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The map label for this gene is trbI [H]

Identifier: 162148514

GI number: 162148514

Start: 2829722

End: 2830894

Strand: Reverse

Name: trbI [H]

Synonym: GDI_2736

Alternate gene names: 162148514

Gene position: 2830894-2829722 (Counterclockwise)

Preceding gene: 162148515

Following gene: 162148513

Centisome position: 71.77

GC content: 65.73

Gene sequence:

>1173_bases
ATGACCGGGCAGGCTCCTGCGAGCGGAGGATCTTCCGCCGCCCCGGTATTGCCGCCTGATCCGCGTCTGCGAGCAGAACG
GCCAAGTGTGGTCCGCCTCAGTCGCACCGTGGTCTGGTCGCTCGGTGGCATGGGCATGATCGCGGTGGCCTTCGCGCTGG
GTTACGCCCTGCAGGCCAGTCATCGGGCGCCATCGACGCCCGCTACGCAGGACACCGATGTCCGTCCCTCGGCCGACGGA
CTGGCGGGGCTGCCCTCCGATTATGTCGGCAAGGGCGTGCCGAAACTCGGCCCCGCGCTGCCCGGTGATCTCGGACGCGC
CATCCTGCATGCGCAAGGGCAGGGGAAGGCGGCCTCCGGCACCGAAGATCACCGCGCCGCTCAGGAGGTCGAGGCGGCGA
TCGCCAGCCGACTGTTCGTGCAGACAGGGGAGCGTGACCGCGCCAGCGAACAGGCGACGCCGCTCGCCCAGGGTGCTCCG
GCCACTCAGAGGCAGGCGTCCACCACGACCGGGCCACAGGCCGGAAACCTCGCCTTTCTGGAAGAGCAGCCTGATCGCGC
GACGACCAGCCCGGACCGCATTGCGCTGCCTGCCTCGCCCTATATCCTACAGGCCGGTACGGTGATCGCTGGAGCGCTGA
ACACGAAGATCAGCTCCGACCTGCCGGGCCAGATCGTCGGTCATGTCACCCAGAACGTCTACGACAGCCCGACCGGCCGC
TATCTGCTGATCCCGCAGGGCAGCACCCTGTTCGGAGCTTATAACAGTAGCATCTCCTTCGGGCAGCAACGCATCCAGAT
CATCTGGACCCGGCTGATTTTCCCGGATGGCGAAAGTCTGGTGTTGGAGAAGTTGCCAGGCGGCGACGCTATCGGGCAGT
CGGGTCTGTCCGACGAGGTCGACAATCATTGGGGCCAGCTCTTCAAGGCGGCCCTCGTCACGACCCTGCTCAGCGTGGGC
TCAGAGGCCGGCACGTCCTGGAACGAGAACAATCTCATGCAGGCCATCCGAAGCGGGGCGAGCAACGGCTTCTCCATGGT
CGGTAACCGGCTGATCGATCGCAGCCTGAACGTCCAGCCGACACTTACCGACCGGCCGGGACTACCGTTCACCGTCATTC
TTGGGCCCGACCTGTTGCTCAAACCCTATCGGAACGGAGGAAATCCTCGATGA

Upstream 100 bases:

>100_bases
GGATGATCGTCGATCGCCTGTTTGCCGCCGCCGAACTGCGGCTGGGCGACAAACATTCCGAACAGCGGGTGCGGATTGTC
CGCACCGACGGGCGGCGGAC

Downstream 100 bases:

>100_bases
CGGACCTGAAAATTCGAGAACTTCCCGATGAGAAACCGGTGAAAATGACCGTGGCGTTACCTCCCGATATCCATCGTGAC
CTGCTTGCCTACGCAGCACT

Product: conjugation TrbI-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MTGQAPASGGSSAAPVLPPDPRLRAERPSVVRLSRTVVWSLGGMGMIAVAFALGYALQASHRAPSTPATQDTDVRPSADG
LAGLPSDYVGKGVPKLGPALPGDLGRAILHAQGQGKAASGTEDHRAAQEVEAAIASRLFVQTGERDRASEQATPLAQGAP
ATQRQASTTTGPQAGNLAFLEEQPDRATTSPDRIALPASPYILQAGTVIAGALNTKISSDLPGQIVGHVTQNVYDSPTGR
YLLIPQGSTLFGAYNSSISFGQQRIQIIWTRLIFPDGESLVLEKLPGGDAIGQSGLSDEVDNHWGQLFKAALVTTLLSVG
SEAGTSWNENNLMQAIRSGASNGFSMVGNRLIDRSLNVQPTLTDRPGLPFTVILGPDLLLKPYRNGGNPR

Sequences:

>Translated_390_residues
MTGQAPASGGSSAAPVLPPDPRLRAERPSVVRLSRTVVWSLGGMGMIAVAFALGYALQASHRAPSTPATQDTDVRPSADG
LAGLPSDYVGKGVPKLGPALPGDLGRAILHAQGQGKAASGTEDHRAAQEVEAAIASRLFVQTGERDRASEQATPLAQGAP
ATQRQASTTTGPQAGNLAFLEEQPDRATTSPDRIALPASPYILQAGTVIAGALNTKISSDLPGQIVGHVTQNVYDSPTGR
YLLIPQGSTLFGAYNSSISFGQQRIQIIWTRLIFPDGESLVLEKLPGGDAIGQSGLSDEVDNHWGQLFKAALVTTLLSVG
SEAGTSWNENNLMQAIRSGASNGFSMVGNRLIDRSLNVQPTLTDRPGLPFTVILGPDLLLKPYRNGGNPR
>Mature_389_residues
TGQAPASGGSSAAPVLPPDPRLRAERPSVVRLSRTVVWSLGGMGMIAVAFALGYALQASHRAPSTPATQDTDVRPSADGL
AGLPSDYVGKGVPKLGPALPGDLGRAILHAQGQGKAASGTEDHRAAQEVEAAIASRLFVQTGERDRASEQATPLAQGAPA
TQRQASTTTGPQAGNLAFLEEQPDRATTSPDRIALPASPYILQAGTVIAGALNTKISSDLPGQIVGHVTQNVYDSPTGRY
LLIPQGSTLFGAYNSSISFGQQRIQIIWTRLIFPDGESLVLEKLPGGDAIGQSGLSDEVDNHWGQLFKAALVTTLLSVGS
EAGTSWNENNLMQAIRSGASNGFSMVGNRLIDRSLNVQPTLTDRPGLPFTVILGPDLLLKPYRNGGNPR

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 40720; Mature: 40589

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGQAPASGGSSAAPVLPPDPRLRAERPSVVRLSRTVVWSLGGMGMIAVAFALGYALQAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHC
HRAPSTPATQDTDVRPSADGLAGLPSDYVGKGVPKLGPALPGDLGRAILHAQGQGKAASG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
TEDHRAAQEVEAAIASRLFVQTGERDRASEQATPLAQGAPATQRQASTTTGPQAGNLAFL
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCEEEE
EEQPDRATTSPDRIALPASPYILQAGTVIAGALNTKISSDLPGQIVGHVTQNVYDSPTGR
ECCCCCCCCCCCEEECCCCCCEEECCCEEEHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC
YLLIPQGSTLFGAYNSSISFGQQRIQIIWTRLIFPDGESLVLEKLPGGDAIGQSGLSDEV
EEEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHCCCCCCHHH
DNHWGQLFKAALVTTLLSVGSEAGTSWNENNLMQAIRSGASNGFSMVGNRLIDRSLNVQP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
TLTDRPGLPFTVILGPDLLLKPYRNGGNPR
CCCCCCCCCEEEEECCCHHEECCCCCCCCC
>Mature Secondary Structure 
TGQAPASGGSSAAPVLPPDPRLRAERPSVVRLSRTVVWSLGGMGMIAVAFALGYALQAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHC
HRAPSTPATQDTDVRPSADGLAGLPSDYVGKGVPKLGPALPGDLGRAILHAQGQGKAASG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
TEDHRAAQEVEAAIASRLFVQTGERDRASEQATPLAQGAPATQRQASTTTGPQAGNLAFL
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCEEEE
EEQPDRATTSPDRIALPASPYILQAGTVIAGALNTKISSDLPGQIVGHVTQNVYDSPTGR
ECCCCCCCCCCCEEECCCCCCEEECCCEEEHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC
YLLIPQGSTLFGAYNSSISFGQQRIQIIWTRLIFPDGESLVLEKLPGGDAIGQSGLSDEV
EEEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHCCCCCCHHH
DNHWGQLFKAALVTTLLSVGSEAGTSWNENNLMQAIRSGASNGFSMVGNRLIDRSLNVQP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
TLTDRPGLPFTVILGPDLLLKPYRNGGNPR
CCCCCCCCCEEEEECCCHHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]