Click here to switch to the map view.

The map label for this gene is gumB [H]

Identifier: 162148335

GI number: 162148335

Start: 2650589

End: 2651242

Strand: Direct

Name: gumB [H]

Synonym: GDI_2552

Alternate gene names: 162148335

Gene position: 2650589-2651242 (Clockwise)

Preceding gene: 162148334

Following gene: 162148336

Centisome position: 67.2

GC content: 68.5

Gene sequence:

>654_bases
ATGATGACCGCGCCGACGCACCGCCCGCCCCACACGGACTGCCGCCCCGCGATCCGCCGTCGCGCGCACCCCCATCGCGC
ACGGCCCCATCGCACACGTCTGGGTGCCGGAATGCTGGTGGTGGCGCTGTCCGTCCTGGGCGGCTGTGCCCCGGGCAGCG
ACCTGGCCCCGCTGCCGCCGCCGGCCAGCACGGCCTATCGCCTGGGGGCGGGCGACCAGTTGCGGGTCCTGACCTATAAC
GACCTGCAGCTCAGCAATACGTTTACCGTTGGGGATAACGGGCAGATCGCCTTTCCGCTGATCGGCTCGGTCGCCGCCGC
CGGGCTGACGACGCATGACCTGGCGTCCACGATCGCAGGGCGGCTGAGCAGCAGCGGCATCCTGACGCACCCCAGCGTGT
CGGTCGAGATCGTACAGTATCGTCCCATCTTTGTGCTGGGCGAAGTCGCGCATCCGGGCCAGTATCCCTACATGCCCGGC
ATGACCACCCTCAGCGCCGTGGCGCTCGCCGGCGGATACACCTATCGCGCGATCACCGATTACGCGGGCGACGTGCGCAG
CGACCCGGGGGGCCATGCGGTCGAGGGACGGGTGAAGCGCGATTCCATGCTGCAGCCCGGCGACGTCATCACAATCTATG
AACGGTATTTCTAA

Upstream 100 bases:

>100_bases
CCCGACCCGCTCTTTGCCGACCAGAGATCGACTTTCGCCAGCAATTATATCGCACTCGGGGTCAGCTTCGCCGAATGACC
CGTGCCATGACCGGAGGATA

Downstream 100 bases:

>100_bases
GACCCCTTGCAATCTCGCCGCAAGACGCAACGTCGGACGGACGGGCCGCTCAAGCAGGGAGCATGTGCCATGCCACGCGG
GGACAAATCCACCTATACCG

Product: exopolysaccharide production protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MMTAPTHRPPHTDCRPAIRRRAHPHRARPHRTRLGAGMLVVALSVLGGCAPGSDLAPLPPPASTAYRLGAGDQLRVLTYN
DLQLSNTFTVGDNGQIAFPLIGSVAAAGLTTHDLASTIAGRLSSSGILTHPSVSVEIVQYRPIFVLGEVAHPGQYPYMPG
MTTLSAVALAGGYTYRAITDYAGDVRSDPGGHAVEGRVKRDSMLQPGDVITIYERYF

Sequences:

>Translated_217_residues
MMTAPTHRPPHTDCRPAIRRRAHPHRARPHRTRLGAGMLVVALSVLGGCAPGSDLAPLPPPASTAYRLGAGDQLRVLTYN
DLQLSNTFTVGDNGQIAFPLIGSVAAAGLTTHDLASTIAGRLSSSGILTHPSVSVEIVQYRPIFVLGEVAHPGQYPYMPG
MTTLSAVALAGGYTYRAITDYAGDVRSDPGGHAVEGRVKRDSMLQPGDVITIYERYF
>Mature_217_residues
MMTAPTHRPPHTDCRPAIRRRAHPHRARPHRTRLGAGMLVVALSVLGGCAPGSDLAPLPPPASTAYRLGAGDQLRVLTYN
DLQLSNTFTVGDNGQIAFPLIGSVAAAGLTTHDLASTIAGRLSSSGILTHPSVSVEIVQYRPIFVLGEVAHPGQYPYMPG
MTTLSAVALAGGYTYRAITDYAGDVRSDPGGHAVEGRVKRDSMLQPGDVITIYERYF

Specific function: Involved in succinoglycan (EPS I) synthesis. Needed for the addition of the first sugar (galactose) to the isoprenoid carrier [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 23082; Mature: 23082

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTAPTHRPPHTDCRPAIRRRAHPHRARPHRTRLGAGMLVVALSVLGGCAPGSDLAPLPP
CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCC
PASTAYRLGAGDQLRVLTYNDLQLSNTFTVGDNGQIAFPLIGSVAAAGLTTHDLASTIAG
CCCCEEEECCCCEEEEEEECCEEECCEEEECCCCCEEHHHHHHHHHCCCCHHHHHHHHHH
RLSSSGILTHPSVSVEIVQYRPIFVLGEVAHPGQYPYMPGMTTLSAVALAGGYTYRAITD
HHCCCCEEECCCCEEEEEEECCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEHHH
YAGDVRSDPGGHAVEGRVKRDSMLQPGDVITIYERYF
HCCCCCCCCCCCEEECEECCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MMTAPTHRPPHTDCRPAIRRRAHPHRARPHRTRLGAGMLVVALSVLGGCAPGSDLAPLPP
CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCC
PASTAYRLGAGDQLRVLTYNDLQLSNTFTVGDNGQIAFPLIGSVAAAGLTTHDLASTIAG
CCCCEEEECCCCEEEEEEECCEEECCEEEECCCCCEEHHHHHHHHHCCCCHHHHHHHHHH
RLSSSGILTHPSVSVEIVQYRPIFVLGEVAHPGQYPYMPGMTTLSAVALAGGYTYRAITD
HHCCCCEEECCCCEEEEEEECCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEHHH
YAGDVRSDPGGHAVEGRVKRDSMLQPGDVITIYERYF
HCCCCCCCCCCCEEECEECCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8439670; 11481431 [H]