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The map label for this gene is yxbG [H]

Identifier: 162148505

GI number: 162148505

Start: 2821686

End: 2822402

Strand: Reverse

Name: yxbG [H]

Synonym: GDI_2727

Alternate gene names: 162148505

Gene position: 2822402-2821686 (Counterclockwise)

Preceding gene: 162148513

Following gene: 162148504

Centisome position: 71.56

GC content: 62.9

Gene sequence:

>717_bases
ATGAAAGACAAACGCGTCGTGGTGCTGGGTGGGACATCGGGAATCGGATTGGCGGTTGCAGAGGCGGCGGCAGGCGAAGG
CGCGCGGGTTTCGATCGCCTCCAGCCGCAGGTCCAGCGTGGACGCCGCTTTGGCACGGTTGCCGGACGGCACGGACGGAC
ACGCGCTTGACCTGCGTGATGAAGCAGAGGTGAGCAGACTTTTTGCTGCGATCGGGCCCTTCGATCATCTGGTTTTCACG
GCAGGAGAAAGCCTGCGACTCGGGCCAATCGCGGACATGGCGTTACCGTCTGCGCGACAGTTCTTTGAGTTGCGCTATTG
GGGCGCGTTGACGGCGGCGAAATATGCGGCGCCCCTGATCCAACCAGGCGGTTCCATCGTGTTTACCTCCGGCATCGCGG
GTGCGCGGCCGCCGCAAGCTGGCTGGGCATTGGGCGCGAGTATCTGCGGCGCGATGGAAGGGCTGACGCGCGCGCTGGCG
ATCGAACTGGCGCCGATCCGGGTCAATATCGTGGTACCGGGCTTCGTGAAGACTCCGCTCTGGAACGACATTCCGGAGGA
AAACCGTGAGACGATGTACGCGACTGTCCGTGAGAAGCTGCCTGTGGGGCGTATCGGTGAGCCAGACGATCTGGCGGCCG
CCTATGTGTTCCTGATGAAGCAGCGTTTCGCGACGGGACAGAGCTTCGTTATCGATGGGGGTGGCTTGCTGGTATAG

Upstream 100 bases:

>100_bases
TGGAATGACAGAATTGCGCTCGAATCATGAGATGTCCAGCAGGCATATGCGTCGCACAGGCGGTGCTTCTGCCGCCCGGA
GCGGAGTGTGACGGATGGAC

Downstream 100 bases:

>100_bases
AGAAGCTTCAAGCGCAAGCAGAAAAGAGTTCGCCAAAACAGCTGTCAAACCACGCTTTGTTCTCAAATGGCGACTGTTGC
AACTTGAGAAGCAATCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKDKRVVVLGGTSGIGLAVAEAAAGEGARVSIASSRRSSVDAALARLPDGTDGHALDLRDEAEVSRLFAAIGPFDHLVFT
AGESLRLGPIADMALPSARQFFELRYWGALTAAKYAAPLIQPGGSIVFTSGIAGARPPQAGWALGASICGAMEGLTRALA
IELAPIRVNIVVPGFVKTPLWNDIPEENRETMYATVREKLPVGRIGEPDDLAAAYVFLMKQRFATGQSFVIDGGGLLV

Sequences:

>Translated_238_residues
MKDKRVVVLGGTSGIGLAVAEAAAGEGARVSIASSRRSSVDAALARLPDGTDGHALDLRDEAEVSRLFAAIGPFDHLVFT
AGESLRLGPIADMALPSARQFFELRYWGALTAAKYAAPLIQPGGSIVFTSGIAGARPPQAGWALGASICGAMEGLTRALA
IELAPIRVNIVVPGFVKTPLWNDIPEENRETMYATVREKLPVGRIGEPDDLAAAYVFLMKQRFATGQSFVIDGGGLLV
>Mature_238_residues
MKDKRVVVLGGTSGIGLAVAEAAAGEGARVSIASSRRSSVDAALARLPDGTDGHALDLRDEAEVSRLFAAIGPFDHLVFT
AGESLRLGPIADMALPSARQFFELRYWGALTAAKYAAPLIQPGGSIVFTSGIAGARPPQAGWALGASICGAMEGLTRALA
IELAPIRVNIVVPGFVKTPLWNDIPEENRETMYATVREKLPVGRIGEPDDLAAAYVFLMKQRFATGQSFVIDGGGLLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=31.9672131147541, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=33.4661354581673, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI5031737, Length=254, Percent_Identity=30.7086614173228, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI7705925, Length=242, Percent_Identity=29.7520661157025, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI126723750, Length=255, Percent_Identity=31.7647058823529, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI59889578, Length=231, Percent_Identity=31.1688311688312, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI19923817, Length=259, Percent_Identity=28.1853281853282, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI33667109, Length=197, Percent_Identity=32.994923857868, Blast_Score=75, Evalue=8e-14,
Organism=Escherichia coli, GI1789378, Length=252, Percent_Identity=30.1587301587302, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI87082100, Length=258, Percent_Identity=28.6821705426357, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788459, Length=247, Percent_Identity=28.7449392712551, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI2367365, Length=236, Percent_Identity=29.6610169491525, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786812, Length=250, Percent_Identity=30.4, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI2367175, Length=246, Percent_Identity=28.0487804878049, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=27.3469387755102, Blast_Score=64, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17561402, Length=249, Percent_Identity=30.9236947791165, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17562910, Length=269, Percent_Identity=29.368029739777, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17560150, Length=257, Percent_Identity=29.1828793774319, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17562990, Length=257, Percent_Identity=30.3501945525292, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17560676, Length=251, Percent_Identity=27.0916334661355, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17563726, Length=257, Percent_Identity=26.8482490272374, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17531453, Length=260, Percent_Identity=30.7692307692308, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=267, Percent_Identity=28.8389513108614, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=257, Percent_Identity=27.6264591439689, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=28.2442748091603, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=29.0076335877863, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17560332, Length=264, Percent_Identity=28.030303030303, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=27.4193548387097, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17562908, Length=261, Percent_Identity=29.5019157088123, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=29.8387096774194, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=24.9056603773585, Blast_Score=64, Evalue=1e-10,
Organism=Drosophila melanogaster, GI23397609, Length=245, Percent_Identity=32.2448979591837, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21355319, Length=244, Percent_Identity=31.9672131147541, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21357041, Length=249, Percent_Identity=29.3172690763052, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28571526, Length=248, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24643142, Length=239, Percent_Identity=27.1966527196653, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 24959; Mature: 24959

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKRVVVLGGTSGIGLAVAEAAAGEGARVSIASSRRSSVDAALARLPDGTDGHALDLRD
CCCCEEEEEECCCCCCCEEEHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEECCCC
EAEVSRLFAAIGPFDHLVFTAGESLRLGPIADMALPSARQFFELRYWGALTAAKYAAPLI
HHHHHHHHHHHCCHHHEEEECCCCEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
QPGGSIVFTSGIAGARPPQAGWALGASICGAMEGLTRALAIELAPIRVNIVVPGFVKTPL
CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCCC
WNDIPEENRETMYATVREKLPVGRIGEPDDLAAAYVFLMKQRFATGQSFVIDGGGLLV
CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEC
>Mature Secondary Structure
MKDKRVVVLGGTSGIGLAVAEAAAGEGARVSIASSRRSSVDAALARLPDGTDGHALDLRD
CCCCEEEEEECCCCCCCEEEHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEECCCC
EAEVSRLFAAIGPFDHLVFTAGESLRLGPIADMALPSARQFFELRYWGALTAAKYAAPLI
HHHHHHHHHHHCCHHHEEEECCCCEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
QPGGSIVFTSGIAGARPPQAGWALGASICGAMEGLTRALAIELAPIRVNIVVPGFVKTPL
CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCCC
WNDIPEENRETMYATVREKLPVGRIGEPDDLAAAYVFLMKQRFATGQSFVIDGGGLLV
CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377 [H]