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The map label for this gene is 162148237

Identifier: 162148237

GI number: 162148237

Start: 2544766

End: 2545266

Strand: Reverse

Name: 162148237

Synonym: GDI_2454

Alternate gene names: NA

Gene position: 2545266-2544766 (Counterclockwise)

Preceding gene: 162148238

Following gene: 162148236

Centisome position: 64.53

GC content: 66.47

Gene sequence:

>501_bases
ATGGTCAAGACAATGGCGGGCGCCGCCGCGCTGGCGGCTGTCCTGGGCGTGGGGATGGCATCCCCGACGCGGGCGGCGGA
TATCGTGCGCTACCCCGCCGATCATTTTCCGATCGCCACGGCGATCGAGGTCCCCCCCGGCGCCAGCACGATCTATCTGA
GCGGCACGGGCGCGCAGCCGGTGAACAAGTCGGCGAAGCCGATGACGCTGGCCGCCTACGGTGACACCGAGACCCAGGTC
CGTGGCGCGCTGACGCAGATTCAGGGCCAACTGGCCAAGCTGAAGCTGACGATGGGCGACGTGGTGCAGATGCACATCTA
CATGGTCGCCGATCCGAAGCTGGGCAAGATCGACTTCCCGGGAATGATGAAGGCCTATACCGAGTTTTTCGGAACGAAGG
CGCAGCCGAACCTGCCGACGCGCTCGGCGTTCGAGGTCGCGCACCTGGCCAACCCCGGCTGGCTGGTCGAAATCGAGGTC
ACGGCCGTTCGCGCGCACTGA

Upstream 100 bases:

>100_bases
GCAGCCATTTCGGCAATCATTACACCGACATCGTGAAGCCGGAAGACGTTGCCGGCCAGCGCCCGGCCATTAATCCCGAA
CAGGAATGACAGACATGACG

Downstream 100 bases:

>100_bases
TCGCGGTTCCGATATCGTCACGAAATCGTCACAATTGGCCGGCATCGTGGTCTTGCGATGTCCGGCTGTTTCGATCCGGG
GCGGCGGAAAGCCGCCACGG

Product: endoribonuclease protein

Products: NA

Alternate protein names: TdcF Protein; Translation Initiation Inhibitor; Endoribonuclease; Endoribonuclease L-PSP Family; Endonuclease L-PSP Endoribonuclease; Endoribonuclease L-Psp; Endoribonuclease L-PSP Family Protein; Endoribonuclease L-PSP Superfamily

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MVKTMAGAAALAAVLGVGMASPTRAADIVRYPADHFPIATAIEVPPGASTIYLSGTGAQPVNKSAKPMTLAAYGDTETQV
RGALTQIQGQLAKLKLTMGDVVQMHIYMVADPKLGKIDFPGMMKAYTEFFGTKAQPNLPTRSAFEVAHLANPGWLVEIEV
TAVRAH

Sequences:

>Translated_166_residues
MVKTMAGAAALAAVLGVGMASPTRAADIVRYPADHFPIATAIEVPPGASTIYLSGTGAQPVNKSAKPMTLAAYGDTETQV
RGALTQIQGQLAKLKLTMGDVVQMHIYMVADPKLGKIDFPGMMKAYTEFFGTKAQPNLPTRSAFEVAHLANPGWLVEIEV
TAVRAH
>Mature_166_residues
MVKTMAGAAALAAVLGVGMASPTRAADIVRYPADHFPIATAIEVPPGASTIYLSGTGAQPVNKSAKPMTLAAYGDTETQV
RGALTQIQGQLAKLKLTMGDVVQMHIYMVADPKLGKIDFPGMMKAYTEFFGTKAQPNLPTRSAFEVAHLANPGWLVEIEV
TAVRAH

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17510; Mature: 17510

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKTMAGAAALAAVLGVGMASPTRAADIVRYPADHFPIATAIEVPPGASTIYLSGTGAQP
CCCCHHHHHHHHHHHHCCCCCCCCCHHHEECCCCCCCEEEEEECCCCCCEEEEECCCCCC
VNKSAKPMTLAAYGDTETQVRGALTQIQGQLAKLKLTMGDVVQMHIYMVADPKLGKIDFP
CCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEEEECCCCCCCCCC
GMMKAYTEFFGTKAQPNLPTRSAFEVAHLANPGWLVEIEVTAVRAH
HHHHHHHHHHCCCCCCCCCCCHHHHHEEECCCCEEEEEEEEEEECC
>Mature Secondary Structure
MVKTMAGAAALAAVLGVGMASPTRAADIVRYPADHFPIATAIEVPPGASTIYLSGTGAQP
CCCCHHHHHHHHHHHHCCCCCCCCCHHHEECCCCCCCEEEEEECCCCCCEEEEECCCCCC
VNKSAKPMTLAAYGDTETQVRGALTQIQGQLAKLKLTMGDVVQMHIYMVADPKLGKIDFP
CCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEEEECCCCCCCCCC
GMMKAYTEFFGTKAQPNLPTRSAFEVAHLANPGWLVEIEVTAVRAH
HHHHHHHHHHCCCCCCCCCCCHHHHHEEECCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA