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The map label for this gene is holA

Identifier: 162148178

GI number: 162148178

Start: 2473123

End: 2474136

Strand: Direct

Name: holA

Synonym: GDI_2395

Alternate gene names: NA

Gene position: 2473123-2474136 (Clockwise)

Preceding gene: 162148177

Following gene: 162148179

Centisome position: 62.7

GC content: 74.46

Gene sequence:

>1014_bases
GTGAAGATCGACGCGCGCTCGGTCGCCCGCATCCTGCGTGAACCCGGGGCGCTGCGCGTCATCCTGCTGCACGGCGACGA
TTCCGGCCTGATCCGCGAACGCGCCCGTCTGGCCGCGACCGCCATCGCCCCGAACCTGGACGACCCGTTCCGCGTCGCCG
TGCTGGACCGCGACGCGGCGGACCGGCTGGACGAGGAGATCTTCGCGCTATCCCTTGCCGGCGGCCGCCGCGTCGTCTGG
GTCCGCGACGGCGGGGACAGCCTGACGGCCCCGCTGAAGGCCAGCCTGGCCCGGCCATCGGATACGCTGGTGATCGTCGA
GGCCCCGGGCCTGGCCTCGCGCGCGCGCCTGCGCGCGCTGGCCGAGGCGCAGGCCGATTGCGCCGCCATCGCCTGCTACC
CCGAGGAAGGCCGCGCGCTGGAAGCCTCGATCCGCCAGATGCTGGCGGAAGAGGACATTCGCATCGATCCCGACGCCCTG
TCCTGGTTCGCCGGCCTGCTGGGACCGAACCGGGCCGCGACACGAGGCGAGGTCGAGAAGCTCGCCCTCTATGCCGGGCG
GGGCGGCCAGCTCTCGCTGGACGACGTGCGGATGTGCATCGGGGACGCGGCGGGCGTGTCGCTGGAAGACGCGGCCTTCG
CCGCGACAGCGGGCGACCGGGCCGGCGCGGATATCGCGATCGAGCGCGCGCTGGCCGAGGGCACCAGCCCGATCGCGGTC
GCCCGGTCGCTGCTGTCGCACCTGCACCGGCTGCGGCGCGCGCGAATCGCCATGGATGGCGGCCAGAGCCGCGCCGACGC
CATGCGCGGCCTGCGCCCGCCCGTCTTCTTCAAGCGGACCGATGCCTTCGGCCAGGCCCTTTCCCTGTGGACGGCCGCCC
GCCTGATGGAGGCCGCCGAACAGACCCAGCGCCTGGAACTGGAGTGCAAGCAGACCGGCGCCCCGGACCTCGCGCTCTGC
CGCCGCCATATCGCGCGCCTGGCCGCGACCGCGATGGCGGGGCGCCGCCGGTGA

Upstream 100 bases:

>100_bases
TCGGCGAGGACGGCATGCCGGGCATGGCCATCGGACGTTCGCTGCCCAACCCGTCCGGCGCGTCGGAGACCGAGCCCGCC
AACGGGACCCTGATCAACCA

Downstream 100 bases:

>100_bases
CCTGCGCGCTTGCCCGAACCGTCCCGCTCGGCTAGAAGCGTCGTGTGTGTCCGCGTAGCTCAGCAGGATAGAGCACAGGA
TTCCTGGTTTTCAAATTGGG

Product: DNA polymerase III subunit delta

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Delta Subunit

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKIDARSVARILREPGALRVILLHGDDSGLIRERARLAATAIAPNLDDPFRVAVLDRDAADRLDEEIFALSLAGGRRVVW
VRDGGDSLTAPLKASLARPSDTLVIVEAPGLASRARLRALAEAQADCAAIACYPEEGRALEASIRQMLAEEDIRIDPDAL
SWFAGLLGPNRAATRGEVEKLALYAGRGGQLSLDDVRMCIGDAAGVSLEDAAFAATAGDRAGADIAIERALAEGTSPIAV
ARSLLSHLHRLRRARIAMDGGQSRADAMRGLRPPVFFKRTDAFGQALSLWTAARLMEAAEQTQRLELECKQTGAPDLALC
RRHIARLAATAMAGRRR

Sequences:

>Translated_337_residues
MKIDARSVARILREPGALRVILLHGDDSGLIRERARLAATAIAPNLDDPFRVAVLDRDAADRLDEEIFALSLAGGRRVVW
VRDGGDSLTAPLKASLARPSDTLVIVEAPGLASRARLRALAEAQADCAAIACYPEEGRALEASIRQMLAEEDIRIDPDAL
SWFAGLLGPNRAATRGEVEKLALYAGRGGQLSLDDVRMCIGDAAGVSLEDAAFAATAGDRAGADIAIERALAEGTSPIAV
ARSLLSHLHRLRRARIAMDGGQSRADAMRGLRPPVFFKRTDAFGQALSLWTAARLMEAAEQTQRLELECKQTGAPDLALC
RRHIARLAATAMAGRRR
>Mature_337_residues
MKIDARSVARILREPGALRVILLHGDDSGLIRERARLAATAIAPNLDDPFRVAVLDRDAADRLDEEIFALSLAGGRRVVW
VRDGGDSLTAPLKASLARPSDTLVIVEAPGLASRARLRALAEAQADCAAIACYPEEGRALEASIRQMLAEEDIRIDPDAL
SWFAGLLGPNRAATRGEVEKLALYAGRGGQLSLDDVRMCIGDAAGVSLEDAAFAATAGDRAGADIAIERALAEGTSPIAV
ARSLLSHLHRLRRARIAMDGGQSRADAMRGLRPPVFFKRTDAFGQALSLWTAARLMEAAEQTQRLELECKQTGAPDLALC
RRHIARLAATAMAGRRR

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 36108; Mature: 36108

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDARSVARILREPGALRVILLHGDDSGLIRERARLAATAIAPNLDDPFRVAVLDRDAA
CCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH
DRLDEEIFALSLAGGRRVVWVRDGGDSLTAPLKASLARPSDTLVIVEAPGLASRARLRAL
HHHHHHHEEEEECCCCEEEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHH
AEAQADCAAIACYPEEGRALEASIRQMLAEEDIRIDPDALSWFAGLLGPNRAATRGEVEK
HHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHH
LALYAGRGGQLSLDDVRMCIGDAAGVSLEDAAFAATAGDRAGADIAIERALAEGTSPIAV
HEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHEECCCCCCCCHHHHHHHHHCCCCHHHH
ARSLLSHLHRLRRARIAMDGGQSRADAMRGLRPPVFFKRTDAFGQALSLWTAARLMEAAE
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH
QTQRLELECKQTGAPDLALCRRHIARLAATAMAGRRR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIDARSVARILREPGALRVILLHGDDSGLIRERARLAATAIAPNLDDPFRVAVLDRDAA
CCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH
DRLDEEIFALSLAGGRRVVWVRDGGDSLTAPLKASLARPSDTLVIVEAPGLASRARLRAL
HHHHHHHEEEEECCCCEEEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHH
AEAQADCAAIACYPEEGRALEASIRQMLAEEDIRIDPDALSWFAGLLGPNRAATRGEVEK
HHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHH
LALYAGRGGQLSLDDVRMCIGDAAGVSLEDAAFAATAGDRAGADIAIERALAEGTSPIAV
HEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHEECCCCCCCCHHHHHHHHHCCCCHHHH
ARSLLSHLHRLRRARIAMDGGQSRADAMRGLRPPVFFKRTDAFGQALSLWTAARLMEAAE
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH
QTQRLELECKQTGAPDLALCRRHIARLAATAMAGRRR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA