Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

Click here to switch to the map view.

The map label for this gene is ucpA [H]

Identifier: 162148448

GI number: 162148448

Start: 2759901

End: 2760653

Strand: Reverse

Name: ucpA [H]

Synonym: GDI_2667

Alternate gene names: 162148448

Gene position: 2760653-2759901 (Counterclockwise)

Preceding gene: 162148450

Following gene: 162148447

Centisome position: 69.99

GC content: 68.66

Gene sequence:

>753_bases
ATGCGACTGGCGGGCAAACGGGCTCTGATCACGGCGGCAGCCAACGGCATCGGTCGCGCGACCGTGGAGGCCTTCATTCG
CGAGGGCGCGGGCGTGATCGCAACCGATATCGATCCCGGCGTGATGGAGGCATGGGGCGATTTCGGACCCGGGGGGCGCG
CGTTGCGGCTGGATGTCATGGACCCGGCGGCGATCGACGACGTGGCGCGCCAGGTCGGTCCCGTCGACGTGCTGTTCAAT
TGTGCCGGCACGGTCCAGAACGGCGCGCTGCTCGACTGCACGGACCGGGAATGGCAGTTCTCGTTCGACCTGAATGTGAC
GGCGATGTTCCGGATGATCCGCGCCTTCCTGCCCGGCATGATCGCGGCCGGCGGCGGCGCGATCGTCAACATGGCCTCGG
TCGCGTCGAGCCTGAAGGGCGTGGCGGACCGCTGCGCCTATGGTGCCTCGAAGGCGGCCGTGATCGGCCTGACGAAATCG
ATCGCGACGGACTATGTGCGTCACAATGTCCGCTGTAACGCCGTCTGCCCCGGTACCGTCGAAACCCCGTCGCTGCGCGC
CCGGGTCGAGGCGCTGGCCCGTGCGCGCGGTACCGACCTGGACGCGGCACTGGGCGCCTTTCGCGCGCGCCAGCCCATGG
GCCGCCTGGGCACCGCCGATGAAATCGCCGAGGCCGTAGTCTATCTGGCCTCCGACGCCGCCGCGTTCGTGACCGGCAGC
ACGCTGGTCATCGATGGCGGATTCATCAACTGA

Upstream 100 bases:

>100_bases
AGCGTGATCGCGCGGGTCGCAAATTGGTCTGACCAATCTTGACATTGGCCGGACCAATTTAATAGGAGATTCACCAAAGC
AATAACAAGGCGGGATCGTC

Downstream 100 bases:

>100_bases
CACCCGGAAGACGCAAGAACAACAACAAGGCAGGCGTCCATCATGAAGCTTTTGAGATTTGGCGAGAAGGGGGCGGAGCG
TCCCGGCCTGCTTGACGAAG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MRLAGKRALITAAANGIGRATVEAFIREGAGVIATDIDPGVMEAWGDFGPGGRALRLDVMDPAAIDDVARQVGPVDVLFN
CAGTVQNGALLDCTDREWQFSFDLNVTAMFRMIRAFLPGMIAAGGGAIVNMASVASSLKGVADRCAYGASKAAVIGLTKS
IATDYVRHNVRCNAVCPGTVETPSLRARVEALARARGTDLDAALGAFRARQPMGRLGTADEIAEAVVYLASDAAAFVTGS
TLVIDGGFIN

Sequences:

>Translated_250_residues
MRLAGKRALITAAANGIGRATVEAFIREGAGVIATDIDPGVMEAWGDFGPGGRALRLDVMDPAAIDDVARQVGPVDVLFN
CAGTVQNGALLDCTDREWQFSFDLNVTAMFRMIRAFLPGMIAAGGGAIVNMASVASSLKGVADRCAYGASKAAVIGLTKS
IATDYVRHNVRCNAVCPGTVETPSLRARVEALARARGTDLDAALGAFRARQPMGRLGTADEIAEAVVYLASDAAAFVTGS
TLVIDGGFIN
>Mature_250_residues
MRLAGKRALITAAANGIGRATVEAFIREGAGVIATDIDPGVMEAWGDFGPGGRALRLDVMDPAAIDDVARQVGPVDVLFN
CAGTVQNGALLDCTDREWQFSFDLNVTAMFRMIRAFLPGMIAAGGGAIVNMASVASSLKGVADRCAYGASKAAVIGLTKS
IATDYVRHNVRCNAVCPGTVETPSLRARVEALARARGTDLDAALGAFRARQPMGRLGTADEIAEAVVYLASDAAAFVTGS
TLVIDGGFIN

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI66933014, Length=247, Percent_Identity=52.2267206477733, Blast_Score=241, Evalue=6e-64,
Organism=Homo sapiens, GI7705925, Length=252, Percent_Identity=34.1269841269841, Blast_Score=117, Evalue=8e-27,
Organism=Homo sapiens, GI15277342, Length=264, Percent_Identity=31.0606060606061, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI10190704, Length=257, Percent_Identity=33.4630350194552, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI40254992, Length=241, Percent_Identity=29.4605809128631, Blast_Score=100, Evalue=8e-22,
Organism=Homo sapiens, GI32483357, Length=260, Percent_Identity=30.7692307692308, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI19923817, Length=258, Percent_Identity=24.8062015503876, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI126723750, Length=261, Percent_Identity=27.2030651340996, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI40807363, Length=194, Percent_Identity=32.9896907216495, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI31542939, Length=202, Percent_Identity=35.1485148514851, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI59889578, Length=231, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI210032110, Length=200, Percent_Identity=29, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI142976729, Length=191, Percent_Identity=30.3664921465969, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI4758504, Length=266, Percent_Identity=29.3233082706767, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI4504505, Length=198, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI224922801, Length=175, Percent_Identity=34.8571428571429, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=38.5826771653543, Blast_Score=157, Evalue=4e-40,
Organism=Escherichia coli, GI1787335, Length=253, Percent_Identity=37.1541501976285, Blast_Score=151, Evalue=4e-38,
Organism=Escherichia coli, GI1790717, Length=256, Percent_Identity=32.03125, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1789208, Length=257, Percent_Identity=30.7392996108949, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=32.5490196078431, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1788459, Length=187, Percent_Identity=34.2245989304813, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1787905, Length=255, Percent_Identity=30.1960784313725, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI87082160, Length=261, Percent_Identity=28.3524904214559, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789378, Length=263, Percent_Identity=27.7566539923954, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI2367175, Length=259, Percent_Identity=30.8880308880309, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI2367365, Length=252, Percent_Identity=30.1587301587302, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1787820, Length=178, Percent_Identity=30.8988764044944, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI25147288, Length=254, Percent_Identity=32.2834645669291, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17555706, Length=253, Percent_Identity=35.1778656126482, Blast_Score=130, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI17561402, Length=256, Percent_Identity=31.25, Blast_Score=114, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI71994600, Length=259, Percent_Identity=32.046332046332, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI72000259, Length=265, Percent_Identity=29.4339622641509, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71994604, Length=256, Percent_Identity=31.25, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17560150, Length=260, Percent_Identity=30, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17559104, Length=266, Percent_Identity=28.5714285714286, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17560676, Length=266, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17508895, Length=199, Percent_Identity=33.6683417085427, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17544670, Length=268, Percent_Identity=28.7313432835821, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17562990, Length=264, Percent_Identity=28.7878787878788, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI193203117, Length=192, Percent_Identity=32.2916666666667, Blast_Score=90, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=29.1187739463602, Blast_Score=90, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=30.1526717557252, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17562904, Length=262, Percent_Identity=27.8625954198473, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=28.2442748091603, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI193203115, Length=188, Percent_Identity=32.9787234042553, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI193204405, Length=265, Percent_Identity=27.1698113207547, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI115534694, Length=254, Percent_Identity=29.9212598425197, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17564282, Length=193, Percent_Identity=32.1243523316062, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17562910, Length=273, Percent_Identity=28.2051282051282, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17560220, Length=272, Percent_Identity=26.8382352941176, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17531453, Length=272, Percent_Identity=26.1029411764706, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562906, Length=274, Percent_Identity=26.6423357664234, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=264, Percent_Identity=25.7575757575758, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17538182, Length=261, Percent_Identity=28.735632183908, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17536025, Length=266, Percent_Identity=28.1954887218045, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=262, Percent_Identity=25.1908396946565, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17565030, Length=263, Percent_Identity=27.7566539923954, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17561272, Length=202, Percent_Identity=27.7227722772277, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562908, Length=272, Percent_Identity=25.3676470588235, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17536651, Length=255, Percent_Identity=23.921568627451, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17568967, Length=198, Percent_Identity=25.7575757575758, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=256, Percent_Identity=27.34375, Blast_Score=76, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6322861, Length=210, Percent_Identity=27.1428571428571, Blast_Score=70, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6324126, Length=260, Percent_Identity=26.1538461538462, Blast_Score=65, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24639444, Length=256, Percent_Identity=31.25, Blast_Score=114, Evalue=8e-26,
Organism=Drosophila melanogaster, GI24643142, Length=247, Percent_Identity=31.9838056680162, Blast_Score=108, Evalue=3e-24,
Organism=Drosophila melanogaster, GI21355319, Length=261, Percent_Identity=30.2681992337165, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI23397609, Length=256, Percent_Identity=33.203125, Blast_Score=107, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24644337, Length=257, Percent_Identity=34.2412451361868, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24644339, Length=261, Percent_Identity=28.735632183908, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21357041, Length=178, Percent_Identity=32.0224719101124, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28571526, Length=178, Percent_Identity=32.0224719101124, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI17737361, Length=263, Percent_Identity=30.4182509505703, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24581726, Length=194, Percent_Identity=29.3814432989691, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI18859837, Length=191, Percent_Identity=28.7958115183246, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI221510726, Length=185, Percent_Identity=31.8918918918919, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 25894; Mature: 25894

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MRLAGKRALITAAANGIGRATVEAFIREGAGVIATDIDPGVMEAWGDFGPGGRALRLDVM
CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCCCCEEEEECC
DPAAIDDVARQVGPVDVLFNCAGTVQNGALLDCTDREWQFSFDLNVTAMFRMIRAFLPGM
CCHHHHHHHHHCCCHHEEEECCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHH
IAAGGGAIVNMASVASSLKGVADRCAYGASKAAVIGLTKSIATDYVRHNVRCNAVCPGTV
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHCCCEECEECCCCC
ETPSLRARVEALARARGTDLDAALGAFRARQPMGRLGTADEIAEAVVYLASDAAAFVTGS
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHEEECC
TLVIDGGFIN
EEEECCCCCC
>Mature Secondary Structure
MRLAGKRALITAAANGIGRATVEAFIREGAGVIATDIDPGVMEAWGDFGPGGRALRLDVM
CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCCCCEEEEECC
DPAAIDDVARQVGPVDVLFNCAGTVQNGALLDCTDREWQFSFDLNVTAMFRMIRAFLPGM
CCHHHHHHHHHCCCHHEEEECCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHH
IAAGGGAIVNMASVASSLKGVADRCAYGASKAAVIGLTKSIATDYVRHNVRCNAVCPGTV
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHCCCEECEECCCCC
ETPSLRARVEALARARGTDLDAALGAFRARQPMGRLGTADEIAEAVVYLASDAAAFVTGS
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHEEECC
TLVIDGGFIN
EEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]