BacMap

Definition	Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession	NC_010125
Length	3,944,163

Click here to switch to the map view.

The map label for this gene is fbpC [H]

Identifier: 162148235

GI number: 162148235

Start: 2543621

End: 2544280

Strand: Reverse

Name: fbpC [H]

Synonym: GDI_2452

Alternate gene names: 162148235

Gene position: 2544280-2543621 (Counterclockwise)

Preceding gene: 162148236

Following gene: 162148234

Centisome position: 64.51

GC content: 69.55

Gene sequence:

>660_bases
GTGTTTGAACCGTCTTCTTTCCCGCCATGTGGCGGTACCCTCCCTCGTGGGATCGCCCCACGCGGGTTGTCGGTGCGCGG
GTTATGTAATCCGCATGCGGGGCCGGTCGATTTCGATGTGCCGGGCGGTGCCTGCCTGGTCCTGACCGGCATGTCGGGCG
CCGGCAAGACGGTGCTGTTGCGCATGATCGCAGACCTGGACCCCCATCAGGGCGACGTCGCGCTGGACGGCAGGCTGTGC
CGTGCGATGCCGGCCCATCTGTGGCGCCGGCAGGTCGTATATTGTCCGGCCGAACCGGGATGGTGGTCGGATTCGGTTCT
GGATCACCTGCCCGACGATGCGCGCACGCGCGACCTGCTGGCGCGGGCCGGGCTGCGCGACGGCCTGCTGCGCGATCCGC
TGCACCGCCTGTCCACCGGCGAGCGGCAGCGCCTGGCCCTGGTGCGCGGCCTGCGCCAGGACCCGCGCGTGCTGCTGCTG
GACGAACCCTGTTCGGCGCTGGACGAGGCGACGACGCGCAAGGTGGAAACCATCCTGCACGCCGAGAAGGCCAGGGGGGT
GGCGATCGTCCTGATATCGCACGATCCGCGACAGGCCGACCGGATGGCCGACCTTCGGTGCCATATGGAGCATGGCCGCT
TCGCCCGGGTGGGTTCGTGA

Upstream 100 bases:

>100_bases
GATCCGCTCCTGGGCAATCGACTGAATCCGGCTTCCAGACGGCCTCTTTTCGTCTATCTGGTATTCTGGTCCGTCCAGAA
AACAGGTCGATTGCATTACA

Downstream 100 bases:

>100_bases
CGCCGATCCTGCTGACGACCGGGGACCTGGTCCTGGCGGGTGGCCTGATCGCCGGCTGCATCGTGGTGTCGGTCATGCTG
TCGCTGGGTATTCATCGCAC

Product: ferric cations import ATP-binding protein fbpC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MFEPSSFPPCGGTLPRGIAPRGLSVRGLCNPHAGPVDFDVPGGACLVLTGMSGAGKTVLLRMIADLDPHQGDVALDGRLC
RAMPAHLWRRQVVYCPAEPGWWSDSVLDHLPDDARTRDLLARAGLRDGLLRDPLHRLSTGERQRLALVRGLRQDPRVLLL
DEPCSALDEATTRKVETILHAEKARGVAIVLISHDPRQADRMADLRCHMEHGRFARVGS

Sequences:

>Translated_219_residues
MFEPSSFPPCGGTLPRGIAPRGLSVRGLCNPHAGPVDFDVPGGACLVLTGMSGAGKTVLLRMIADLDPHQGDVALDGRLC
RAMPAHLWRRQVVYCPAEPGWWSDSVLDHLPDDARTRDLLARAGLRDGLLRDPLHRLSTGERQRLALVRGLRQDPRVLLL
DEPCSALDEATTRKVETILHAEKARGVAIVLISHDPRQADRMADLRCHMEHGRFARVGS
>Mature_219_residues
MFEPSSFPPCGGTLPRGIAPRGLSVRGLCNPHAGPVDFDVPGGACLVLTGMSGAGKTVLLRMIADLDPHQGDVALDGRLC
RAMPAHLWRRQVVYCPAEPGWWSDSVLDHLPDDARTRDLLARAGLRDGLLRDPLHRLSTGERQRLALVRGLRQDPRVLLL
DEPCSALDEATTRKVETILHAEKARGVAIVLISHDPRQADRMADLRCHMEHGRFARVGS

Specific function: Unknown

COG id: COG4619

COG function: function code R; ABC-type uncharacterized transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI21536378, Length=172, Percent_Identity=29.6511627906977, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI42490749, Length=168, Percent_Identity=31.547619047619, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI148612844, Length=243, Percent_Identity=27.5720164609054, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI255708477, Length=243, Percent_Identity=27.5720164609054, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI9961250, Length=202, Percent_Identity=27.7227722772277, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI4505771, Length=202, Percent_Identity=27.7227722772277, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI9961252, Length=202, Percent_Identity=27.7227722772277, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI27881501, Length=203, Percent_Identity=25.1231527093596, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI30795238, Length=203, Percent_Identity=25.1231527093596, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI42741659, Length=189, Percent_Identity=28.042328042328, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI27436953, Length=200, Percent_Identity=31.5, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI150417984, Length=201, Percent_Identity=31.3432835820896, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1786698, Length=197, Percent_Identity=33.502538071066, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1788450, Length=199, Percent_Identity=31.6582914572864, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1790162, Length=231, Percent_Identity=29.8701298701299, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI87081791, Length=215, Percent_Identity=30.2325581395349, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1787089, Length=204, Percent_Identity=31.3725490196078, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786398, Length=197, Percent_Identity=34.010152284264, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787029, Length=219, Percent_Identity=27.3972602739726, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1787712, Length=199, Percent_Identity=29.6482412060301, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787792, Length=194, Percent_Identity=30.4123711340206, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788225, Length=226, Percent_Identity=27.8761061946903, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787105, Length=192, Percent_Identity=30.2083333333333, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789962, Length=205, Percent_Identity=29.7560975609756, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1786345, Length=221, Percent_Identity=27.1493212669683, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1790467, Length=207, Percent_Identity=29.4685990338164, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786253, Length=207, Percent_Identity=29.951690821256, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1787113, Length=207, Percent_Identity=29.4685990338164, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI87082267, Length=204, Percent_Identity=28.921568627451, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787758, Length=192, Percent_Identity=28.6458333333333, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789873, Length=200, Percent_Identity=31.5, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787112, Length=199, Percent_Identity=26.6331658291457, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI145693107, Length=205, Percent_Identity=29.7560975609756, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1787164, Length=193, Percent_Identity=32.6424870466321, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788002, Length=202, Percent_Identity=32.1782178217822, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1789593, Length=197, Percent_Identity=27.4111675126904, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17567265, Length=187, Percent_Identity=29.9465240641711, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI193208177, Length=204, Percent_Identity=25.9803921568627, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI115535101, Length=189, Percent_Identity=30.6878306878307, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI193202349, Length=187, Percent_Identity=27.807486631016, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17567269, Length=183, Percent_Identity=30.0546448087432, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115533592, Length=175, Percent_Identity=29.1428571428571, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17541710, Length=200, Percent_Identity=28, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25146777, Length=206, Percent_Identity=26.6990291262136, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24653245, Length=173, Percent_Identity=28.3236994219653, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24659289, Length=227, Percent_Identity=24.6696035242291, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI281363262, Length=173, Percent_Identity=28.3236994219653, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24641565, Length=194, Percent_Identity=29.3814432989691, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI85726357, Length=181, Percent_Identity=28.7292817679558, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21357907, Length=176, Percent_Identity=26.1363636363636, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 23961; Mature: 23961

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEPSSFPPCGGTLPRGIAPRGLSVRGLCNPHAGPVDFDVPGGACLVLTGMSGAGKTVLL
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCEEEEEECCCCCCHHHHH
RMIADLDPHQGDVALDGRLCRAMPAHLWRRQVVYCPAEPGWWSDSVLDHLPDDARTRDLL
HHHHHCCCCCCCEEECCHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHCCCCHHHHHHH
ARAGLRDGLLRDPLHRLSTGERQRLALVRGLRQDPRVLLLDEPCSALDEATTRKVETILH
HHHCHHCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH
AEKARGVAIVLISHDPRQADRMADLRCHMEHGRFARVGS
HHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MFEPSSFPPCGGTLPRGIAPRGLSVRGLCNPHAGPVDFDVPGGACLVLTGMSGAGKTVLL
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCEEEEEECCCCCCHHHHH
RMIADLDPHQGDVALDGRLCRAMPAHLWRRQVVYCPAEPGWWSDSVLDHLPDDARTRDLL
HHHHHCCCCCCCEEECCHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHCCCCHHHHHHH
ARAGLRDGLLRDPLHRLSTGERQRLALVRGLRQDPRVLLLDEPCSALDEATTRKVETILH
HHHCHHCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH
AEKARGVAIVLISHDPRQADRMADLRCHMEHGRFARVGS
HHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]