| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is thiF [C]
Identifier: 162148664
GI number: 162148664
Start: 2977237
End: 2978994
Strand: Reverse
Name: thiF [C]
Synonym: GDI_2891
Alternate gene names: 162148664
Gene position: 2978994-2977237 (Counterclockwise)
Preceding gene: 162148665
Following gene: 162148661
Centisome position: 75.53
GC content: 65.76
Gene sequence:
>1758_bases GTGCCCGAGCGCCTCGACCACGCGACGATCTCCAGCGACTATCCCGGCCGTGACTGGATCGTCGCCGCCTGGCGGATCAG CGTGGTGTTTTCCGATGGAGTAACCCGCCGAATCGACCTTGTGGCCGGCGCGCAGTTTCCGACGACGCCGATCAGGACCG CGCTGGTCGACCATCCCGAGTCCATGACCTGGCCGCACGTCGAAAGCGACGGCATCCTGTGCCTATTGCCGAACATGGCC GAGTGGGATCCCGATGATCCTTCAGAGGTCGCGATGGATCTACTAAATCGCTCGGTCCGGCTGGTCGAGGAGTTACTTGA GGGCAGCATCGTCGAGCGAGACTTCCGCGACGAGTTTGTCACCTACTGGGGTTACCGGGTGCATTCGCAGGGCGAAAACC TGTTCAGCCTGGTCGCGCCCGAGCCGCCCTCGCGGGTGGTGCGTGTGTGGCGCGGCAAGAATCTCGAAGTCGCCGGAGAG GACCAGGACGCGATTGCGAAATGGGTGTGTCACCGCTTTGGCGACAAGACTCCGGTGAAGACGGAAGCGGCCGCGTTCCT CTGGCTCGACGAACCACTGCTTCCTGCAGAATACCCAGAGACGGCCGCCGATCTGTATCATTTGGGGGAGCGGATCGCTG GCGAGGCGAGGACGGTCTTGGAGCAGGCGGCGAAAGGCGAGCCGGATGAGGTGCTGGTGCTGCTCGGCGCTATTGGACGC GGGGGCTCCGCATCGATTGGGGTGAAGGCGCTCAACCCAAAGCGACGCAAAGGCCGGCCGCGCACTCCCGACGAACCCCT CTCCGTGGGATTCCGACCCGGCCATACCCCACAGCCGCTGCTGCTCGACCGCTTTTTCGGCACGGCTCCGGTCGTCAGGA CGCTAGTGCAGCGGGCCGATGCCGATTGGGTGCATGGGCGCGGTCAGGATGCCCGCACGCGCCGGCTGCTCGGCGCGACG GTCGTGGTGATCGGCTGCGGTTCGGTCGGGGCACCGGTCGCCTGCGCGCTGGCCCAAGCGGGTGTCGGCCGCCTCATCCT AGTCGATCCAGAACGGTTGACCTGGCCCAACGTCGGGCGCCATCCGCTCGGCGCCACCGCCGTTGGGCGCAACAAGGCCG AAGCCTTGGCCGAACGACTGCAGGTCGACTTTCCGCATCTGAATGTCGAACATCGCGCTTTCGGCCTGCATCAGCTGATC GCGCGCAACGAGGATCTTCTCGCAGCGACCGACATGATCGTGGCTGCGACCGGAAATTGGGTCGCCGAGAGTGCGCTCAA TCGCTGGCATGTCCGGCAAGGGCGCGCACGGCCCGTTGTCTACGGGTGGACCGAGGCGCATGCCTGCGCTGGCCACGCCG TCGCCATCGGCCAGAGGGGGGGCTGCCTGCAATGTCACATCGGGCGCACCGGCGCGCCCGAACTCATGGCTGTGGAGTGG CCGGATGGCGGCGACATCGCTCAGGAGGAGCCGGCCTGCGGCGCGCACTATCAGCCCTATGGGCCGGTGGAGCTCGCTTA CGTGAACGCGATGATCACAGAAGTCGCGCTGGACTGTCTTCTCGATCCACCGGCGCAATCATTCAGTCGCGTATTCGTCG CCGCGCCGCGCCGCATCGCGTCACTTGGCGGGCAGCTGACCGAACACTGGCGCTCCGCTTTTGGTGAAGTTGAAGAGGGC GTTCGGACGGTCGACCGACCTTGGCCTTCTGCTAATTGCGCAGCTTGCGGGCCTGGGCATCTCGACGAAGCTGCCTAA
Upstream 100 bases:
>100_bases AGCGCCGGCGGCGGCCGCCATGCTTAAGGACGGCCTCGCGCTCGATTGGCGACGGGCAGCGCTCCTACTCGAGGCGGCCC TGCGCGAGCGGGCGGAGCAA
Downstream 100 bases:
>100_bases TGCTGCCCCAAGATCGAGCTTCTCAGACCTCAGCCGACCAGCGACAGCGTTAAGCTGGGTCCGCTTCAAGCGCTAAACAG GCTTTGCAGCGATATCTTAC
Product: ubiquitin-activating enzyme
Products: ThiS-COSH; AMP; ThiS-COAMP; pyrophosphate [C]
Alternate protein names: Ubiquitin-Activating; Molybdopterin Biosynthesis Protein; Dinucleotide-Utilizing S
Number of amino acids: Translated: 585; Mature: 584
Protein sequence:
>585_residues MPERLDHATISSDYPGRDWIVAAWRISVVFSDGVTRRIDLVAGAQFPTTPIRTALVDHPESMTWPHVESDGILCLLPNMA EWDPDDPSEVAMDLLNRSVRLVEELLEGSIVERDFRDEFVTYWGYRVHSQGENLFSLVAPEPPSRVVRVWRGKNLEVAGE DQDAIAKWVCHRFGDKTPVKTEAAAFLWLDEPLLPAEYPETAADLYHLGERIAGEARTVLEQAAKGEPDEVLVLLGAIGR GGSASIGVKALNPKRRKGRPRTPDEPLSVGFRPGHTPQPLLLDRFFGTAPVVRTLVQRADADWVHGRGQDARTRRLLGAT VVVIGCGSVGAPVACALAQAGVGRLILVDPERLTWPNVGRHPLGATAVGRNKAEALAERLQVDFPHLNVEHRAFGLHQLI ARNEDLLAATDMIVAATGNWVAESALNRWHVRQGRARPVVYGWTEAHACAGHAVAIGQRGGCLQCHIGRTGAPELMAVEW PDGGDIAQEEPACGAHYQPYGPVELAYVNAMITEVALDCLLDPPAQSFSRVFVAAPRRIASLGGQLTEHWRSAFGEVEEG VRTVDRPWPSANCAACGPGHLDEAA
Sequences:
>Translated_585_residues MPERLDHATISSDYPGRDWIVAAWRISVVFSDGVTRRIDLVAGAQFPTTPIRTALVDHPESMTWPHVESDGILCLLPNMA EWDPDDPSEVAMDLLNRSVRLVEELLEGSIVERDFRDEFVTYWGYRVHSQGENLFSLVAPEPPSRVVRVWRGKNLEVAGE DQDAIAKWVCHRFGDKTPVKTEAAAFLWLDEPLLPAEYPETAADLYHLGERIAGEARTVLEQAAKGEPDEVLVLLGAIGR GGSASIGVKALNPKRRKGRPRTPDEPLSVGFRPGHTPQPLLLDRFFGTAPVVRTLVQRADADWVHGRGQDARTRRLLGAT VVVIGCGSVGAPVACALAQAGVGRLILVDPERLTWPNVGRHPLGATAVGRNKAEALAERLQVDFPHLNVEHRAFGLHQLI ARNEDLLAATDMIVAATGNWVAESALNRWHVRQGRARPVVYGWTEAHACAGHAVAIGQRGGCLQCHIGRTGAPELMAVEW PDGGDIAQEEPACGAHYQPYGPVELAYVNAMITEVALDCLLDPPAQSFSRVFVAAPRRIASLGGQLTEHWRSAFGEVEEG VRTVDRPWPSANCAACGPGHLDEAA >Mature_584_residues PERLDHATISSDYPGRDWIVAAWRISVVFSDGVTRRIDLVAGAQFPTTPIRTALVDHPESMTWPHVESDGILCLLPNMAE WDPDDPSEVAMDLLNRSVRLVEELLEGSIVERDFRDEFVTYWGYRVHSQGENLFSLVAPEPPSRVVRVWRGKNLEVAGED QDAIAKWVCHRFGDKTPVKTEAAAFLWLDEPLLPAEYPETAADLYHLGERIAGEARTVLEQAAKGEPDEVLVLLGAIGRG GSASIGVKALNPKRRKGRPRTPDEPLSVGFRPGHTPQPLLLDRFFGTAPVVRTLVQRADADWVHGRGQDARTRRLLGATV VVIGCGSVGAPVACALAQAGVGRLILVDPERLTWPNVGRHPLGATAVGRNKAEALAERLQVDFPHLNVEHRAFGLHQLIA RNEDLLAATDMIVAATGNWVAESALNRWHVRQGRARPVVYGWTEAHACAGHAVAIGQRGGCLQCHIGRTGAPELMAVEWP DGGDIAQEEPACGAHYQPYGPVELAYVNAMITEVALDCLLDPPAQSFSRVFVAAPRRIASLGGQLTEHWRSAFGEVEEGV RTVDRPWPSANCAACGPGHLDEAA
Specific function: Catalyzes The Adenylation By ATP Of The Carboxyl- Terminal Glycine Of This. [C]
COG id: COG0476
COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.7.- [C]
Molecular weight: Translated: 63728; Mature: 63597
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPERLDHATISSDYPGRDWIVAAWRISVVFSDGVTRRIDLVAGAQFPTTPIRTALVDHPE CCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHCCCC SMTWPHVESDGILCLLPNMAEWDPDDPSEVAMDLLNRSVRLVEELLEGSIVERDFRDEFV CCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH TYWGYRVHSQGENLFSLVAPEPPSRVVRVWRGKNLEVAGEDQDAIAKWVCHRFGDKTPVK HHHCEEEECCCCCEEEEECCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCCCC TEAAAFLWLDEPLLPAEYPETAADLYHLGERIAGEARTVLEQAAKGEPDEVLVLLGAIGR CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC GGSASIGVKALNPKRRKGRPRTPDEPLSVGFRPGHTPQPLLLDRFFGTAPVVRTLVQRAD CCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCC ADWVHGRGQDARTRRLLGATVVVIGCGSVGAPVACALAQAGVGRLILVDPERLTWPNVGR CCCCCCCCCCHHHHHHHCEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCC HPLGATAVGRNKAEALAERLQVDFPHLNVEHRAFGLHQLIARNEDLLAATDMIVAATGNW CCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEECCEEEEECCCH VAESALNRWHVRQGRARPVVYGWTEAHACAGHAVAIGQRGGCLQCHIGRTGAPELMAVEW HHHHHHHHHHHHCCCCCCEEEECCHHHHCCCCEEEECCCCCEEEEECCCCCCCCEEEEEC PDGGDIAQEEPACGAHYQPYGPVELAYVNAMITEVALDCLLDPPAQSFSRVFVAAPRRIA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHH SLGGQLTEHWRSAFGEVEEGVRTVDRPWPSANCAACGPGHLDEAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PERLDHATISSDYPGRDWIVAAWRISVVFSDGVTRRIDLVAGAQFPTTPIRTALVDHPE CCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHCCCC SMTWPHVESDGILCLLPNMAEWDPDDPSEVAMDLLNRSVRLVEELLEGSIVERDFRDEFV CCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH TYWGYRVHSQGENLFSLVAPEPPSRVVRVWRGKNLEVAGEDQDAIAKWVCHRFGDKTPVK HHHCEEEECCCCCEEEEECCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCCCC TEAAAFLWLDEPLLPAEYPETAADLYHLGERIAGEARTVLEQAAKGEPDEVLVLLGAIGR CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC GGSASIGVKALNPKRRKGRPRTPDEPLSVGFRPGHTPQPLLLDRFFGTAPVVRTLVQRAD CCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCC ADWVHGRGQDARTRRLLGATVVVIGCGSVGAPVACALAQAGVGRLILVDPERLTWPNVGR CCCCCCCCCCHHHHHHHCEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCC HPLGATAVGRNKAEALAERLQVDFPHLNVEHRAFGLHQLIARNEDLLAATDMIVAATGNW CCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEECCEEEEECCCH VAESALNRWHVRQGRARPVVYGWTEAHACAGHAVAIGQRGGCLQCHIGRTGAPELMAVEW HHHHHHHHHHHHCCCCCCEEEECCHHHHCCCCEEEECCCCCEEEEECCCCCCCCEEEEEC PDGGDIAQEEPACGAHYQPYGPVELAYVNAMITEVALDCLLDPPAQSFSRVFVAAPRRIA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHH SLGGQLTEHWRSAFGEVEEGVRTVDRPWPSANCAACGPGHLDEAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ThiS-COAMP; L-cysteine; ThiS protein; ATP [C]
Specific reaction: ThiS-COAMP + L-cysteine = ThiS-COSH + AMP ThiS protein + ATP = ThiS-COAMP + pyrophosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA