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The map label for this gene is trbE [H]

Identifier: 162148683

GI number: 162148683

Start: 2995542

End: 2997977

Strand: Reverse

Name: trbE [H]

Synonym: GDI_2911

Alternate gene names: 162148683

Gene position: 2997977-2995542 (Counterclockwise)

Preceding gene: 162148684

Following gene: 162148682

Centisome position: 76.01

GC content: 63.96

Gene sequence:

>2436_bases
ATGATGTCCCTTGGCGAATACCGCAACCGAGCCGCTCTCCTGTCCGATTACCTGCCATGGGCGGCGCTGGTCGAACGCGG
CGTGGTGCTGAACAAGGACGGTTCCTTCCAGCGCACCGCGCGCATTCGTGGCCCCGATCTTGATTCGGCCACGCCCGCCG
AATTGGTGGGTGTGACCGGCCGTCTCAACAACGCCCTGCGCCGTCTCGGCTCCGGCTGGGCGGTGTTCGTCGAGGCGCAA
CGTGTGCCCGCGACCCTCTACCCGGAGAGCGATTTCCCCGATGCCGCCAGCCAGATGGTCGATCTGGAGCGGCGGGAGCA
GTTCGAGGATGAGGGGGCGCATTTCGAGAGCCGCTATTTTCTGACCTTGGTCTGGCTCCCCCCGGCAGAAAGCGCCAATC
GGGCGGCCAGGTTCCTGTTCGAAGGTCGGGAGCGCGACGGTCCCGACCCGCACGGCATGCTCCATACGTTCGTGGATCGC
AGCGATCGTCTGCTGGCTCTGCTGGACGGGTTCATGCCGGAGGCCGCCTGGCTCGATGACGGCGAAACCCTGACCTACCT
GCATTCCACTATTTCCACGCGCAACCAGCGGGTCCGCGTGCCGGAAATTCCGATGCACCTTGACGCCCTGCTGGTGGACC
AGCCGCTCGCGGGTGGTCTGGAACCGAAACTCGGTGATGCGTATCTGAAAACCCTGACCATCACCGGTTTCCCGAGCCGG
ACCTTCCCCGGGATCCTCGACGATCTGAATCGCCTCGCCATGCCCTATCGCTGGTCCACGCGGGCGATCTTGCTCGACAA
GACGGACGCCACCAAGGTTCTGACGAAGATCCGGCGGCAGTGGTTCGCAAAGCGCAAGAGCATTGCAGCCATTGTCCGCG
AGGTGATGACCAACGAGGCATCGGTGCTGGTGGACAACGACGCCGCCAACAAAGCCGCCGACGCCGATCTGGCATTGCAG
TCGCTCGGGGCCGACGATGTGGGCCAAGCCTATATCACCGCCACCGTCACGGTCTGGGATGGTTCTGTCAGCATCGCGGC
GGAGAAATTGCGTCTGGTGGAGAAAATCATCCAGGGGCGCGACTTCACCTGCATGACCGAGAGTCTGAACGCCGTGGAAG
CATGGCTCGGCTCTTTGCCCGGCCATGTTTACGCGAACGTCCGGCAACCGCCGGTCTCCACGCTGAATCTGGCGCATATG
ATTCCGCTCTCCGCCGTCTGGGCGGGGCCGGACCGGGATGTGCATTTCAAGGCGCCGCCGCTCTTCTACGGCAAGACCGC
CGGGGCCACGCCGTTCCGGTTTTCTCTCCATGCCAGTGACGTAGGGCACACGCTGATCGCGGGGCCGACAGGAGCAGGGA
AATCCGTGCTGCTGGCGCTGATGGCATTGCAGTTCCGCCGGTATATGGGAGCGCAGATCTTCGCCTTCGATTTCGGTGGC
TCCATGCGCGCCGCCACGCTCGGCATGGGCGGAGACTGGCACGATCTCGGGGGCGGTCTGACGGAGGATCAGGCTGATGG
TGTTCCCGCCGTCTCGCTCCAGCCGCTGGCGCGGATCGATGACCCGGACGAACGCAAATGGGCCAGCGAATGGCTCGGCC
AGATCCTTGTCGGCGAGGGCGTATCGCTCACGCCGGAGGTGAAGTCCTACCTCTGGTCAGCGCTGAATTCCCTGACGTCA
TCGCCGGTTCAGGAGCGGACCCTGTCCGGTCTGGTAGCGTTGCTCCAATCCAACGCGCTCAAGCAGGCTCTTGCCCCATA
CTGCCTTGGCGGTCCTTACGGACGGCTCCTTGACGCCGATAATGAGCGTCTGGGGGATGCCGATGTCGTGGTGTTCGAGA
CCGAAGGGTTGATCGGTTCGGGTGCCGCGTCTTCCGTGCTGTCCTACCTGTTCCACCGCATCGAAGGCCGCCTGGATGGC
CGACCGACCCTGCTGGTGATCGACGAGGGATGGCTTGTTCTGGACGACGGGAATTTCTCCGGTCAGTTGCGGGAGTGGCT
GAAAACCCTGCGCAAGAAAAATGCCAGCGTCATCTTCGCCACGCAGTCCCTGTCGGACATCGCAAACTCACCCATCGCGC
CAGCCGTGGTCGAAAGCTGCCCGACCCGGATCTTCCTGCCGAACGAGCGGGCGATCGAGCCGCAGATTATGGCCATCTAT
CGCGACTTCGGTCTGAACGATCGCCAGATCGCCATTATCGCCCGCGCCGCGTCGAAGCGGGAGTATTACTGCCAGACCCA
GCGTGGCAACCGCCTGTTCGAACTTGGGCTTGGTCCGGTGGCGCTGACGCTGTGCGCGGCCTCCGGCAAGGACGATCATA
AACTGATCGACCAGATGCTCGCGGAACACGGGCGTGCCGGATTTCTGCCCGCGTGGTTCGAGACGCGCGGCGTGTCCTGG
GCGGCCGACCTCCTGCGGGACGGAGGCGTGCCATGA

Upstream 100 bases:

>100_bases
CTTGCGGTCTGGGGTGCCAAGCGCGATCCGTTGTTCGTGGAGGTCGGGCGGCGGCATCTCCGCTACCCCGCCTGGCTCCG
GACGTGAGGAGGGCAGGGCG

Downstream 100 bases:

>100_bases
CAGAAAACTCTTTCCGGCTCTGGGCTGAATTTTTCGGTCGTGCGAGCGAAAAACATTTCCGCCGGGGTGTCCTTTTCACC
TCTGCAATGCTGGCGATTGG

Product: conjugal transfer ATPase TrbE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 811; Mature: 811

Protein sequence:

>811_residues
MMSLGEYRNRAALLSDYLPWAALVERGVVLNKDGSFQRTARIRGPDLDSATPAELVGVTGRLNNALRRLGSGWAVFVEAQ
RVPATLYPESDFPDAASQMVDLERREQFEDEGAHFESRYFLTLVWLPPAESANRAARFLFEGRERDGPDPHGMLHTFVDR
SDRLLALLDGFMPEAAWLDDGETLTYLHSTISTRNQRVRVPEIPMHLDALLVDQPLAGGLEPKLGDAYLKTLTITGFPSR
TFPGILDDLNRLAMPYRWSTRAILLDKTDATKVLTKIRRQWFAKRKSIAAIVREVMTNEASVLVDNDAANKAADADLALQ
SLGADDVGQAYITATVTVWDGSVSIAAEKLRLVEKIIQGRDFTCMTESLNAVEAWLGSLPGHVYANVRQPPVSTLNLAHM
IPLSAVWAGPDRDVHFKAPPLFYGKTAGATPFRFSLHASDVGHTLIAGPTGAGKSVLLALMALQFRRYMGAQIFAFDFGG
SMRAATLGMGGDWHDLGGGLTEDQADGVPAVSLQPLARIDDPDERKWASEWLGQILVGEGVSLTPEVKSYLWSALNSLTS
SPVQERTLSGLVALLQSNALKQALAPYCLGGPYGRLLDADNERLGDADVVVFETEGLIGSGAASSVLSYLFHRIEGRLDG
RPTLLVIDEGWLVLDDGNFSGQLREWLKTLRKKNASVIFATQSLSDIANSPIAPAVVESCPTRIFLPNERAIEPQIMAIY
RDFGLNDRQIAIIARAASKREYYCQTQRGNRLFELGLGPVALTLCAASGKDDHKLIDQMLAEHGRAGFLPAWFETRGVSW
AADLLRDGGVP

Sequences:

>Translated_811_residues
MMSLGEYRNRAALLSDYLPWAALVERGVVLNKDGSFQRTARIRGPDLDSATPAELVGVTGRLNNALRRLGSGWAVFVEAQ
RVPATLYPESDFPDAASQMVDLERREQFEDEGAHFESRYFLTLVWLPPAESANRAARFLFEGRERDGPDPHGMLHTFVDR
SDRLLALLDGFMPEAAWLDDGETLTYLHSTISTRNQRVRVPEIPMHLDALLVDQPLAGGLEPKLGDAYLKTLTITGFPSR
TFPGILDDLNRLAMPYRWSTRAILLDKTDATKVLTKIRRQWFAKRKSIAAIVREVMTNEASVLVDNDAANKAADADLALQ
SLGADDVGQAYITATVTVWDGSVSIAAEKLRLVEKIIQGRDFTCMTESLNAVEAWLGSLPGHVYANVRQPPVSTLNLAHM
IPLSAVWAGPDRDVHFKAPPLFYGKTAGATPFRFSLHASDVGHTLIAGPTGAGKSVLLALMALQFRRYMGAQIFAFDFGG
SMRAATLGMGGDWHDLGGGLTEDQADGVPAVSLQPLARIDDPDERKWASEWLGQILVGEGVSLTPEVKSYLWSALNSLTS
SPVQERTLSGLVALLQSNALKQALAPYCLGGPYGRLLDADNERLGDADVVVFETEGLIGSGAASSVLSYLFHRIEGRLDG
RPTLLVIDEGWLVLDDGNFSGQLREWLKTLRKKNASVIFATQSLSDIANSPIAPAVVESCPTRIFLPNERAIEPQIMAIY
RDFGLNDRQIAIIARAASKREYYCQTQRGNRLFELGLGPVALTLCAASGKDDHKLIDQMLAEHGRAGFLPAWFETRGVSW
AADLLRDGGVP
>Mature_811_residues
MMSLGEYRNRAALLSDYLPWAALVERGVVLNKDGSFQRTARIRGPDLDSATPAELVGVTGRLNNALRRLGSGWAVFVEAQ
RVPATLYPESDFPDAASQMVDLERREQFEDEGAHFESRYFLTLVWLPPAESANRAARFLFEGRERDGPDPHGMLHTFVDR
SDRLLALLDGFMPEAAWLDDGETLTYLHSTISTRNQRVRVPEIPMHLDALLVDQPLAGGLEPKLGDAYLKTLTITGFPSR
TFPGILDDLNRLAMPYRWSTRAILLDKTDATKVLTKIRRQWFAKRKSIAAIVREVMTNEASVLVDNDAANKAADADLALQ
SLGADDVGQAYITATVTVWDGSVSIAAEKLRLVEKIIQGRDFTCMTESLNAVEAWLGSLPGHVYANVRQPPVSTLNLAHM
IPLSAVWAGPDRDVHFKAPPLFYGKTAGATPFRFSLHASDVGHTLIAGPTGAGKSVLLALMALQFRRYMGAQIFAFDFGG
SMRAATLGMGGDWHDLGGGLTEDQADGVPAVSLQPLARIDDPDERKWASEWLGQILVGEGVSLTPEVKSYLWSALNSLTS
SPVQERTLSGLVALLQSNALKQALAPYCLGGPYGRLLDADNERLGDADVVVFETEGLIGSGAASSVLSYLFHRIEGRLDG
RPTLLVIDEGWLVLDDGNFSGQLREWLKTLRKKNASVIFATQSLSDIANSPIAPAVVESCPTRIFLPNERAIEPQIMAIY
RDFGLNDRQIAIIARAASKREYYCQTQRGNRLFELGLGPVALTLCAASGKDDHKLIDQMLAEHGRAGFLPAWFETRGVSW
AADLLRDGGVP

Specific function: Required For The Assembly Of Mature F-Pilin Subunits Into Extended F Pili. [C]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbE/virB4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004346
- InterPro:   IPR018145 [H]

Pfam domain/function: PF03135 CagE_TrbE_VirB [H]

EC number: NA

Molecular weight: Translated: 88734; Mature: 88734

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSLGEYRNRAALLSDYLPWAALVERGVVLNKDGSFQRTARIRGPDLDSATPAELVGVTG
CCCCHHHHHHHHHHHHCCCHHHHHHCCEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHH
RLNNALRRLGSGWAVFVEAQRVPATLYPESDFPDAASQMVDLERREQFEDEGAHFESRYF
HHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE
LTLVWLPPAESANRAARFLFEGRERDGPDPHGMLHTFVDRSDRLLALLDGFMPEAAWLDD
EEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCC
GETLTYLHSTISTRNQRVRVPEIPMHLDALLVDQPLAGGLEPKLGDAYLKTLTITGFPSR
CCEEHHHHHHHHCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCC
TFPGILDDLNRLAMPYRWSTRAILLDKTDATKVLTKIRRQWFAKRKSIAAIVREVMTNEA
CCCHHHHHHHHHCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVLVDNDAANKAADADLALQSLGADDVGQAYITATVTVWDGSVSIAAEKLRLVEKIIQGR
EEEEECCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCC
DFTCMTESLNAVEAWLGSLPGHVYANVRQPPVSTLNLAHMIPLSAVWAGPDRDVHFKAPP
CCEEHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHCCHHHEECCCCCCEEECCCC
LFYGKTAGATPFRFSLHASDVGHTLIAGPTGAGKSVLLALMALQFRRYMGAQIFAFDFGG
CEECCCCCCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCC
SMRAATLGMGGDWHDLGGGLTEDQADGVPAVSLQPLARIDDPDERKWASEWLGQILVGEG
CCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCC
VSLTPEVKSYLWSALNSLTSSPVQERTLSGLVALLQSNALKQALAPYCLGGPYGRLLDAD
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC
NERLGDADVVVFETEGLIGSGAASSVLSYLFHRIEGRLDGRPTLLVIDEGWLVLDDGNFS
CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCCCC
GQLREWLKTLRKKNASVIFATQSLSDIANSPIAPAVVESCPTRIFLPNERAIEPQIMAIY
HHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCHHHHHHCCCEEECCCCCCCCHHHHHHH
RDFGLNDRQIAIIARAASKREYYCQTQRGNRLFELGLGPVALTLCAASGKDDHKLIDQML
HHCCCCCCEEEEEEECCCCCCEEEECCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHH
AEHGRAGFLPAWFETRGVSWAADLLRDGGVP
HHCCCCCCCCHHHHHCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MMSLGEYRNRAALLSDYLPWAALVERGVVLNKDGSFQRTARIRGPDLDSATPAELVGVTG
CCCCHHHHHHHHHHHHCCCHHHHHHCCEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHH
RLNNALRRLGSGWAVFVEAQRVPATLYPESDFPDAASQMVDLERREQFEDEGAHFESRYF
HHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE
LTLVWLPPAESANRAARFLFEGRERDGPDPHGMLHTFVDRSDRLLALLDGFMPEAAWLDD
EEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCC
GETLTYLHSTISTRNQRVRVPEIPMHLDALLVDQPLAGGLEPKLGDAYLKTLTITGFPSR
CCEEHHHHHHHHCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCC
TFPGILDDLNRLAMPYRWSTRAILLDKTDATKVLTKIRRQWFAKRKSIAAIVREVMTNEA
CCCHHHHHHHHHCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVLVDNDAANKAADADLALQSLGADDVGQAYITATVTVWDGSVSIAAEKLRLVEKIIQGR
EEEEECCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCC
DFTCMTESLNAVEAWLGSLPGHVYANVRQPPVSTLNLAHMIPLSAVWAGPDRDVHFKAPP
CCEEHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHCCHHHEECCCCCCEEECCCC
LFYGKTAGATPFRFSLHASDVGHTLIAGPTGAGKSVLLALMALQFRRYMGAQIFAFDFGG
CEECCCCCCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCC
SMRAATLGMGGDWHDLGGGLTEDQADGVPAVSLQPLARIDDPDERKWASEWLGQILVGEG
CCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCC
VSLTPEVKSYLWSALNSLTSSPVQERTLSGLVALLQSNALKQALAPYCLGGPYGRLLDAD
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC
NERLGDADVVVFETEGLIGSGAASSVLSYLFHRIEGRLDGRPTLLVIDEGWLVLDDGNFS
CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCCCC
GQLREWLKTLRKKNASVIFATQSLSDIANSPIAPAVVESCPTRIFLPNERAIEPQIMAIY
HHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCHHHHHHCCCEEECCCCCCCCHHHHHHH
RDFGLNDRQIAIIARAASKREYYCQTQRGNRLFELGLGPVALTLCAASGKDDHKLIDQML
HHCCCCCCEEEEEEECCCCCCEEEECCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHH
AEHGRAGFLPAWFETRGVSWAADLLRDGGVP
HHCCCCCCCCHHHHHCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]