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The map label for this gene is tsr [C]

Identifier: 162148403

GI number: 162148403

Start: 2712594

End: 2714843

Strand: Reverse

Name: tsr [C]

Synonym: GDI_2622

Alternate gene names: 162148403

Gene position: 2714843-2712594 (Counterclockwise)

Preceding gene: 162148404

Following gene: 162148402

Centisome position: 68.83

GC content: 60.27

Gene sequence:

>2250_bases
ATGATGGCATCGTCAAGCGCCCGGTCCCGCCCGTATTTGTCGACCAAAATCATCATGATATGCGGGCTGTCGTTTCTCGT
TATCCAGATCGTCGCCGTAAGCTTGTCCGCCAGACTGATGAAGGCGCAGGTCGAGAAGAATATCTATTCCGAGGCGATTT
CAAAAAGCCAGATCCTGGCGCAGCAGATCATCCAGGCGCTCGACGCGCAGAATACCGTCGTGCGCAGCCTGCGAGGCACC
ATTGAATCCGCCCATCGGTCCGGTGTGCTGACCAGGCAGTTCGTCATCGACAATCTGTCCGAAACCATGCGCCTCTTCCC
CGATATTTACGGCATGGACGTCAAGGAAGCCGCGCATGGCGCCGAGGGCTCGCTCTTCCCCGGCGGGCCGGCCGGCAGTT
CTCACGACGTATTCTTTCCCTACGCCGTGCGCGGCCCGGGCGGCAAGGTTGCCATCACCACGCCCGCGCTGCATTACAGT
CCCGTCTTTTATAGTATTATAAATACCGGAAATCTCGAAGGTCTTGAACCGTATATCGACACGGATTCAGGGGTTCCGAT
GGTATCGCCCACCTATCCCATCACGTTCGATGGAAAGAGGATCGCCGTCATCGGCGCGGATATCCCGCTCGGGTGGCTGG
CGCCGCTTCTGAAAACCGTCCATATCGCCCAGGGTTCGACGGTTTCCCTTCTGTCGGATCAGGGCTTCTGGATCGTCACC
CCCAATTCCTCGCAGGTGATGAAGCATTATGATGCGTCGTCCGACGCGACTGTGCAAAAGGCCATAACACAGCATACACT
GACCATCGCGCGGGATTTCAATGACGGCGCGGTGGACCGTATCATCGTTCCGATCAGAATTGACGATTTCGGCATCTACT
GGACGCTTATCGTCGACGTGCCGTCCGACGCGATCACCAAACCCGTCTGGAATACCGTCTTTTCCCTGGTCGTTCCGGGG
GTTACGCTGATTCTGCTGTCCATCGTGGTGATGTGGCTCACGTTCAACAGGATGTTGAGCACGCCCCTGCGCAACCTTTT
GCGGTCGGTTTCGGAACTGGAACGCGGTGAATATAACGGCACGGTCTACGGGACACGGCGTTCCGACGAAATCGGCGCCA
TGGCCCGTGGGCTGGAGGGCTTCCGCGGGTCCCTGCTCAGGGCACAGCAGGCTGACGCCGAAGCCCGGCAGGCCCGCCAG
CAGAACGAGGCGATGCAGGCCGCGCGCCGCCGGGAAGACGAACAGAGGCTCAAGGACGGCAACCGGGTCATCAAGACGAT
CGGCGCCGCGCTGGACGACCTGGCCAACGGGGACCTGTCGGCCCGTGTCCATGACGCGCTGCCCCGGGAGTTCGAGCCGC
TGCGCGACAATTTCAACCGGTCGGTCCAGCAACTCGCCATCGCCATCGGGGGCATCTCCGAGGCCGTCAGCGTCATCAGG
AAAGGCAGCCAGGTCGTCTCGGGCGGGGCGGAGGAACTCGCCGAACGGACGGAACAGCAGGCCGCCGCGCTGGAAGAAAC
GACGTCCGCGATAAATCAGATCGCCCGGAACGTTTCCCAATCGGAGGAGATCATCACCCAGACCCAGACCGTCGGTCTGA
AAGCCTGCCGGTCCGCCGAATCGTCTTCGGACATCATGGGCAGGACCCGCAAGGCCATGCAGCGCATAGAAACGAGCTCG
GCCGAAGTCGTCGCCATTATCGAGATCATCGAAGGCATCGCGTTCCAGACCAATATCCTTGCCCTCAATGCCAGCATCGA
AGCCGCCAGCGCGGGCAACGCGGGAAAAGGCTTCGCCGTCGTGGCCAACGAAGTCCGCAGCCTGGCCCAACGCAGTGCCG
AGGCCGCCAAGGGCATCAGTTCGCTGGTGAACAAGACGGTCGAGGAAATTCATGAAGGTGCGACCTGCGTGCGGGACACG
GAACGGGCCCTGCAGGATATTTCCAGCCTTGTCTCGACAATGGGCGAGAAGCTGAACACGATCGTCCATAGCGCGCGTGA
ACAATCCTCCAGCCTGCGGGAGGTCACCACCGCTGTAAACGTCATGGACCAGACCACGCAGAAAAACGCATCCATCGCCG
ACAATTCGCGCTCGTCGTCACGCAGCCTGACAGAGGAAACGCAGAAGCTGACGGACCTGATCACGCACTTCAAACTGTCC
GGGTCCGAAAACAGCGATATCCAGGCATGGCACGGTGAAGTCATTCACCTGGCCGAACGGGTTCATGAACGTTCGGGGTT
CAATCGCTGA

Upstream 100 bases:

>100_bases
TAGAAACCTTCCCATCCTTCGTAAAGCGAATAAACCACCCTAAGTTCGCAACAAAGACTGACAGAAAAATATCTTTCCAT
TTCCTCGGAGGGGTCTTTTT

Downstream 100 bases:

>100_bases
TATCGTAGCTTACGGGCAGGTGCCTCTATCCACTGTCCCCAGTCCGAGAAACTTCGGATGCGGGGCGGTGGATCGAGCAC
AGACGGACCAATCACCACCT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 749; Mature: 749

Protein sequence:

>749_residues
MMASSSARSRPYLSTKIIMICGLSFLVIQIVAVSLSARLMKAQVEKNIYSEAISKSQILAQQIIQALDAQNTVVRSLRGT
IESAHRSGVLTRQFVIDNLSETMRLFPDIYGMDVKEAAHGAEGSLFPGGPAGSSHDVFFPYAVRGPGGKVAITTPALHYS
PVFYSIINTGNLEGLEPYIDTDSGVPMVSPTYPITFDGKRIAVIGADIPLGWLAPLLKTVHIAQGSTVSLLSDQGFWIVT
PNSSQVMKHYDASSDATVQKAITQHTLTIARDFNDGAVDRIIVPIRIDDFGIYWTLIVDVPSDAITKPVWNTVFSLVVPG
VTLILLSIVVMWLTFNRMLSTPLRNLLRSVSELERGEYNGTVYGTRRSDEIGAMARGLEGFRGSLLRAQQADAEARQARQ
QNEAMQAARRREDEQRLKDGNRVIKTIGAALDDLANGDLSARVHDALPREFEPLRDNFNRSVQQLAIAIGGISEAVSVIR
KGSQVVSGGAEELAERTEQQAAALEETTSAINQIARNVSQSEEIITQTQTVGLKACRSAESSSDIMGRTRKAMQRIETSS
AEVVAIIEIIEGIAFQTNILALNASIEAASAGNAGKGFAVVANEVRSLAQRSAEAAKGISSLVNKTVEEIHEGATCVRDT
ERALQDISSLVSTMGEKLNTIVHSAREQSSSLREVTTAVNVMDQTTQKNASIADNSRSSSRSLTEETQKLTDLITHFKLS
GSENSDIQAWHGEVIHLAERVHERSGFNR

Sequences:

>Translated_749_residues
MMASSSARSRPYLSTKIIMICGLSFLVIQIVAVSLSARLMKAQVEKNIYSEAISKSQILAQQIIQALDAQNTVVRSLRGT
IESAHRSGVLTRQFVIDNLSETMRLFPDIYGMDVKEAAHGAEGSLFPGGPAGSSHDVFFPYAVRGPGGKVAITTPALHYS
PVFYSIINTGNLEGLEPYIDTDSGVPMVSPTYPITFDGKRIAVIGADIPLGWLAPLLKTVHIAQGSTVSLLSDQGFWIVT
PNSSQVMKHYDASSDATVQKAITQHTLTIARDFNDGAVDRIIVPIRIDDFGIYWTLIVDVPSDAITKPVWNTVFSLVVPG
VTLILLSIVVMWLTFNRMLSTPLRNLLRSVSELERGEYNGTVYGTRRSDEIGAMARGLEGFRGSLLRAQQADAEARQARQ
QNEAMQAARRREDEQRLKDGNRVIKTIGAALDDLANGDLSARVHDALPREFEPLRDNFNRSVQQLAIAIGGISEAVSVIR
KGSQVVSGGAEELAERTEQQAAALEETTSAINQIARNVSQSEEIITQTQTVGLKACRSAESSSDIMGRTRKAMQRIETSS
AEVVAIIEIIEGIAFQTNILALNASIEAASAGNAGKGFAVVANEVRSLAQRSAEAAKGISSLVNKTVEEIHEGATCVRDT
ERALQDISSLVSTMGEKLNTIVHSAREQSSSLREVTTAVNVMDQTTQKNASIADNSRSSSRSLTEETQKLTDLITHFKLS
GSENSDIQAWHGEVIHLAERVHERSGFNR
>Mature_749_residues
MMASSSARSRPYLSTKIIMICGLSFLVIQIVAVSLSARLMKAQVEKNIYSEAISKSQILAQQIIQALDAQNTVVRSLRGT
IESAHRSGVLTRQFVIDNLSETMRLFPDIYGMDVKEAAHGAEGSLFPGGPAGSSHDVFFPYAVRGPGGKVAITTPALHYS
PVFYSIINTGNLEGLEPYIDTDSGVPMVSPTYPITFDGKRIAVIGADIPLGWLAPLLKTVHIAQGSTVSLLSDQGFWIVT
PNSSQVMKHYDASSDATVQKAITQHTLTIARDFNDGAVDRIIVPIRIDDFGIYWTLIVDVPSDAITKPVWNTVFSLVVPG
VTLILLSIVVMWLTFNRMLSTPLRNLLRSVSELERGEYNGTVYGTRRSDEIGAMARGLEGFRGSLLRAQQADAEARQARQ
QNEAMQAARRREDEQRLKDGNRVIKTIGAALDDLANGDLSARVHDALPREFEPLRDNFNRSVQQLAIAIGGISEAVSVIR
KGSQVVSGGAEELAERTEQQAAALEETTSAINQIARNVSQSEEIITQTQTVGLKACRSAESSSDIMGRTRKAMQRIETSS
AEVVAIIEIIEGIAFQTNILALNASIEAASAGNAGKGFAVVANEVRSLAQRSAEAAKGISSLVNKTVEEIHEGATCVRDT
ERALQDISSLVSTMGEKLNTIVHSAREQSSSLREVTTAVNVMDQTTQKNASIADNSRSSSRSLTEETQKLTDLITHFKLS
GSENSDIQAWHGEVIHLAERVHERSGFNR

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=299, Percent_Identity=36.1204013377926, Blast_Score=164, Evalue=2e-41,
Organism=Escherichia coli, GI1787690, Length=289, Percent_Identity=34.2560553633218, Blast_Score=160, Evalue=3e-40,
Organism=Escherichia coli, GI1788195, Length=251, Percent_Identity=37.8486055776892, Blast_Score=159, Evalue=5e-40,
Organism=Escherichia coli, GI1788194, Length=304, Percent_Identity=35.5263157894737, Blast_Score=159, Evalue=9e-40,
Organism=Escherichia coli, GI1789453, Length=260, Percent_Identity=36.1538461538462, Blast_Score=152, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 81273; Mature: 81273

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMASSSARSRPYLSTKIIMICGLSFLVIQIVAVSLSARLMKAQVEKNIYSEAISKSQILA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQIIQALDAQNTVVRSLRGTIESAHRSGVLTRQFVIDNLSETMRLFPDIYGMDVKEAAHG
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
AEGSLFPGGPAGSSHDVFFPYAVRGPGGKVAITTPALHYSPVFYSIINTGNLEGLEPYID
CCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCHHCHHHHHHHCCCCCCCCCCCCC
TDSGVPMVSPTYPITFDGKRIAVIGADIPLGWLAPLLKTVHIAQGSTVSLLSDQGFWIVT
CCCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEE
PNSSQVMKHYDASSDATVQKAITQHTLTIARDFNDGAVDRIIVPIRIDDFGIYWTLIVDV
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEEECCCEEEEEEEEC
PSDAITKPVWNTVFSLVVPGVTLILLSIVVMWLTFNRMLSTPLRNLLRSVSELERGEYNG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TVYGTRRSDEIGAMARGLEGFRGSLLRAQQADAEARQARQQNEAMQAARRREDEQRLKDG
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
NRVIKTIGAALDDLANGDLSARVHDALPREFEPLRDNFNRSVQQLAIAIGGISEAVSVIR
HHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
KGSQVVSGGAEELAERTEQQAAALEETTSAINQIARNVSQSEEIITQTQTVGLKACRSAE
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SSSDIMGRTRKAMQRIETSSAEVVAIIEIIEGIAFQTNILALNASIEAASAGNAGKGFAV
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHEEEEEEEECCCCCCCCCCCCCCHHH
VANEVRSLAQRSAEAAKGISSLVNKTVEEIHEGATCVRDTERALQDISSLVSTMGEKLNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVHSAREQSSSLREVTTAVNVMDQTTQKNASIADNSRSSSRSLTEETQKLTDLITHFKLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
GSENSDIQAWHGEVIHLAERVHERSGFNR
CCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMASSSARSRPYLSTKIIMICGLSFLVIQIVAVSLSARLMKAQVEKNIYSEAISKSQILA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQIIQALDAQNTVVRSLRGTIESAHRSGVLTRQFVIDNLSETMRLFPDIYGMDVKEAAHG
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
AEGSLFPGGPAGSSHDVFFPYAVRGPGGKVAITTPALHYSPVFYSIINTGNLEGLEPYID
CCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCHHCHHHHHHHCCCCCCCCCCCCC
TDSGVPMVSPTYPITFDGKRIAVIGADIPLGWLAPLLKTVHIAQGSTVSLLSDQGFWIVT
CCCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEE
PNSSQVMKHYDASSDATVQKAITQHTLTIARDFNDGAVDRIIVPIRIDDFGIYWTLIVDV
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEEECCCEEEEEEEEC
PSDAITKPVWNTVFSLVVPGVTLILLSIVVMWLTFNRMLSTPLRNLLRSVSELERGEYNG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TVYGTRRSDEIGAMARGLEGFRGSLLRAQQADAEARQARQQNEAMQAARRREDEQRLKDG
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
NRVIKTIGAALDDLANGDLSARVHDALPREFEPLRDNFNRSVQQLAIAIGGISEAVSVIR
HHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
KGSQVVSGGAEELAERTEQQAAALEETTSAINQIARNVSQSEEIITQTQTVGLKACRSAE
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SSSDIMGRTRKAMQRIETSSAEVVAIIEIIEGIAFQTNILALNASIEAASAGNAGKGFAV
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHEEEEEEEECCCCCCCCCCCCCCHHH
VANEVRSLAQRSAEAAKGISSLVNKTVEEIHEGATCVRDTERALQDISSLVSTMGEKLNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVHSAREQSSSLREVTTAVNVMDQTTQKNASIADNSRSSSRSLTEETQKLTDLITHFKLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
GSENSDIQAWHGEVIHLAERVHERSGFNR
CCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]