRLDLAHGVIVTDRNDDRPTLTT CCHHHHHHHHEECCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCEEEECCCCCCCCEEE FDTTTRFFQTSSKAHAFRNRGNDERELTVLELRHGIRHRDLAIRRTHLVAELHFRLARAM EHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AIPFIPILACALAGMAKRQRHNTGLAIAAISLVGFDHALQLGLSLVASRSMSPWLVIWGP HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECH FAVFGFACVWLILRRAGSAGKRQSRLRLLGRLPHRMAAGLPR HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCCCCC >Mature Secondary Structure TRAPLTLPVIRRIVPGTLDRYLIGQMLPPFLLSLGVVMTALLLERLLTLLNVLASDGGT CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LKIFAGLLADLVPHYLGLALPAAICVSVFSVVRRMSQNNEIDALMASGVSLLRIARPFVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHH MGAVLGLVGFSLYGFIQPYARYDFRQALYIASHAGWTPHLQARMFAAPSDTLMLTADQVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCCEEEEHHHHC GAGTRLRRVFIRDKSAGLERDITADSGRLLMTDDGTTVRLDLAHGVIVTDRNDDRPTLTT CCHHHHHHHHEECCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCEEEECCCCCCCCEEE FDTTTRFFQTSSKAHAFRNRGNDERELTVLELRHGIRHRDLAIRRTHLVAELHFRLARAM EHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AIPFIPILACALAGMAKRQRHNTGLAIAAISLVGFDHALQLGLSLVASRSMSPWLVIWGP HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECH FAVFGFACVWLILRRAGSAGKRQSRLRLLGRLPHRMAAGLPR HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA