| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is ymfQ [C]
Identifier: 162148389
GI number: 162148389
Start: 2699432
End: 2700121
Strand: Direct
Name: ymfQ [C]
Synonym: GDI_2608
Alternate gene names: 162148389
Gene position: 2699432-2700121 (Clockwise)
Preceding gene: 162148388
Following gene: 162148390
Centisome position: 68.44
GC content: 65.36
Gene sequence:
>690_bases ATGAGCCGCACGGCCGACCAGATCGTCGATCAGTGGCTGCACCAGCTCTCGCCTCCGGGTCGCGCGTTTCCGAAAATCGC GGGCAGCAATCTGGCCGGGCTTTACCGCGCCATGGCGCTGACGCGCGCGCAGACCGAAGCCGACCTGGACGCGCTGAAGC TGGAGATTTCGCCCCAGACCAGCACGCTGCTGCTGTCGGATTACGAGGCCGTCCTGGGGCCCGACCCATGCGGCCGCGAC CAACTGGTGACTACGGTGGCCGAGCGCCAGGCGCTGGACTTCCAGCGCTGGACGTATGCCGGCGGCCAGAGCATCGATTT CTACACCCAGATGGCCGCCTCGGTCGGTGTGACCATCACGATCGACGAACCCGAGCCCGCGATCTGCGGCGCGGCCGTCT GCGGCGTCGATGTCTGTAGCCAGGAAACGGACCGGTTCATCTGGGTCGTCAATATCCAGCCCGGCAATACGGGTCTGGAG CCCGAGGCGGCGATCTGCGGAATCGGTGTCTCCGGCGTCACGGTCTGCGGCGACATCCTGCCGCCGGCGATCGCAAACGA AGCGGCAATGCTGATCTGTCCGATCCAGACAATGAGCCCTGCCGATACCACCGTGGTCTTCGGGTTCGGACCAGGCCCGA CAGGGGCGGTCCTAGATACCTTCAACCTCAATGTGGATGCGATCTCGTGA
Upstream 100 bases:
>100_bases TCGCGGGCGAGGAAAACGACCTGGTCTCGCCGACCGCCGACCAGGCGTTCGGCGCCAACCAGATGCCCGTTCTGGGCACG ATCGCATGGCAGGCGCCGTC
Downstream 100 bases:
>100_bases TCGCGTCTGATGCAGGATCTCTGTAATGGATTACACAAGCGCGGCGAACTACGTCACGGACAGCCAGGGGCGCAGACAAT ACGCAGACCGGGATATCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSRTADQIVDQWLHQLSPPGRAFPKIAGSNLAGLYRAMALTRAQTEADLDALKLEISPQTSTLLLSDYEAVLGPDPCGRD QLVTTVAERQALDFQRWTYAGGQSIDFYTQMAASVGVTITIDEPEPAICGAAVCGVDVCSQETDRFIWVVNIQPGNTGLE PEAAICGIGVSGVTVCGDILPPAIANEAAMLICPIQTMSPADTTVVFGFGPGPTGAVLDTFNLNVDAIS
Sequences:
>Translated_229_residues MSRTADQIVDQWLHQLSPPGRAFPKIAGSNLAGLYRAMALTRAQTEADLDALKLEISPQTSTLLLSDYEAVLGPDPCGRD QLVTTVAERQALDFQRWTYAGGQSIDFYTQMAASVGVTITIDEPEPAICGAAVCGVDVCSQETDRFIWVVNIQPGNTGLE PEAAICGIGVSGVTVCGDILPPAIANEAAMLICPIQTMSPADTTVVFGFGPGPTGAVLDTFNLNVDAIS >Mature_228_residues SRTADQIVDQWLHQLSPPGRAFPKIAGSNLAGLYRAMALTRAQTEADLDALKLEISPQTSTLLLSDYEAVLGPDPCGRDQ LVTTVAERQALDFQRWTYAGGQSIDFYTQMAASVGVTITIDEPEPAICGAAVCGVDVCSQETDRFIWVVNIQPGNTGLEP EAAICGIGVSGVTVCGDILPPAIANEAAMLICPIQTMSPADTTVVFGFGPGPTGAVLDTFNLNVDAIS
Specific function: Unknown
COG id: COG3778
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24089; Mature: 23957
Theoretical pI: Translated: 3.86; Mature: 3.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTADQIVDQWLHQLSPPGRAFPKIAGSNLAGLYRAMALTRAQTEADLDALKLEISPQT CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCC STLLLSDYEAVLGPDPCGRDQLVTTVAERQALDFQRWTYAGGQSIDFYTQMAASVGVTIT CEEEEECCHHHCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHCCEEEE IDEPEPAICGAAVCGVDVCSQETDRFIWVVNIQPGNTGLEPEAAICGIGVSGVTVCGDIL ECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHC PPAIANEAAMLICPIQTMSPADTTVVFGFGPGPTGAVLDTFNLNVDAIS CCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEECEEEEEC >Mature Secondary Structure SRTADQIVDQWLHQLSPPGRAFPKIAGSNLAGLYRAMALTRAQTEADLDALKLEISPQT CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCC STLLLSDYEAVLGPDPCGRDQLVTTVAERQALDFQRWTYAGGQSIDFYTQMAASVGVTIT CEEEEECCHHHCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHCCEEEE IDEPEPAICGAAVCGVDVCSQETDRFIWVVNIQPGNTGLEPEAAICGIGVSGVTVCGDIL ECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHC PPAIANEAAMLICPIQTMSPADTTVVFGFGPGPTGAVLDTFNLNVDAIS CCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEECEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA