| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is exoO [H]
Identifier: 162148327
GI number: 162148327
Start: 2640613
End: 2641590
Strand: Direct
Name: exoO [H]
Synonym: GDI_2544
Alternate gene names: 162148327
Gene position: 2640613-2641590 (Clockwise)
Preceding gene: 162148326
Following gene: 162148328
Centisome position: 66.95
GC content: 70.14
Gene sequence:
>978_bases ATGACCGGCCGGATCGCCGTTTCCGTCATCATCCCGGTCTACAATGCCGCCCGCTTCGTCGAACGGGCCATCGGGTCCGT CCTGGCGCAGAGCCTGCCGGCGGCGGAAATCCTGGTCGTCGATGATTGTTCGACCGATACGACCCTGGCGGTGGTCGAGG CCCTGGCGCTGCGCCACCCCCACATCCGCCCGCTGCGCATGGCGCGGAACGGCGGGCCGGCGGGGGCGCGCAATATGGGC ATCGCCCACGCCACGGGCGACTGGATCGCGATCCTCGACGCGGATGACGCCTATGCGTCCGACCGGCTGGACACGATGGC GGACATGGCGGCGCAGGACCCGGCGGCCGACATCCTGGCGGACGACCTGCTCTATTACGACGCTGTGGCCGGGCAGGTGA CGGGACGCGCCATGGGACCGCGCGCCATGCCGCCGCCACCGGTAACGCTGGACGACTATCTGGCCCATAACCTGGCCGAC GGGCGGGGCGTGGACTGGGGGTTGCTGAAGCCCGTCATCCGGCGCGACCTGCTGGTCCAATCGGGTATCCGCTATCCCGT CGGGCAGCGCCATGGCGAGGACTTCACCTTCATGGTGACGCTGCTGCTGCACGGGGCGCGGATGCGGATCCTGGACACGG CGCATTACCTCTACACCCAGCGCGAGGGCACGATCAGCCGTCGGGCGTCGGACATGACGCGCACGACGATCGCTACGGCG CGCTGGCGCAGGCGGCGATCGACCTGGCGGACGCCCCCGCGATCCGTGCGGATCCCCCGGCTGACGGCGATGCTTCTGGC ACGGGCAGAAGGGCTCAGGCGGCTGGATGACGCCCATTTCTTTTCGCAGGCGATCCGGCGCGGAGCGGTCGGCGCCCTGG CGGCGCGGGCCGTGAAACGCCCGTCTTTTGTACCGCGCATGGGGTGGCAGATCGGGCGCGCGATGCAACGCCGGGTCGCG CAATGGCGTTCGGCATGA
Upstream 100 bases:
>100_bases CGCTTCGTCCAGCGGAAGCATGACATCCGGCTCTGCACGGCGGCACTGGAGGATCTGTACGACGAACTGGCGAGGATCGA CGCATGACGAGGACCAGCGC
Downstream 100 bases:
>100_bases CCGGCGGCGCCCCCCATGGACCCATCATGAAGCAGAGGAGTGGATCATGCAGACCGCAATGATTGGCGGCGGGTACGTCG GACTGGTGTCCGGCGCCTGC
Product: succinoglycan biosynthesis protein exoO
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MTGRIAVSVIIPVYNAARFVERAIGSVLAQSLPAAEILVVDDCSTDTTLAVVEALALRHPHIRPLRMARNGGPAGARNMG IAHATGDWIAILDADDAYASDRLDTMADMAAQDPAADILADDLLYYDAVAGQVTGRAMGPRAMPPPPVTLDDYLAHNLAD GRGVDWGLLKPVIRRDLLVQSGIRYPVGQRHGEDFTFMVTLLLHGARMRILDTAHYLYTQREGTISRRASDMTRTTIATA RWRRRRSTWRTPPRSVRIPRLTAMLLARAEGLRRLDDAHFFSQAIRRGAVGALAARAVKRPSFVPRMGWQIGRAMQRRVA QWRSA
Sequences:
>Translated_325_residues MTGRIAVSVIIPVYNAARFVERAIGSVLAQSLPAAEILVVDDCSTDTTLAVVEALALRHPHIRPLRMARNGGPAGARNMG IAHATGDWIAILDADDAYASDRLDTMADMAAQDPAADILADDLLYYDAVAGQVTGRAMGPRAMPPPPVTLDDYLAHNLAD GRGVDWGLLKPVIRRDLLVQSGIRYPVGQRHGEDFTFMVTLLLHGARMRILDTAHYLYTQREGTISRRASDMTRTTIATA RWRRRRSTWRTPPRSVRIPRLTAMLLARAEGLRRLDDAHFFSQAIRRGAVGALAARAVKRPSFVPRMGWQIGRAMQRRVA QWRSA >Mature_324_residues TGRIAVSVIIPVYNAARFVERAIGSVLAQSLPAAEILVVDDCSTDTTLAVVEALALRHPHIRPLRMARNGGPAGARNMGI AHATGDWIAILDADDAYASDRLDTMADMAAQDPAADILADDLLYYDAVAGQVTGRAMGPRAMPPPPVTLDDYLAHNLADG RGVDWGLLKPVIRRDLLVQSGIRYPVGQRHGEDFTFMVTLLLHGARMRILDTAHYLYTQREGTISRRASDMTRTTIATAR WRRRRSTWRTPPRSVRIPRLTAMLLARAEGLRRLDDAHFFSQAIRRGAVGALAARAVKRPSFVPRMGWQIGRAMQRRVAQ WRSA
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the fifth sugar (glucose), catalyzes the formation of a beta-1,6 linkage between the fourth and fifth sugar [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=227, Percent_Identity=29.0748898678414, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI1787259, Length=90, Percent_Identity=36.6666666666667, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 35902; Mature: 35771
Theoretical pI: Translated: 11.35; Mature: 11.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRIAVSVIIPVYNAARFVERAIGSVLAQSLPAAEILVVDDCSTDTTLAVVEALALRHP CCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCC HIRPLRMARNGGPAGARNMGIAHATGDWIAILDADDAYASDRLDTMADMAAQDPAADILA CCCHHHHHCCCCCCCCCCCCCEEECCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHH DDLLYYDAVAGQVTGRAMGPRAMPPPPVTLDDYLAHNLADGRGVDWGLLKPVIRRDLLVQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH SGIRYPVGQRHGEDFTFMVTLLLHGARMRILDTAHYLYTQREGTISRRASDMTRTTIATA CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RWRRRRSTWRTPPRSVRIPRLTAMLLARAEGLRRLDDAHFFSQAIRRGAVGALAARAVKR HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC PSFVPRMGWQIGRAMQRRVAQWRSA CCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TGRIAVSVIIPVYNAARFVERAIGSVLAQSLPAAEILVVDDCSTDTTLAVVEALALRHP CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCC HIRPLRMARNGGPAGARNMGIAHATGDWIAILDADDAYASDRLDTMADMAAQDPAADILA CCCHHHHHCCCCCCCCCCCCCEEECCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHH DDLLYYDAVAGQVTGRAMGPRAMPPPPVTLDDYLAHNLADGRGVDWGLLKPVIRRDLLVQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH SGIRYPVGQRHGEDFTFMVTLLLHGARMRILDTAHYLYTQREGTISRRASDMTRTTIATA CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RWRRRRSTWRTPPRSVRIPRLTAMLLARAEGLRRLDDAHFFSQAIRRGAVGALAARAVKR HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC PSFVPRMGWQIGRAMQRRVAQWRSA CCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226645; 8246891; 11481431 [H]