| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is kbl [H]
Identifier: 162148700
GI number: 162148700
Start: 3017127
End: 3018329
Strand: Direct
Name: kbl [H]
Synonym: GDI_2928
Alternate gene names: 162148700
Gene position: 3017127-3018329 (Clockwise)
Preceding gene: 162148699
Following gene: 162148703
Centisome position: 76.5
GC content: 67.5
Gene sequence:
>1203_bases ATGTCGATCTTCAGCAAATATGATGGGCTGTCCCGGTCGCTCGCGGCCGTGACGGCGGGAGGAGGCCGGAATCCATTTTC CGTCGTCATCGACCGTCCCCTGTCCTCGACCGTGGGGCTGATTGAGGGACGGGAGACGCTGCTGTTCGGCACCAACAACT ATCTGGGCCTCAGCCAGTCCGAAGCGGCGATCGAGGCCGCGATCGAGACATTGCGGACCCATGGGGTCGGCACCACCGGA TCGCGGATCGCCAACGGAACCCAGGGACTGCACCGCCAGTTGGAGGAGCGTATCGCCGGCTTCTTCCGGCGCCGCCACTG CATGGTGTTTTCGACCGGGTACCAGGCCAATCTGGGCACGATCTCGGCCCTGGCCGGCAAGGACGATTACCTGCTGCTGG ATGCCGACAGCCATGCCAGCATCTATGACGGCAGCCGGCTGAGCCAGGCGCAGGTCATCCGTTTCCGTCACAACGACCCC GACGACCTGCACAAGCGCCTGCGCCGCCTGGACGGCACGCCCGGCGCCAAGCTGATCGTCGTCGAAGGCATCTATTCCAT GATGGGCGACGTGGTCCCGATGGCCGAATTCGCCGCCGTGAAGCGCGAGACCGGGGCGTGGCTGCTGGCGGACGAAGCCC ATTCGTTCGGCGTCATGGGCGCGCATGGCCGCGGAGTGGCCGAGTCCGACGGGGTCGAAAGCGACATCGACTTCGTGGTC GGCACCTTCTCCAAGAGCCTGGGCACGGTCGGCGGCTATTGCGTGTCGGACCATGACGGGCTGGACCTGATCCGCCTGTG CTCGCGGCCGTATATGTTCACAGCCTCGCTGCCGCCGGACGTCATCGCGGCCACCATGGCGGCGCTGGACGAACTGGAGC GGCGGCCGGAACTGCGGCACGCGCTGATGGACAATGCCAGGCGCCTGCATGCCGGACTGAATGCCGCCGGATTGCGCACC GGCCCGCAGGCCAGCCCGGTCGTGTCGGTGGTGCTGGACGAGGTCGGCCAGGCGGTCCATTTCTGGAACCGGCTGCTGGA CCTGGGCGTGTACGTGAATCTCAGCCTGCCGCCGGCCACCCCGGACCAGCACCCGCTGCTGCGCACGTCGGTCATGGCGA CGCACAGCCCGGCGCAGGTCGATCGTGCCGTGGAGATCTTCGCCACCGTGGCCGGGGAAATGGGCCTGCGCGCGGCCGGG TAG
Upstream 100 bases:
>100_bases TTCGCTCGACGTGTCCGTCCCGCTCGACCGGCTTGCCGACATTCGCACCATCGACGACCTGGCCGCCTGCATCGTGTCCC TGAAACAGGCCGGCTGAGCC
Downstream 100 bases:
>100_bases CGCGTTACCGCCGTGTAAAGATGCCTGCCTGCCGCAGCTTCCACAACAGCCACGGCAGGCAGAGCAGCGGATGCCGCGCC GCGAAGGGCGGAATTTTCAG
Product: 2-amino-3-ketobutyrate coenzyme A ligase
Products: NA
Alternate protein names: AONS; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MSIFSKYDGLSRSLAAVTAGGGRNPFSVVIDRPLSSTVGLIEGRETLLFGTNNYLGLSQSEAAIEAAIETLRTHGVGTTG SRIANGTQGLHRQLEERIAGFFRRRHCMVFSTGYQANLGTISALAGKDDYLLLDADSHASIYDGSRLSQAQVIRFRHNDP DDLHKRLRRLDGTPGAKLIVVEGIYSMMGDVVPMAEFAAVKRETGAWLLADEAHSFGVMGAHGRGVAESDGVESDIDFVV GTFSKSLGTVGGYCVSDHDGLDLIRLCSRPYMFTASLPPDVIAATMAALDELERRPELRHALMDNARRLHAGLNAAGLRT GPQASPVVSVVLDEVGQAVHFWNRLLDLGVYVNLSLPPATPDQHPLLRTSVMATHSPAQVDRAVEIFATVAGEMGLRAAG
Sequences:
>Translated_400_residues MSIFSKYDGLSRSLAAVTAGGGRNPFSVVIDRPLSSTVGLIEGRETLLFGTNNYLGLSQSEAAIEAAIETLRTHGVGTTG SRIANGTQGLHRQLEERIAGFFRRRHCMVFSTGYQANLGTISALAGKDDYLLLDADSHASIYDGSRLSQAQVIRFRHNDP DDLHKRLRRLDGTPGAKLIVVEGIYSMMGDVVPMAEFAAVKRETGAWLLADEAHSFGVMGAHGRGVAESDGVESDIDFVV GTFSKSLGTVGGYCVSDHDGLDLIRLCSRPYMFTASLPPDVIAATMAALDELERRPELRHALMDNARRLHAGLNAAGLRT GPQASPVVSVVLDEVGQAVHFWNRLLDLGVYVNLSLPPATPDQHPLLRTSVMATHSPAQVDRAVEIFATVAGEMGLRAAG >Mature_399_residues SIFSKYDGLSRSLAAVTAGGGRNPFSVVIDRPLSSTVGLIEGRETLLFGTNNYLGLSQSEAAIEAAIETLRTHGVGTTGS RIANGTQGLHRQLEERIAGFFRRRHCMVFSTGYQANLGTISALAGKDDYLLLDADSHASIYDGSRLSQAQVIRFRHNDPD DLHKRLRRLDGTPGAKLIVVEGIYSMMGDVVPMAEFAAVKRETGAWLLADEAHSFGVMGAHGRGVAESDGVESDIDFVVG TFSKSLGTVGGYCVSDHDGLDLIRLCSRPYMFTASLPPDVIAATMAALDELERRPELRHALMDNARRLHAGLNAAGLRTG PQASPVVSVVLDEVGQAVHFWNRLLDLGVYVNLSLPPATPDQHPLLRTSVMATHSPAQVDRAVEIFATVAGEMGLRAAG
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A, and carbon dioxide [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. BioF subfamily [H]
Homologues:
Organism=Homo sapiens, GI284448556, Length=359, Percent_Identity=33.1476323119777, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI7657118, Length=345, Percent_Identity=33.6231884057971, Blast_Score=198, Evalue=6e-51, Organism=Homo sapiens, GI83977444, Length=367, Percent_Identity=32.9700272479564, Blast_Score=185, Evalue=7e-47, Organism=Homo sapiens, GI83977442, Length=367, Percent_Identity=32.9700272479564, Blast_Score=185, Evalue=8e-47, Organism=Homo sapiens, GI83977440, Length=367, Percent_Identity=32.9700272479564, Blast_Score=184, Evalue=9e-47, Organism=Homo sapiens, GI4758668, Length=353, Percent_Identity=33.1444759206799, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI5454084, Length=389, Percent_Identity=29.305912596401, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI119220554, Length=359, Percent_Identity=31.1977715877437, Blast_Score=162, Evalue=4e-40, Organism=Homo sapiens, GI4502025, Length=366, Percent_Identity=30.8743169398907, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI40316939, Length=366, Percent_Identity=30.8743169398907, Blast_Score=150, Evalue=2e-36, Organism=Escherichia coli, GI1790046, Length=373, Percent_Identity=32.4396782841823, Blast_Score=208, Evalue=5e-55, Organism=Escherichia coli, GI1786993, Length=349, Percent_Identity=30.6590257879656, Blast_Score=154, Evalue=1e-38, Organism=Caenorhabditis elegans, GI71994529, Length=372, Percent_Identity=32.258064516129, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI32566772, Length=368, Percent_Identity=33.1521739130435, Blast_Score=173, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17560914, Length=353, Percent_Identity=28.8951841359773, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17560912, Length=353, Percent_Identity=28.8951841359773, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI71982617, Length=266, Percent_Identity=30.4511278195489, Blast_Score=123, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71982625, Length=266, Percent_Identity=30.4511278195489, Blast_Score=123, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6320267, Length=363, Percent_Identity=31.404958677686, Blast_Score=158, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6320438, Length=315, Percent_Identity=28.2539682539683, Blast_Score=130, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6323954, Length=300, Percent_Identity=27.3333333333333, Blast_Score=125, Evalue=1e-29, Organism=Drosophila melanogaster, GI24662918, Length=348, Percent_Identity=33.6206896551724, Blast_Score=222, Evalue=3e-58, Organism=Drosophila melanogaster, GI24653280, Length=387, Percent_Identity=29.9741602067183, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24653276, Length=387, Percent_Identity=29.9741602067183, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24653278, Length=387, Percent_Identity=29.9741602067183, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI17137420, Length=310, Percent_Identity=31.9354838709677, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI17136286, Length=378, Percent_Identity=31.2169312169312, Blast_Score=156, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022834 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR004723 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.47 [H]
Molecular weight: Translated: 42890; Mature: 42759
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFSKYDGLSRSLAAVTAGGGRNPFSVVIDRPLSSTVGLIEGRETLLFGTNNYLGLSQS CCCCHHHCCCHHHHHHEECCCCCCCEEEEEECCCHHHHHHCCCCEEEEEECCCCCCCCCH EAAIEAAIETLRTHGVGTTGSRIANGTQGLHRQLEERIAGFFRRRHCMVFSTGYQANLGT HHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCC ISALAGKDDYLLLDADSHASIYDGSRLSQAQVIRFRHNDPDDLHKRLRRLDGTPGAKLIV EEEECCCCCEEEEECCCCCCCCCCCCCCHHHEEEECCCCHHHHHHHHHHHCCCCCCEEEE VEGIYSMMGDVVPMAEFAAVKRETGAWLLADEAHSFGVMGAHGRGVAESDGVESDIDFVV HHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHH GTFSKSLGTVGGYCVSDHDGLDLIRLCSRPYMFTASLPPDVIAATMAALDELERRPELRH HHHHHHHCCCCCEEECCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCHHHHH ALMDNARRLHAGLNAAGLRTGPQASPVVSVVLDEVGQAVHFWNRLLDLGVYVNLSLPPAT HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC PDQHPLLRTSVMATHSPAQVDRAVEIFATVAGEMGLRAAG CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SIFSKYDGLSRSLAAVTAGGGRNPFSVVIDRPLSSTVGLIEGRETLLFGTNNYLGLSQS CCCHHHCCCHHHHHHEECCCCCCCEEEEEECCCHHHHHHCCCCEEEEEECCCCCCCCCH EAAIEAAIETLRTHGVGTTGSRIANGTQGLHRQLEERIAGFFRRRHCMVFSTGYQANLGT HHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCC ISALAGKDDYLLLDADSHASIYDGSRLSQAQVIRFRHNDPDDLHKRLRRLDGTPGAKLIV EEEECCCCCEEEEECCCCCCCCCCCCCCHHHEEEECCCCHHHHHHHHHHHCCCCCCEEEE VEGIYSMMGDVVPMAEFAAVKRETGAWLLADEAHSFGVMGAHGRGVAESDGVESDIDFVV HHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHH GTFSKSLGTVGGYCVSDHDGLDLIRLCSRPYMFTASLPPDVIAATMAALDELERRPELRH HHHHHHHCCCCCEEECCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCHHHHH ALMDNARRLHAGLNAAGLRTGPQASPVVSVVLDEVGQAVHFWNRLLDLGVYVNLSLPPAT HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC PDQHPLLRTSVMATHSPAQVDRAVEIFATVAGEMGLRAAG CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA