| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is exoY [H]
Identifier: 162148275
GI number: 162148275
Start: 2583755
End: 2585257
Strand: Direct
Name: exoY [H]
Synonym: GDI_2492
Alternate gene names: 162148275
Gene position: 2583755-2585257 (Clockwise)
Preceding gene: 162148268
Following gene: 162148276
Centisome position: 65.51
GC content: 63.61
Gene sequence:
>1503_bases ATGGATACACAGGTTTCCAGCATCATTATTGGCGTTGCTGACGCGGCCGGTCAGGTGCCGGAAAGCAATATCCTTACCCT GGCCAGCGGTCCGACGCCCGCGCTTCCGTCGGATCTTCGCCGTTTTCGTTACTTTTCCGCAACTGCCCTGATGATGGGCG ATGCGCTGGCGTTCGCGCTTGCGCTCGCGACTGTTCACCTGTCCTCCGCCTTTTCGGCATCGACGTCGCTGCTGGTCCCC GACGGGCACCTGGCGACGGAAAAGAGCCTGTGGCTTTCGATCTTCATGATGGCGGGTCTGGTCTATTATTTTTCGACCAA GGGCCATTATCGCGACCGGCTGCCGTTCTGGAGCGAGGTCCCGCAGATCATCGCGATCTCGGTGGCCGCCATGACCGTGG CGGCCGGGTTCGGCGTCCTGCTCGGCTCGCTGCATGATGCCGCGCGGATGACGGAGCAATGGGTCGTCTTTGCCGCGCTG GCGATTTCCCTGCGCCAGATCGCCAAGCACACCTTGCATCATTTCGGGCTGTGGCAGCTTCCGGTTCTTCTGGTCGGCGA CACCGAAACCTGCAACAAGACCATCGAGGCATTTTCCAGCGAGCGTCTGCCCGGTCTGCGGGCGGTCGACTGCATTTCCT CGGAATCCCTGCTGCGCGTGGCGCCTTCGCATCTGACCCGGGTACTTCTGACGCGGTACGGCGCGGTACGACTGGTCCTG GCCATCGATGTCAACGAAGCCGCCGGCCGCGCGGTCATTTCACGCGTGACGCGGGGCCGGGTGCCGTTTTCGCTGGTCCC GCAGATGGCCGACATACCCATCGACCATAGCCGTCTGTCCTATTTCAGCTTCGACACCATGATGCTGACATTTCGCAGCA AGCTGGACCTGCCGTTCCACCGCGCGACCAAAATCGCGTTCGACGTGGCGGTGGCGTCCGCGCTGCTGTTCCTGGCACTG CCCGTGTTCCTTATACTCTATGGGCTGGTGCGGATGGATGGCGGCCCGGCGACCTTCGGACATCTGCGCGTCGGACGAAA TGGACAGCCCTTCCGCTGCCTGAAGTTCCGCACCATGGTGCCGAACGCGGAGGAGGTCCTGGCCGACCTGCTGGCCCGGG ACGCCCATGCCGCCGCCGAATGGGCCGCGACGCGCAAGCTGACGAACGATCCGCGGATCACCGCGATCGGCCGCCTGCTG CGCCAGACCAGCCTGGATGAACTGCCGCAGCTTCTGAATGTGCTGCGCCTGGACATGAGCCTGGTCGGACCACGGCCGAT CGTGACGGCCGAAGCAGATCATTACGGTGACGACATGGAGTACTACCATGCGATCCGCCCGGGCATCACCGGCCTGTGGC AGGTCAGCGGACGGAGCGACACGTCGTATCCGCGACGGGTGCAACTGGACAACTGGTATGTCCGTAACTGGAGCCTGTGG AACGACGTCGTGATCCTTGCCAGGACGGTGCCGGCCGTCCTGTTCCGGAACGGCGCCCGATAG
Upstream 100 bases:
>100_bases AACATAAATTGCTTATTTTTATATCGTATATAATCGCTTTTTTTAAAATTATCGACACCTGATTTTAATTATTTATTTTT ATTTTAGCCGGGGATGTGTT
Downstream 100 bases:
>100_bases AGCCGCACAGTCCGAAAGCCCGACCGCCGCAAGGCCGTTTCGATGAAATCTCCCTACGCCCCCATGCGAGAGATCGTGCG ATGAACCAGCTTCAATTATC
Product: exopolysaccharide production protein exoY
Products: NA
Alternate protein names: Galactosyl-P-P-undecaprenol synthase [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MDTQVSSIIIGVADAAGQVPESNILTLASGPTPALPSDLRRFRYFSATALMMGDALAFALALATVHLSSAFSASTSLLVP DGHLATEKSLWLSIFMMAGLVYYFSTKGHYRDRLPFWSEVPQIIAISVAAMTVAAGFGVLLGSLHDAARMTEQWVVFAAL AISLRQIAKHTLHHFGLWQLPVLLVGDTETCNKTIEAFSSERLPGLRAVDCISSESLLRVAPSHLTRVLLTRYGAVRLVL AIDVNEAAGRAVISRVTRGRVPFSLVPQMADIPIDHSRLSYFSFDTMMLTFRSKLDLPFHRATKIAFDVAVASALLFLAL PVFLILYGLVRMDGGPATFGHLRVGRNGQPFRCLKFRTMVPNAEEVLADLLARDAHAAAEWAATRKLTNDPRITAIGRLL RQTSLDELPQLLNVLRLDMSLVGPRPIVTAEADHYGDDMEYYHAIRPGITGLWQVSGRSDTSYPRRVQLDNWYVRNWSLW NDVVILARTVPAVLFRNGAR
Sequences:
>Translated_500_residues MDTQVSSIIIGVADAAGQVPESNILTLASGPTPALPSDLRRFRYFSATALMMGDALAFALALATVHLSSAFSASTSLLVP DGHLATEKSLWLSIFMMAGLVYYFSTKGHYRDRLPFWSEVPQIIAISVAAMTVAAGFGVLLGSLHDAARMTEQWVVFAAL AISLRQIAKHTLHHFGLWQLPVLLVGDTETCNKTIEAFSSERLPGLRAVDCISSESLLRVAPSHLTRVLLTRYGAVRLVL AIDVNEAAGRAVISRVTRGRVPFSLVPQMADIPIDHSRLSYFSFDTMMLTFRSKLDLPFHRATKIAFDVAVASALLFLAL PVFLILYGLVRMDGGPATFGHLRVGRNGQPFRCLKFRTMVPNAEEVLADLLARDAHAAAEWAATRKLTNDPRITAIGRLL RQTSLDELPQLLNVLRLDMSLVGPRPIVTAEADHYGDDMEYYHAIRPGITGLWQVSGRSDTSYPRRVQLDNWYVRNWSLW NDVVILARTVPAVLFRNGAR >Mature_500_residues MDTQVSSIIIGVADAAGQVPESNILTLASGPTPALPSDLRRFRYFSATALMMGDALAFALALATVHLSSAFSASTSLLVP DGHLATEKSLWLSIFMMAGLVYYFSTKGHYRDRLPFWSEVPQIIAISVAAMTVAAGFGVLLGSLHDAARMTEQWVVFAAL AISLRQIAKHTLHHFGLWQLPVLLVGDTETCNKTIEAFSSERLPGLRAVDCISSESLLRVAPSHLTRVLLTRYGAVRLVL AIDVNEAAGRAVISRVTRGRVPFSLVPQMADIPIDHSRLSYFSFDTMMLTFRSKLDLPFHRATKIAFDVAVASALLFLAL PVFLILYGLVRMDGGPATFGHLRVGRNGQPFRCLKFRTMVPNAEEVLADLLARDAHAAAEWAATRKLTNDPRITAIGRLL RQTSLDELPQLLNVLRLDMSLVGPRPIVTAEADHYGDDMEYYHAIRPGITGLWQVSGRSDTSYPRRVQLDNWYVRNWSLW NDVVILARTVPAVLFRNGAR
Specific function: Is responsible for transferring galactose-1-phosphate to the lipid precursor undecaprenol phosphate in the first steps of O-polysaccharide biosynthesis [H]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=235, Percent_Identity=35.3191489361702, Blast_Score=129, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 - InterPro: IPR017472 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: =2.7.8.6 [H]
Molecular weight: Translated: 55107; Mature: 55107
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTQVSSIIIGVADAAGQVPESNILTLASGPTPALPSDLRRFRYFSATALMMGDALAFAL CCCCCEEEEEEECHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALATVHLSSAFSASTSLLVPDGHLATEKSLWLSIFMMAGLVYYFSTKGHYRDRLPFWSEV HHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHC PQIIAISVAAMTVAAGFGVLLGSLHDAARMTEQWVVFAALAISLRQIAKHTLHHFGLWQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHC PVLLVGDTETCNKTIEAFSSERLPGLRAVDCISSESLLRVAPSHLTRVLLTRYGAVRLVL CEEEECCCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEE AIDVNEAAGRAVISRVTRGRVPFSLVPQMADIPIDHSRLSYFSFDTMMLTFRSKLDLPFH EEECCHHHHHHHHHHHHCCCCCHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH RATKIAFDVAVASALLFLALPVFLILYGLVRMDGGPATFGHLRVGRNGQPFRCLKFRTMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEECC PNAEEVLADLLARDAHAAAEWAATRKLTNDPRITAIGRLLRQTSLDELPQLLNVLRLDMS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LVGPRPIVTAEADHYGDDMEYYHAIRPGITGLWQVSGRSDTSYPRRVQLDNWYVRNWSLW HCCCCCEEEECCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCEEEECCCHH NDVVILARTVPAVLFRNGAR HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDTQVSSIIIGVADAAGQVPESNILTLASGPTPALPSDLRRFRYFSATALMMGDALAFAL CCCCCEEEEEEECHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALATVHLSSAFSASTSLLVPDGHLATEKSLWLSIFMMAGLVYYFSTKGHYRDRLPFWSEV HHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHC PQIIAISVAAMTVAAGFGVLLGSLHDAARMTEQWVVFAALAISLRQIAKHTLHHFGLWQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHC PVLLVGDTETCNKTIEAFSSERLPGLRAVDCISSESLLRVAPSHLTRVLLTRYGAVRLVL CEEEECCCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEE AIDVNEAAGRAVISRVTRGRVPFSLVPQMADIPIDHSRLSYFSFDTMMLTFRSKLDLPFH EEECCHHHHHHHHHHHHCCCCCHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH RATKIAFDVAVASALLFLALPVFLILYGLVRMDGGPATFGHLRVGRNGQPFRCLKFRTMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEECC PNAEEVLADLLARDAHAAAEWAATRKLTNDPRITAIGRLLRQTSLDELPQLLNVLRLDMS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LVGPRPIVTAEADHYGDDMEYYHAIRPGITGLWQVSGRSDTSYPRRVQLDNWYVRNWSLW HCCCCCEEEECCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCEEEECCCHH NDVVILARTVPAVLFRNGAR HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1710759; 11677609 [H]