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The map label for this gene is ynfL [C]

Identifier: 162148624

GI number: 162148624

Start: 2942185

End: 2943243

Strand: Reverse

Name: ynfL [C]

Synonym: GDI_2851

Alternate gene names: 162148624

Gene position: 2943243-2942185 (Counterclockwise)

Preceding gene: 162148625

Following gene: 162148619

Centisome position: 74.62

GC content: 51.46

Gene sequence:

>1059_bases
GTGTTGCTTATTAAAAAGGAAAGATTCAGGCGGGACTGGACGGTGTCTTATGTCACCTGTCGGTCCGCTCCTCCTCTCGG
TATGATTTTTTTGCCCAGGGTATATGAGTTTCGACCGTCACATCCGGTGCTGTCAAATGCGTCTTTGATTGCGTCGGCGC
TTGGGGGCAGGATGAGTTATTTATCCCAGCTCAGAACGTTTGTGGACGTTTGCCGTTGGGGGTCGATCTCAAAGGCTGCC
GTTAGACTCGGTATTAGCCAAGCAACCGCTTCCGCGCACGTTCAGGCGATAGAGGCACTCTATGGAAAGCGCTTGCTTGT
CAGGGGGCCATCCGGCATCGAGGCGACGTCTGCGGCGGAAGATCTGGTCGAGCGGATTGCGAACCATCTCGATGCTTTGG
AGATGGAAATTGGCTCGCGGATGAGCCAGAATTCTTCCCAAACGGTGCGGTGGGTCGATCTCCTGATACAGGACGATCTT
TTTGATGAGTCGCTTATGCCGTTTCTCCGCAGCTTGACCGCGACCTTGCCAAGGTTAAGGCTTTTGAATGGTAGTGAGAG
GGCCTGCGTTGAAAGGCTGCACCACGGCACCATCGATATTGCAATCGTGCTATTACCCCACAAATTGCCGGGGTACGAAA
CTATTCACGTGAAATCACTTGATTATGCATATCTGATTCTGAAAAACGGCAGGACGTCGGTAATTGATATTATGTCAGCC
GACTTTGATTTGAACGCGTCCCCACTTATTGTATACGATGGCATTCGTGCCGACGTGATGCACGCATTGACTCAACGTCA
TCCTATGGATCCCCTCGCCACAATGATTGAAGTTGACAGTGCGAGGGCAGCGCATTCTCTCGTCGCGAGCGGGTTAGGGT
GGTCCCTGTTACCGACTTCGTATTGCGAGCAGGAAAATAGAAATGACAGCGCGTCGCTGTCGCAGGTAAATTTTCAGCGG
GACGTTTTCTTTCTATGGAACATAAAGTCGACCCGCCGCGACGGAATGGCTAAATTGAAAAGGACTCTTGTTCAGTTATT
ATCCGGTAACGCCCGATAG

Upstream 100 bases:

>100_bases
GAATCGAGCAAAATCGCCGGCAGCGATGTGCCTGGGTCTAACGCAATCCGCTGTCTCGTTTTGATTGCCGGCCGGTAATT
AACGTTGACAGCGCGACCGG

Downstream 100 bases:

>100_bases
AGAGCACGTACATCCGGTGCGAGAGCTTTTCGTGGCTTTTAGCGTGTTGAGTTCGTTTCCCATCCGCCCCCCAATGACTT
GTACAGCGCCAGATCGCTGA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; LysR-Family Transcriptional Regulator; Transcriptional Regulator

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MLLIKKERFRRDWTVSYVTCRSAPPLGMIFLPRVYEFRPSHPVLSNASLIASALGGRMSYLSQLRTFVDVCRWGSISKAA
VRLGISQATASAHVQAIEALYGKRLLVRGPSGIEATSAAEDLVERIANHLDALEMEIGSRMSQNSSQTVRWVDLLIQDDL
FDESLMPFLRSLTATLPRLRLLNGSERACVERLHHGTIDIAIVLLPHKLPGYETIHVKSLDYAYLILKNGRTSVIDIMSA
DFDLNASPLIVYDGIRADVMHALTQRHPMDPLATMIEVDSARAAHSLVASGLGWSLLPTSYCEQENRNDSASLSQVNFQR
DVFFLWNIKSTRRDGMAKLKRTLVQLLSGNAR

Sequences:

>Translated_352_residues
MLLIKKERFRRDWTVSYVTCRSAPPLGMIFLPRVYEFRPSHPVLSNASLIASALGGRMSYLSQLRTFVDVCRWGSISKAA
VRLGISQATASAHVQAIEALYGKRLLVRGPSGIEATSAAEDLVERIANHLDALEMEIGSRMSQNSSQTVRWVDLLIQDDL
FDESLMPFLRSLTATLPRLRLLNGSERACVERLHHGTIDIAIVLLPHKLPGYETIHVKSLDYAYLILKNGRTSVIDIMSA
DFDLNASPLIVYDGIRADVMHALTQRHPMDPLATMIEVDSARAAHSLVASGLGWSLLPTSYCEQENRNDSASLSQVNFQR
DVFFLWNIKSTRRDGMAKLKRTLVQLLSGNAR
>Mature_352_residues
MLLIKKERFRRDWTVSYVTCRSAPPLGMIFLPRVYEFRPSHPVLSNASLIASALGGRMSYLSQLRTFVDVCRWGSISKAA
VRLGISQATASAHVQAIEALYGKRLLVRGPSGIEATSAAEDLVERIANHLDALEMEIGSRMSQNSSQTVRWVDLLIQDDL
FDESLMPFLRSLTATLPRLRLLNGSERACVERLHHGTIDIAIVLLPHKLPGYETIHVKSLDYAYLILKNGRTSVIDIMSA
DFDLNASPLIVYDGIRADVMHALTQRHPMDPLATMIEVDSARAAHSLVASGLGWSLLPTSYCEQENRNDSASLSQVNFQR
DVFFLWNIKSTRRDGMAKLKRTLVQLLSGNAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39289; Mature: 39289

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLIKKERFRRDWTVSYVTCRSAPPLGMIFLPRVYEFRPSHPVLSNASLIASALGGRMSY
CCEECHHHHCCCCEEEEEEECCCCCCCEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHH
LSQLRTFVDVCRWGSISKAAVRLGISQATASAHVQAIEALYGKRLLVRGPSGIEATSAAE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHH
DLVERIANHLDALEMEIGSRMSQNSSQTVRWVDLLIQDDLFDESLMPFLRSLTATLPRLR
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LLNGSERACVERLHHGTIDIAIVLLPHKLPGYETIHVKSLDYAYLILKNGRTSVIDIMSA
HCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEECCEEEEEEECCCCEEEEEEEC
DFDLNASPLIVYDGIRADVMHALTQRHPMDPLATMIEVDSARAAHSLVASGLGWSLLPTS
CCCCCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCH
YCEQENRNDSASLSQVNFQRDVFFLWNIKSTRRDGMAKLKRTLVQLLSGNAR
HHHHCCCCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLLIKKERFRRDWTVSYVTCRSAPPLGMIFLPRVYEFRPSHPVLSNASLIASALGGRMSY
CCEECHHHHCCCCEEEEEEECCCCCCCEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHH
LSQLRTFVDVCRWGSISKAAVRLGISQATASAHVQAIEALYGKRLLVRGPSGIEATSAAE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHH
DLVERIANHLDALEMEIGSRMSQNSSQTVRWVDLLIQDDLFDESLMPFLRSLTATLPRLR
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LLNGSERACVERLHHGTIDIAIVLLPHKLPGYETIHVKSLDYAYLILKNGRTSVIDIMSA
HCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEECCEEEEEEECCCCEEEEEEEC
DFDLNASPLIVYDGIRADVMHALTQRHPMDPLATMIEVDSARAAHSLVASGLGWSLLPTS
CCCCCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCH
YCEQENRNDSASLSQVNFQRDVFFLWNIKSTRRDGMAKLKRTLVQLLSGNAR
HHHHCCCCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA