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The map label for this gene is rfbU [H]

Identifier: 162148277

GI number: 162148277

Start: 2587607

End: 2588692

Strand: Direct

Name: rfbU [H]

Synonym: GDI_2494

Alternate gene names: 162148277

Gene position: 2587607-2588692 (Clockwise)

Preceding gene: 162148276

Following gene: 162148278

Centisome position: 65.61

GC content: 69.15

Gene sequence:

>1086_bases
ATGCAGTCCGCGCTTTACGTCAACAGCCGCTTCCTGACCCAGCCCCTGAGCGGCGTGCAGCGCTTCGCGACCGAGATCAC
CAGCGCCATCGGCCGGGTCTGGAGCGCCAATGACGTCAGCCGCCCCATCCTGCTGACCCCGGCGGCGGCATTGATCGCGG
ACGGCCCCGGGGATCTGGAGCGCCAGTTCGTCGGACGCCGGCAGGGACAGATCTGGGAGCAGATCGACCTGCCGCGCCGG
GCCCGGGACGGCGTGCTGCTGAACCTGGGCAACACGGCCCCCATCATGGGGCGGCGGCAACTGGTGGTCTTGCATGACGC
AGGCATTTTCAGCCAGCCCGACGCCTATTCGTGGCGCTTCCGCCTGTGGTACCGCGTCCTGCACAACCTGCTGCTGCGTA
CGCGCTCGCGCCTGGTCACGGTGTCGGAATTTTCCCGCGGGGAACTGGCGCGCCACCTCGGCGTCGTGGCGGAGCGTTTC
GCGGTGATCCCCGAAGGGGCAGATCATATCTCGCGCCTTGCCGCCGACCATGCGGTTCTGGCGCGGCACGGGCTTGCGAC
GGGACGCTATGTCCTGGTCGTCGGCAACCTGGCGCCGCACAAGAACCTGGCCAGCCTGGGCGTGCTGGCGCGCATGCTGG
CCGCCCGCGACATCGCCTTGGTCATCACCGGCGCCCTGAACCGGTCCGTGTTCAACGGGCAGGACGGGATCACGCTGCCC
GCGCCGGCCCATTATATCGGCCGCGTCAGCGACACGGAACTGTGCGCCCTGTACCAGAACGCCGCGTGCTTCGTCTTTCC
GTCCCGATACGAGGGATTCGGCCTGCCGGCGGTCGAGGCCATGGCGTGCGGCTGCCCCGTGGTCGCGTCCTCGATCCCCG
CCCTGCGCGAAGTCTGCGCCGATGCCGCGCTCTATGCCCATCCCGACGACCCCGTCGCGATCGCCAGTACCGTGGCCCGC
GTGATCGACACACCGGGGTTGGCGCAGGACATGCGCATGAAGGGCATGGCACGCGCCGCCGGCTTTACCTGGGACAAGGC
GGCGCGCGCGCTTCTGGACCTGGTGCATGACAGGGAAGCCGCATGA

Upstream 100 bases:

>100_bases
GCCGAGAAGCGCCAGTTGGGGATCTATCGTCAGTACGGCCTGCTGACCTCCTGAATCCGGCCCCACGTCCCTCCAATGCC
GGTATGGGCAGGAGTTTTCA

Downstream 100 bases:

>100_bases
ATGATGCGCCATCCGACAAAACGCCATCTGGCATGGGCCGCCTGCGTGCTTGCCCTCCTTGCGGCGTCGCCCCGCCCGGC
CGTGGCGCAGGATGACCCGA

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MQSALYVNSRFLTQPLSGVQRFATEITSAIGRVWSANDVSRPILLTPAAALIADGPGDLERQFVGRRQGQIWEQIDLPRR
ARDGVLLNLGNTAPIMGRRQLVVLHDAGIFSQPDAYSWRFRLWYRVLHNLLLRTRSRLVTVSEFSRGELARHLGVVAERF
AVIPEGADHISRLAADHAVLARHGLATGRYVLVVGNLAPHKNLASLGVLARMLAARDIALVITGALNRSVFNGQDGITLP
APAHYIGRVSDTELCALYQNAACFVFPSRYEGFGLPAVEAMACGCPVVASSIPALREVCADAALYAHPDDPVAIASTVAR
VIDTPGLAQDMRMKGMARAAGFTWDKAARALLDLVHDREAA

Sequences:

>Translated_361_residues
MQSALYVNSRFLTQPLSGVQRFATEITSAIGRVWSANDVSRPILLTPAAALIADGPGDLERQFVGRRQGQIWEQIDLPRR
ARDGVLLNLGNTAPIMGRRQLVVLHDAGIFSQPDAYSWRFRLWYRVLHNLLLRTRSRLVTVSEFSRGELARHLGVVAERF
AVIPEGADHISRLAADHAVLARHGLATGRYVLVVGNLAPHKNLASLGVLARMLAARDIALVITGALNRSVFNGQDGITLP
APAHYIGRVSDTELCALYQNAACFVFPSRYEGFGLPAVEAMACGCPVVASSIPALREVCADAALYAHPDDPVAIASTVAR
VIDTPGLAQDMRMKGMARAAGFTWDKAARALLDLVHDREAA
>Mature_361_residues
MQSALYVNSRFLTQPLSGVQRFATEITSAIGRVWSANDVSRPILLTPAAALIADGPGDLERQFVGRRQGQIWEQIDLPRR
ARDGVLLNLGNTAPIMGRRQLVVLHDAGIFSQPDAYSWRFRLWYRVLHNLLLRTRSRLVTVSEFSRGELARHLGVVAERF
AVIPEGADHISRLAADHAVLARHGLATGRYVLVVGNLAPHKNLASLGVLARMLAARDIALVITGALNRSVFNGQDGITLP
APAHYIGRVSDTELCALYQNAACFVFPSRYEGFGLPAVEAMACGCPVVASSIPALREVCADAALYAHPDDPVAIASTVAR
VIDTPGLAQDMRMKGMARAAGFTWDKAARALLDLVHDREAA

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 39154; Mature: 39154

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSALYVNSRFLTQPLSGVQRFATEITSAIGRVWSANDVSRPILLTPAAALIADGPGDLE
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHCCCCCHHH
RQFVGRRQGQIWEQIDLPRRARDGVLLNLGNTAPIMGRRQLVVLHDAGIFSQPDAYSWRF
HHHHHHHCCCHHHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHH
RLWYRVLHNLLLRTRSRLVTVSEFSRGELARHLGVVAERFAVIPEGADHISRLAADHAVL
HHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ARHGLATGRYVLVVGNLAPHKNLASLGVLARMLAARDIALVITGALNRSVFNGQDGITLP
HHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEHHHCCCEECCCCCEECC
APAHYIGRVSDTELCALYQNAACFVFPSRYEGFGLPAVEAMACGCPVVASSIPALREVCA
CCHHHHCCCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCCHHHHHCCHHHHHHHH
DAALYAHPDDPVAIASTVARVIDTPGLAQDMRMKGMARAAGFTWDKAARALLDLVHDREA
CCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
A
C
>Mature Secondary Structure
MQSALYVNSRFLTQPLSGVQRFATEITSAIGRVWSANDVSRPILLTPAAALIADGPGDLE
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHCCCCCHHH
RQFVGRRQGQIWEQIDLPRRARDGVLLNLGNTAPIMGRRQLVVLHDAGIFSQPDAYSWRF
HHHHHHHCCCHHHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHH
RLWYRVLHNLLLRTRSRLVTVSEFSRGELARHLGVVAERFAVIPEGADHISRLAADHAVL
HHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ARHGLATGRYVLVVGNLAPHKNLASLGVLARMLAARDIALVITGALNRSVFNGQDGITLP
HHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEHHHCCCEECCCCCEECC
APAHYIGRVSDTELCALYQNAACFVFPSRYEGFGLPAVEAMACGCPVVASSIPALREVCA
CCHHHHCCCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCCHHHHHCCHHHHHHHH
DAALYAHPDDPVAIASTVARVIDTPGLAQDMRMKGMARAAGFTWDKAARALLDLVHDREA
CCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]