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The map label for this gene is 162148395

Identifier: 162148395

GI number: 162148395

Start: 2704238

End: 2704996

Strand: Reverse

Name: 162148395

Synonym: GDI_2614

Alternate gene names: NA

Gene position: 2704996-2704238 (Counterclockwise)

Preceding gene: 162148396

Following gene: 162148379

Centisome position: 68.58

GC content: 70.36

Gene sequence:

>759_bases
ATGACGCCCGGACCGACGATCGGGCGCGCCATGGTGGCGGCGCTGGCCCTGGCGGTATCCACGGCGGCGTGGGCAGGTCC
GATGCAGGACCTGGCCTTCACCCAGCGCCAGGGGGCGATCGTGCCGCTCGATGCGCGTTTTACCGACACGGCGGGGCGCA
CCCTGCCGCTGGGCGCGTTCATGGACGGCCATCCGGCGATCCTGTCGATCGGCTATTACACCTGCCCCAATCTGTGCGCG
CTGGAACGCGAGGACCTGCTGCACGCGCTGGATGCCGGCGGCCTGAAGACGCCCGACGATTACACGTTGATCGTCGTCAG
CATCGACCCGGCCGAAACCGCCGCCATGGCGCGGCAGGCCCGGCAGGACGACCTGGCCAGCCACGCCACCCCGGGCGCCG
ACCGGGGCTGGCATTTCCTGGTCGGGCAGACGGCGTCGATCGCGCGCCTGTCCCAGGCGGTGGGGTTCCACGCGCGGTAC
GATCCGGCATTGAAGCAGTATCTGCACCCGATGGGACTGGTCTTCATGACGCCGGCCGGCATGGTCTCGGGCTACGTGCT
GGGGGTCGGCTACCGCCCCGGCGATGTCCGGCAGGCCCTGGCGCGGGCGGCGGCGGGACAGCGGGCCGAGGCGTCGCCGG
TCCTGCTGCTGTGCTTCCATTACGATGCCGCCACCGGGCGCTACACGCTGGCTGAAGCGGGCCGGCAGGTTTGGAACAGC
AGGACACCAGGAATGGAACCCATTTCTCCGGGGTTCTGA

Upstream 100 bases:

>100_bases
ATCGCGCGGGCGGGGTGGCCCACGTGCCGATCGACCAGGCGATGCGGCAGGTGGCGCGCGACGGTATTCCGGACTGGCCA
TCCGCCGGGGCGGACCGGCC

Downstream 100 bases:

>100_bases
GGGACCGTTAAGGGCGTAATTAGGCCCCACTTAGTTCGAAATCAGTACCTCCCCACGTTGCCCGCGCGCATGGCTTTCCC
GGCAGTTTATCCGTGCGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: SCO1/SenC Family Protein; SCO1/SenC/PrrC Family Protein; SenC/PrrC; Cytochrome C Oxidase Synthesis Factor; SenC/PrrC-Like; Respiratory System Biogenesis Protein

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTPGPTIGRAMVAALALAVSTAAWAGPMQDLAFTQRQGAIVPLDARFTDTAGRTLPLGAFMDGHPAILSIGYYTCPNLCA
LEREDLLHALDAGGLKTPDDYTLIVVSIDPAETAAMARQARQDDLASHATPGADRGWHFLVGQTASIARLSQAVGFHARY
DPALKQYLHPMGLVFMTPAGMVSGYVLGVGYRPGDVRQALARAAAGQRAEASPVLLLCFHYDAATGRYTLAEAGRQVWNS
RTPGMEPISPGF

Sequences:

>Translated_252_residues
MTPGPTIGRAMVAALALAVSTAAWAGPMQDLAFTQRQGAIVPLDARFTDTAGRTLPLGAFMDGHPAILSIGYYTCPNLCA
LEREDLLHALDAGGLKTPDDYTLIVVSIDPAETAAMARQARQDDLASHATPGADRGWHFLVGQTASIARLSQAVGFHARY
DPALKQYLHPMGLVFMTPAGMVSGYVLGVGYRPGDVRQALARAAAGQRAEASPVLLLCFHYDAATGRYTLAEAGRQVWNS
RTPGMEPISPGF
>Mature_251_residues
TPGPTIGRAMVAALALAVSTAAWAGPMQDLAFTQRQGAIVPLDARFTDTAGRTLPLGAFMDGHPAILSIGYYTCPNLCAL
EREDLLHALDAGGLKTPDDYTLIVVSIDPAETAAMARQARQDDLASHATPGADRGWHFLVGQTASIARLSQAVGFHARYD
PALKQYLHPMGLVFMTPAGMVSGYVLGVGYRPGDVRQALARAAAGQRAEASPVLLLCFHYDAATGRYTLAEAGRQVWNSR
TPGMEPISPGF

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26708; Mature: 26577

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPGPTIGRAMVAALALAVSTAAWAGPMQDLAFTQRQGAIVPLDARFTDTAGRTLPLGAF
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCEEECCCC
MDGHPAILSIGYYTCPNLCALEREDLLHALDAGGLKTPDDYTLIVVSIDPAETAAMARQA
CCCCCCEEEECCCCCCCHHHHCHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHH
RQDDLASHATPGADRGWHFLVGQTASIARLSQAVGFHARYDPALKQYLHPMGLVFMTPAG
HHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEECCHH
MVSGYVLGVGYRPGDVRQALARAAAGQRAEASPVLLLCFHYDAATGRYTLAEAGRQVWNS
HHCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCC
RTPGMEPISPGF
CCCCCCCCCCCC
>Mature Secondary Structure 
TPGPTIGRAMVAALALAVSTAAWAGPMQDLAFTQRQGAIVPLDARFTDTAGRTLPLGAF
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCEEECCCC
MDGHPAILSIGYYTCPNLCALEREDLLHALDAGGLKTPDDYTLIVVSIDPAETAAMARQA
CCCCCCEEEECCCCCCCHHHHCHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHH
RQDDLASHATPGADRGWHFLVGQTASIARLSQAVGFHARYDPALKQYLHPMGLVFMTPAG
HHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEECCHH
MVSGYVLGVGYRPGDVRQALARAAAGQRAEASPVLLLCFHYDAATGRYTLAEAGRQVWNS
HHCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCC
RTPGMEPISPGF
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA