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The map label for this gene is yhjB [H]

Identifier: 162148298

GI number: 162148298

Start: 2609810

End: 2611192

Strand: Reverse

Name: yhjB [H]

Synonym: GDI_2515

Alternate gene names: 162148298

Gene position: 2611192-2609810 (Counterclockwise)

Preceding gene: 162148299

Following gene: 162148297

Centisome position: 66.2

GC content: 67.32

Gene sequence:

>1383_bases
ATGTCAAGTGTGACGTTCTGCCTCGTGATCCTGCTGTCGCTGGGGATCGCGCTTTATTCCCGGCGAGGGCACCATCACCA
GGGAACGCGGGATTTCTTCGTCGCCTCGGGGCAGTTCGGCGGTGCGCTGCTGTTCTTCCTGGCGGTGGGCGAGACGTACA
GCATCGGCACCGTGCTGGGCTTTCCCGCCGGCACGGTCAGCCACGGCACGGCGTTCGTACTCTGGTTCCTCAGCTACATC
GTGCTGGCCTTTCCGGTGGGGTATTTCCTCAATCCCAGGATCTGGCAGGCCGGACAGGCCTGCAATGCCCTGACCCTGGC
GGACCTGTTCCGCCACCATGTCGGCAGCCGGGCGGTCGAAATCGCCATGGCGCTGAATGCCATCCTGTTCCTGTTGCCGT
TCGGCGACATGCAGTTCGTCGGCCTGCTGACGGTGCTGCAGGGCTTCGGCTGGCAGGTGCCCAGCATCCTGCTGACGACG
CTGGCGGCGGTGATGGCGTTCTTCTGGGTCGCGCTGTCGGGGATACGCGCCCCGGCCTATGTCTCGATCCTGAAGGATGT
GCTGACGATCGTCGCGGTGGTGGCGGTCGGCGGCGCGGCCCTGCTGGCCATGGGCCACCTGCCGGACCCGCACCAGGCCG
GGCGGGCGGTCGGGCAGGACATCGCGGATATCCGTCCCACCGGGCGGGACGAGGCCTTCGCCATGTCCACCGTCATCCTG
CAGTCGATCGGCTTCTGCGTCGCGCCGCAGACGGTGGCGTTCCTGTTCACCGGGCGCTCGCGGCGGATCGTCCGGCGCAA
CCAGGTCCTGATGCCGCTCTATATGCTGATGTTCCCGTTCCTGTACCTGGTCGCCGAGTATGCGCGCCGGTCGGGCATGG
CGCTGCCCACGCCGAACGATGCGTTCATGACCGTGTCGCTGGCGCTGCTGCCCGGCTGGATGGACGGGCTGGTGGCCGCG
GCCTGCACCCTGTCGGCGCTGGTGGTCCTGGCCGGAACGTGCCTGGCGATCGGTTCGCTGGTATCGCACAACCTGCTGCA
TGGCCTGTCGGATCGCCAGCAGCGCTACGGCGCGCAGGTCGTGATCGCGCTCTATCTGCTGTTTTCGGTCGTCAGCGCGG
CACACGCGTCCGGCGTCCTGGTCAAGCTGAACACCATGTATTATTTTGGCGTGACGCAGGCGGCGCCCGGCCTGTTCGCT
ATCCTGCTTGCCCGGCCGGTCAGACCGGCGGCGCTGGTCGCCGGATTGCTGGCCGGGGACGGGCTTTCGGTCGGACTGTA
TCTGGGCGGTGTCGATCTGGGCGGGATCAATCCCGGACTTGTGGGGCTGGTGGCCAACGCCGCCATCCTGTGGGCCGGCA
GTTACATGCCGCGGCGCCGCTGA

Upstream 100 bases:

>100_bases
GACGGCCTGGCTGTTCGCGTGGTTCGTCCTGACCTCCGCCTGCCTGGGCACGGTATGGGTCCTGCATGACCGCCATCTCG
GCGATGACGACTGACATCCC

Downstream 100 bases:

>100_bases
CACGCCGGCATCGTGGCGGAATTCCGTCGCGGGCGGGAAACTTTCATCGCCGGAAGATGTTGCTTTCGCGGTCGCATCAA
TGATCCGCGTGCCGAATGAT

Product: sodium/substrate symport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MSSVTFCLVILLSLGIALYSRRGHHHQGTRDFFVASGQFGGALLFFLAVGETYSIGTVLGFPAGTVSHGTAFVLWFLSYI
VLAFPVGYFLNPRIWQAGQACNALTLADLFRHHVGSRAVEIAMALNAILFLLPFGDMQFVGLLTVLQGFGWQVPSILLTT
LAAVMAFFWVALSGIRAPAYVSILKDVLTIVAVVAVGGAALLAMGHLPDPHQAGRAVGQDIADIRPTGRDEAFAMSTVIL
QSIGFCVAPQTVAFLFTGRSRRIVRRNQVLMPLYMLMFPFLYLVAEYARRSGMALPTPNDAFMTVSLALLPGWMDGLVAA
ACTLSALVVLAGTCLAIGSLVSHNLLHGLSDRQQRYGAQVVIALYLLFSVVSAAHASGVLVKLNTMYYFGVTQAAPGLFA
ILLARPVRPAALVAGLLAGDGLSVGLYLGGVDLGGINPGLVGLVANAAILWAGSYMPRRR

Sequences:

>Translated_460_residues
MSSVTFCLVILLSLGIALYSRRGHHHQGTRDFFVASGQFGGALLFFLAVGETYSIGTVLGFPAGTVSHGTAFVLWFLSYI
VLAFPVGYFLNPRIWQAGQACNALTLADLFRHHVGSRAVEIAMALNAILFLLPFGDMQFVGLLTVLQGFGWQVPSILLTT
LAAVMAFFWVALSGIRAPAYVSILKDVLTIVAVVAVGGAALLAMGHLPDPHQAGRAVGQDIADIRPTGRDEAFAMSTVIL
QSIGFCVAPQTVAFLFTGRSRRIVRRNQVLMPLYMLMFPFLYLVAEYARRSGMALPTPNDAFMTVSLALLPGWMDGLVAA
ACTLSALVVLAGTCLAIGSLVSHNLLHGLSDRQQRYGAQVVIALYLLFSVVSAAHASGVLVKLNTMYYFGVTQAAPGLFA
ILLARPVRPAALVAGLLAGDGLSVGLYLGGVDLGGINPGLVGLVANAAILWAGSYMPRRR
>Mature_459_residues
SSVTFCLVILLSLGIALYSRRGHHHQGTRDFFVASGQFGGALLFFLAVGETYSIGTVLGFPAGTVSHGTAFVLWFLSYIV
LAFPVGYFLNPRIWQAGQACNALTLADLFRHHVGSRAVEIAMALNAILFLLPFGDMQFVGLLTVLQGFGWQVPSILLTTL
AAVMAFFWVALSGIRAPAYVSILKDVLTIVAVVAVGGAALLAMGHLPDPHQAGRAVGQDIADIRPTGRDEAFAMSTVILQ
SIGFCVAPQTVAFLFTGRSRRIVRRNQVLMPLYMLMFPFLYLVAEYARRSGMALPTPNDAFMTVSLALLPGWMDGLVAAA
CTLSALVVLAGTCLAIGSLVSHNLLHGLSDRQQRYGAQVVIALYLLFSVVSAAHASGVLVKLNTMYYFGVTQAAPGLFAI
LLARPVRPAALVAGLLAGDGLSVGLYLGGVDLGGINPGLVGLVANAAILWAGSYMPRRR

Specific function: Unknown

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 48857; Mature: 48726

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVTFCLVILLSLGIALYSRRGHHHQGTRDFFVASGQFGGALLFFLAVGETYSIGTVLG
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEEE
FPAGTVSHGTAFVLWFLSYIVLAFPVGYFLNPRIWQAGQACNALTLADLFRHHVGSRAVE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHCHHHHH
IAMALNAILFLLPFGDMQFVGLLTVLQGFGWQVPSILLTTLAAVMAFFWVALSGIRAPAY
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VSILKDVLTIVAVVAVGGAALLAMGHLPDPHQAGRAVGQDIADIRPTGRDEAFAMSTVIL
HHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHH
QSIGFCVAPQTVAFLFTGRSRRIVRRNQVLMPLYMLMFPFLYLVAEYARRSGMALPTPND
HHHCCCCCCHHHEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AFMTVSLALLPGWMDGLVAAACTLSALVVLAGTCLAIGSLVSHNLLHGLSDRQQRYGAQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIALYLLFSVVSAAHASGVLVKLNTMYYFGVTQAAPGLFAILLARPVRPAALVAGLLAGD
HHHHHHHHHHHHHHHHCCEEEEEEEEEEEEHHHHCHHHHHHHHHCCCCHHHHHHHHHHCC
GLSVGLYLGGVDLGGINPGLVGLVANAAILWAGSYMPRRR
CCEEEEEEECEEECCCCCHHHHHHHHHHHHEECCCCCCCC
>Mature Secondary Structure 
SSVTFCLVILLSLGIALYSRRGHHHQGTRDFFVASGQFGGALLFFLAVGETYSIGTVLG
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEEE
FPAGTVSHGTAFVLWFLSYIVLAFPVGYFLNPRIWQAGQACNALTLADLFRHHVGSRAVE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHCHHHHH
IAMALNAILFLLPFGDMQFVGLLTVLQGFGWQVPSILLTTLAAVMAFFWVALSGIRAPAY
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VSILKDVLTIVAVVAVGGAALLAMGHLPDPHQAGRAVGQDIADIRPTGRDEAFAMSTVIL
HHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHH
QSIGFCVAPQTVAFLFTGRSRRIVRRNQVLMPLYMLMFPFLYLVAEYARRSGMALPTPND
HHHCCCCCCHHHEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AFMTVSLALLPGWMDGLVAAACTLSALVVLAGTCLAIGSLVSHNLLHGLSDRQQRYGAQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIALYLLFSVVSAAHASGVLVKLNTMYYFGVTQAAPGLFAILLARPVRPAALVAGLLAGD
HHHHHHHHHHHHHHHHCCEEEEEEEEEEEEHHHHCHHHHHHHHHCCCCHHHHHHHHHHCC
GLSVGLYLGGVDLGGINPGLVGLVANAAILWAGSYMPRRR
CCEEEEEEECEEECCCCCHHHHHHHHHHHHEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]