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The map label for this gene is fucU [H]

Identifier: 162148444

GI number: 162148444

Start: 2756490

End: 2756927

Strand: Reverse

Name: fucU [H]

Synonym: GDI_2663

Alternate gene names: 162148444

Gene position: 2756927-2756490 (Counterclockwise)

Preceding gene: 162148445

Following gene: 162148443

Centisome position: 69.9

GC content: 65.53

Gene sequence:

>438_bases
ATGCTGATCGGTATTTCGTCCCTGCTGACGCCGGATGTGCTGTATGCGCTGGCGGCGATGGGACATGGCGACCGCGTCGC
GATCGTCGATGCGAACTTCCCGGCCGAGCGGATCGCCCGCAGGCTGAACCGCCTGCCCGCGATCCCGGTCCCGCCCGTGC
TGGACGCCATATTGAAGCTGTTGCCGCTGGATGGCTTCGTCGATGATCCGGCCGTCTCGATGCAGCAGGTCGGCGACCCG
GACGCCGTGCCCGAAGCGGTGGCGGACATCGACGCGACGCTGCGCGCACATGGCCACGCGGCATCGCGCAGAATCGAGCG
TTACGCGTTTTACGAAGAAACCGCGCATTGCTTCGCCGTGATCCAGACCGGGGAAGGGCGTCCCTATGGGAACGTGATCC
TCGCCAAGGGGGTCATCTTCGCGGATCATCCGGGATGA

Upstream 100 bases:

>100_bases
CCGTATCGTCGCACACCACGGGACAATGGGTCGTCGTGGATGGCGGCTACATTCATCTCGACCGCGCATTCTGACCGCGC
GCCCGGGTAAAGGAGGCTGC

Downstream 100 bases:

>100_bases
AGATCGACGCGCATCGTCACGTCTGGCGCCGGGCGTCGGGCATCTATGGCTGGCTGCCGCCCCATTCGATGATCGACCGC
GATTTCGACCTCGACATGCC

Product: fucose operon fucU protein

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MLIGISSLLTPDVLYALAAMGHGDRVAIVDANFPAERIARRLNRLPAIPVPPVLDAILKLLPLDGFVDDPAVSMQQVGDP
DAVPEAVADIDATLRAHGHAASRRIERYAFYEETAHCFAVIQTGEGRPYGNVILAKGVIFADHPG

Sequences:

>Translated_145_residues
MLIGISSLLTPDVLYALAAMGHGDRVAIVDANFPAERIARRLNRLPAIPVPPVLDAILKLLPLDGFVDDPAVSMQQVGDP
DAVPEAVADIDATLRAHGHAASRRIERYAFYEETAHCFAVIQTGEGRPYGNVILAKGVIFADHPG
>Mature_145_residues
MLIGISSLLTPDVLYALAAMGHGDRVAIVDANFPAERIARRLNRLPAIPVPPVLDAILKLLPLDGFVDDPAVSMQQVGDP
DAVPEAVADIDATLRAHGHAASRRIERYAFYEETAHCFAVIQTGEGRPYGNVILAKGVIFADHPG

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=145, Percent_Identity=42.7586206896552, Blast_Score=106, Evalue=7e-24,
Organism=Homo sapiens, GI148596951, Length=130, Percent_Identity=40.7692307692308, Blast_Score=89, Evalue=9e-19,
Organism=Escherichia coli, GI1789169, Length=139, Percent_Identity=38.1294964028777, Blast_Score=83, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 15517; Mature: 15517

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIGISSLLTPDVLYALAAMGHGDRVAIVDANFPAERIARRLNRLPAIPVPPVLDAILKL
CEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHH
LPLDGFVDDPAVSMQQVGDPDAVPEAVADIDATLRAHGHAASRRIERYAFYEETAHCFAV
HCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCEEEEE
IQTGEGRPYGNVILAKGVIFADHPG
EECCCCCCCCCEEEECCEEEECCCC
>Mature Secondary Structure
MLIGISSLLTPDVLYALAAMGHGDRVAIVDANFPAERIARRLNRLPAIPVPPVLDAILKL
CEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHH
LPLDGFVDDPAVSMQQVGDPDAVPEAVADIDATLRAHGHAASRRIERYAFYEETAHCFAV
HCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCEEEEE
IQTGEGRPYGNVILAKGVIFADHPG
EECCCCCCCCCEEEECCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA