| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is leuS [H]
Identifier: 162148176
GI number: 162148176
Start: 2469763
End: 2472393
Strand: Direct
Name: leuS [H]
Synonym: GDI_2393
Alternate gene names: 162148176
Gene position: 2469763-2472393 (Clockwise)
Preceding gene: 162148175
Following gene: 162148177
Centisome position: 62.62
GC content: 69.29
Gene sequence:
>2631_bases GTGCCCCGGACCATGATCATGACCGAGAATTCCCCCGCCCCCTATGATTTCCGCACGGCCGAGCCGCACTGGCAGGCCGA ATGGGACCGGGCGGGGGCTTTCGACGTGCCCGACGTGCCCCCCGCCGACCGCCCGAAATATTACGTGCTGGAGATGTTCC CCTACCCGTCGGGGCAGCTTCATATGGGCCATGTCCGCAACTATACGCTGGGCGACGTGGTGGCTCGGTACAAGCGGGCC CGCGGCCATTCGGTGCTGCACCCGATGGGCTGGACGCGTTCGGCCTGCCGGCGGAAAACGCGGCGCGCGAACGCGGCGTG CACCCGCAGGCCTGGACCTGGACAAATCGCCGCCATGCGCGCGACGCTGAAGCGCCTGGGCTTCTCGTTCAACTGGGACC GCGAGATCGCGACCTGCCTGCCGGACTATTACGGCAAGCAGCAGAAGCTGTTCCTGGACATGCTGGGGGCCGGCCTGGTC GAACGCCGCGAAAGCTGGGTGAACTGGGACCCGGTGGACCATACGGTGCTGGCGAACGAACAGGTGGTGGACGGCCGCGG CTGGCGGTCCGGCGCGCTGATCGAAAAGAAGCAGCTTTCGCAGTGGTTCCTGCGCATCACCAAATTCGCGCCCGACCTGC TGGACGGGCTGTCGCACCTGCCCCGCTGGCCCGAGCGGGTACGGACGATGCAGGAACGCTGGATCGGCCGGTCGGTCGGC GCGCGGGTGCGTTTTGCCCTGCATGCCCCGCCCGAGGGTTTCGACACCGACCTCGATTCGGTCGAGGTCTTCACCACGCG GCCGGATACGCTGTTCGGCATGGCCTTCCTCGCCGTCGCGGCGGACCACCCGCTGGCGGCCAAGGTGGCGCAGGACAATC CCGCCGCCGCCGCGTTCATCGCCGAATGCCGCCGCCTGGGCACGTCCGAGGAAGCGATCGAAACGGCGGAAAAGCGCGGT TTCGATACCGGGTTGCGGGTATCGCATCCCTTCCTGCCGGATCGCAGCTTCCCGGTCTGGATCGCCAATTTCGTGCTGAT GGATTACGGCACGGGCGCGATCTTCGGCTGCCCCTGCGGTGACCAGCGCGACCTGGATTTCGCCAATGCCTATCACCTGC CGTTCCAGCCGGTGATCCTGCCGCCCGGCGAGGACGCCACGACCTTCACCATTACCGGCAAGGCGTGGGACGGTGACGGC ACGCTGTTCAATTCCGGCTTCCTCGACGGGCTGGATTCGGCCACCGCGAAGGCCGAGGCGATCACCCGGCTGGAAGGCAT GGGCGTCGGCCGGGGCGTGGTGAACTGGCGCCTGCGCGACTGGGGCATCTCGCGCCAGCGGTACTGGGGCTGCCCGATCC CGGTGATCCATTGCGCGTCCTGCGGCGCGGTGCCGGTGCCCGACGACCGGTTGCCCGTGGTGCTGCCCGAGGACGTGACG TTCGACCGTCCCGGCAATCCGCTGGACCATCATCCGACCTGGAAGCACGTCGCCTGCCCGCGTTGCGGCGCCGCCGCCAC GCGTGAAACCGATACGTTCGACACGTTCGTGGACAGTTCGTGGTACTTCGCCCGCTTCACCGCGCCGCACGCGGCAGCGC CGACCGTGCGCCCGGCGGCGGACGGCTGGCTGCCGGTCGACCAGTATATCGGCGGCATCGAACACGCGATCCTGCATCTG CTCTATGCCCGCTTCTTCACCCGGGCGATGCGCGAAACCGGGCATGTCGGGCTGGACGAGCCGTTCGACGGCCTGTTCAC CCAGGGCATGGTGAACCACGAGAGCTATCGCGACGCGGCGGGCCAGTGGCTGTATCCCGAGGAAGTCGACCGCCGTGCCG ATGGCGCGGTCAGCCGCGATACCGGCGCCCCGGTGACGATCGGCCGCGTCGAGAAAATGTCCAAGTCCAAGCGCAACACC GTAGCGCCGGTCGCGATCATCGAACGGTTCGGCGCCGATACCGCACGCTGGTTCGTGCTGTCGGACAGCCCGCCGGAACG CGACATGGAATGGACCGAGGCCGGCGTGGCCGGCGCCGCGCGCTTCCTGCAGCGGCTGTACCGGACCGTGCGCACCGTCG CCGAATCCGTGCAGCCCGTGGCGGAAGCCGCCGCCACGCCCACGGAAGCCGCCGATACGCTGCGCCGGGCCACCCACCGC GCCATCGCCGCCGTGACCGACGCGCTGGAAAGCTTCGCGATCAACGTCGCGGTGGCCCGCCTGCACGAACTGACGACCGC GCTGGCGGAGTCCGAACGCGCGTCAGGCGACGACGGCATGGATTTCGCCCGGCGCGAGGCCGCGCTGACCCTGTGCCTGC TGGCCGCCCCGATGGTGCCGCACCAGGCCGAGGACATGCTGGCCCTGCTGGAGCCCGGACAATCCCCCGCCGTCAGCCGC CCGTGGCCGGTCGCCGAGCCCGAACTGCTGGTCGCCCGCCAGGTCACGATCGCGGTTCAGATCATGGGCAAGCTGCGCGG CACGGTCGCGGCCCCGCCCGACGCCCCGGCGGATGCGGTCATCGCCCTGGCGGAAACGGAGACCAACGTCGCCCGGCTGC TGGAGGGCAAGCGCATCGTCAAGCGCATCCACGTGCCCAACCGCATCGTCAATTTCGTGATCGCGGGCTGA
Upstream 100 bases:
>100_bases CAGCTTCGCGCCGACAGCGGCGGCCACTGACCCGCGCCGCCCCGGCGCGGCCCGCTTCCCTGCATCGATCGATCAGGGCC CCCATAGACGATCGGGCCAC
Downstream 100 bases:
>100_bases CCCGATGACCGCCCCGCCGCGCCGCGCCGTCCTTGGGGCCCTGTTGCTGGCCGGGTCGCTGTCCCTGGGCGGATGCGGCT TCCAGCCCCTCTATGGCGGC
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 876; Mature: 875
Protein sequence:
>876_residues MPRTMIMTENSPAPYDFRTAEPHWQAEWDRAGAFDVPDVPPADRPKYYVLEMFPYPSGQLHMGHVRNYTLGDVVARYKRA RGHSVLHPMGWTRSACRRKTRRANAACTRRPGPGQIAAMRATLKRLGFSFNWDREIATCLPDYYGKQQKLFLDMLGAGLV ERRESWVNWDPVDHTVLANEQVVDGRGWRSGALIEKKQLSQWFLRITKFAPDLLDGLSHLPRWPERVRTMQERWIGRSVG ARVRFALHAPPEGFDTDLDSVEVFTTRPDTLFGMAFLAVAADHPLAAKVAQDNPAAAAFIAECRRLGTSEEAIETAEKRG FDTGLRVSHPFLPDRSFPVWIANFVLMDYGTGAIFGCPCGDQRDLDFANAYHLPFQPVILPPGEDATTFTITGKAWDGDG TLFNSGFLDGLDSATAKAEAITRLEGMGVGRGVVNWRLRDWGISRQRYWGCPIPVIHCASCGAVPVPDDRLPVVLPEDVT FDRPGNPLDHHPTWKHVACPRCGAAATRETDTFDTFVDSSWYFARFTAPHAAAPTVRPAADGWLPVDQYIGGIEHAILHL LYARFFTRAMRETGHVGLDEPFDGLFTQGMVNHESYRDAAGQWLYPEEVDRRADGAVSRDTGAPVTIGRVEKMSKSKRNT VAPVAIIERFGADTARWFVLSDSPPERDMEWTEAGVAGAARFLQRLYRTVRTVAESVQPVAEAAATPTEAADTLRRATHR AIAAVTDALESFAINVAVARLHELTTALAESERASGDDGMDFARREAALTLCLLAAPMVPHQAEDMLALLEPGQSPAVSR PWPVAEPELLVARQVTIAVQIMGKLRGTVAAPPDAPADAVIALAETETNVARLLEGKRIVKRIHVPNRIVNFVIAG
Sequences:
>Translated_876_residues MPRTMIMTENSPAPYDFRTAEPHWQAEWDRAGAFDVPDVPPADRPKYYVLEMFPYPSGQLHMGHVRNYTLGDVVARYKRA RGHSVLHPMGWTRSACRRKTRRANAACTRRPGPGQIAAMRATLKRLGFSFNWDREIATCLPDYYGKQQKLFLDMLGAGLV ERRESWVNWDPVDHTVLANEQVVDGRGWRSGALIEKKQLSQWFLRITKFAPDLLDGLSHLPRWPERVRTMQERWIGRSVG ARVRFALHAPPEGFDTDLDSVEVFTTRPDTLFGMAFLAVAADHPLAAKVAQDNPAAAAFIAECRRLGTSEEAIETAEKRG FDTGLRVSHPFLPDRSFPVWIANFVLMDYGTGAIFGCPCGDQRDLDFANAYHLPFQPVILPPGEDATTFTITGKAWDGDG TLFNSGFLDGLDSATAKAEAITRLEGMGVGRGVVNWRLRDWGISRQRYWGCPIPVIHCASCGAVPVPDDRLPVVLPEDVT FDRPGNPLDHHPTWKHVACPRCGAAATRETDTFDTFVDSSWYFARFTAPHAAAPTVRPAADGWLPVDQYIGGIEHAILHL LYARFFTRAMRETGHVGLDEPFDGLFTQGMVNHESYRDAAGQWLYPEEVDRRADGAVSRDTGAPVTIGRVEKMSKSKRNT VAPVAIIERFGADTARWFVLSDSPPERDMEWTEAGVAGAARFLQRLYRTVRTVAESVQPVAEAAATPTEAADTLRRATHR AIAAVTDALESFAINVAVARLHELTTALAESERASGDDGMDFARREAALTLCLLAAPMVPHQAEDMLALLEPGQSPAVSR PWPVAEPELLVARQVTIAVQIMGKLRGTVAAPPDAPADAVIALAETETNVARLLEGKRIVKRIHVPNRIVNFVIAG >Mature_875_residues PRTMIMTENSPAPYDFRTAEPHWQAEWDRAGAFDVPDVPPADRPKYYVLEMFPYPSGQLHMGHVRNYTLGDVVARYKRAR GHSVLHPMGWTRSACRRKTRRANAACTRRPGPGQIAAMRATLKRLGFSFNWDREIATCLPDYYGKQQKLFLDMLGAGLVE RRESWVNWDPVDHTVLANEQVVDGRGWRSGALIEKKQLSQWFLRITKFAPDLLDGLSHLPRWPERVRTMQERWIGRSVGA RVRFALHAPPEGFDTDLDSVEVFTTRPDTLFGMAFLAVAADHPLAAKVAQDNPAAAAFIAECRRLGTSEEAIETAEKRGF DTGLRVSHPFLPDRSFPVWIANFVLMDYGTGAIFGCPCGDQRDLDFANAYHLPFQPVILPPGEDATTFTITGKAWDGDGT LFNSGFLDGLDSATAKAEAITRLEGMGVGRGVVNWRLRDWGISRQRYWGCPIPVIHCASCGAVPVPDDRLPVVLPEDVTF DRPGNPLDHHPTWKHVACPRCGAAATRETDTFDTFVDSSWYFARFTAPHAAAPTVRPAADGWLPVDQYIGGIEHAILHLL YARFFTRAMRETGHVGLDEPFDGLFTQGMVNHESYRDAAGQWLYPEEVDRRADGAVSRDTGAPVTIGRVEKMSKSKRNTV APVAIIERFGADTARWFVLSDSPPERDMEWTEAGVAGAARFLQRLYRTVRTVAESVQPVAEAAATPTEAADTLRRATHRA IAAVTDALESFAINVAVARLHELTTALAESERASGDDGMDFARREAALTLCLLAAPMVPHQAEDMLALLEPGQSPAVSRP WPVAEPELLVARQVTIAVQIMGKLRGTVAAPPDAPADAVIALAETETNVARLLEGKRIVKRIHVPNRIVNFVIAG
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=867, Percent_Identity=36.1014994232987, Blast_Score=489, Evalue=1e-138, Organism=Escherichia coli, GI1786861, Length=870, Percent_Identity=43.2183908045977, Blast_Score=686, Evalue=0.0, Organism=Caenorhabditis elegans, GI71997510, Length=288, Percent_Identity=36.1111111111111, Blast_Score=179, Evalue=5e-45, Organism=Caenorhabditis elegans, GI71997517, Length=285, Percent_Identity=36.4912280701754, Blast_Score=179, Evalue=6e-45, Organism=Caenorhabditis elegans, GI212645227, Length=319, Percent_Identity=26.3322884012539, Blast_Score=129, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6323414, Length=888, Percent_Identity=35.2477477477478, Blast_Score=516, Evalue=1e-147, Organism=Drosophila melanogaster, GI21355409, Length=787, Percent_Identity=34.9428208386277, Blast_Score=396, Evalue=1e-110,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 96868; Mature: 96737
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTMIMTENSPAPYDFRTAEPHWQAEWDRAGAFDVPDVPPADRPKYYVLEMFPYPSGQL CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCE HMGHVRNYTLGDVVARYKRARGHSVLHPMGWTRSACRRKTRRANAACTRRPGPGQIAAMR EECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHH ATLKRLGFSFNWDREIATCLPDYYGKQQKLFLDMLGAGLVERRESWVNWDPVDHTVLANE HHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCC QVVDGRGWRSGALIEKKQLSQWFLRITKFAPDLLDGLSHLPRWPERVRTMQERWIGRSVG EEECCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC ARVRFALHAPPEGFDTDLDSVEVFTTRPDTLFGMAFLAVAADHPLAAKVAQDNPAAAAFI CEEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHH AECRRLGTSEEAIETAEKRGFDTGLRVSHPFLPDRSFPVWIANFVLMDYGTGAIFGCPCG HHHHHCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCC DQRDLDFANAYHLPFQPVILPPGEDATTFTITGKAWDGDGTLFNSGFLDGLDSATAKAEA CCCCCCHHCEECCCCCCEEECCCCCCEEEEEEEEEECCCCCEECCCCCCCCCHHHHHHHH ITRLEGMGVGRGVVNWRLRDWGISRQRYWGCPIPVIHCASCGAVPVPDDRLPVVLPEDVT HHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEECCCCCC FDRPGNPLDHHPTWKHVACPRCGAAATRETDTFDTFVDSSWYFARFTAPHAAAPTVRPAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCC DGWLPVDQYIGGIEHAILHLLYARFFTRAMRETGHVGLDEPFDGLFTQGMVNHESYRDAA CCCEEHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHC GQWLYPEEVDRRADGAVSRDTGAPVTIGRVEKMSKSKRNTVAPVAIIERFGADTARWFVL CCCCCHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEE SDSPPERDMEWTEAGVAGAARFLQRLYRTVRTVAESVQPVAEAAATPTEAADTLRRATHR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AIAAVTDALESFAINVAVARLHELTTALAESERASGDDGMDFARREAALTLCLLAAPMVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC HQAEDMLALLEPGQSPAVSRPWPVAEPELLVARQVTIAVQIMGKLRGTVAAPPDAPADAV CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE IALAETETNVARLLEGKRIVKRIHVPNRIVNFVIAG EEEECCHHHHHHHHHHHHHHHHHCCCHHHHHEEECC >Mature Secondary Structure PRTMIMTENSPAPYDFRTAEPHWQAEWDRAGAFDVPDVPPADRPKYYVLEMFPYPSGQL CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCE HMGHVRNYTLGDVVARYKRARGHSVLHPMGWTRSACRRKTRRANAACTRRPGPGQIAAMR EECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHH ATLKRLGFSFNWDREIATCLPDYYGKQQKLFLDMLGAGLVERRESWVNWDPVDHTVLANE HHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCC QVVDGRGWRSGALIEKKQLSQWFLRITKFAPDLLDGLSHLPRWPERVRTMQERWIGRSVG EEECCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC ARVRFALHAPPEGFDTDLDSVEVFTTRPDTLFGMAFLAVAADHPLAAKVAQDNPAAAAFI CEEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHH AECRRLGTSEEAIETAEKRGFDTGLRVSHPFLPDRSFPVWIANFVLMDYGTGAIFGCPCG HHHHHCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCC DQRDLDFANAYHLPFQPVILPPGEDATTFTITGKAWDGDGTLFNSGFLDGLDSATAKAEA CCCCCCHHCEECCCCCCEEECCCCCCEEEEEEEEEECCCCCEECCCCCCCCCHHHHHHHH ITRLEGMGVGRGVVNWRLRDWGISRQRYWGCPIPVIHCASCGAVPVPDDRLPVVLPEDVT HHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEECCCCCC FDRPGNPLDHHPTWKHVACPRCGAAATRETDTFDTFVDSSWYFARFTAPHAAAPTVRPAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCC DGWLPVDQYIGGIEHAILHLLYARFFTRAMRETGHVGLDEPFDGLFTQGMVNHESYRDAA CCCEEHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHC GQWLYPEEVDRRADGAVSRDTGAPVTIGRVEKMSKSKRNTVAPVAIIERFGADTARWFVL CCCCCHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEE SDSPPERDMEWTEAGVAGAARFLQRLYRTVRTVAESVQPVAEAAATPTEAADTLRRATHR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AIAAVTDALESFAINVAVARLHELTTALAESERASGDDGMDFARREAALTLCLLAAPMVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC HQAEDMLALLEPGQSPAVSRPWPVAEPELLVARQVTIAVQIMGKLRGTVAAPPDAPADAV CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE IALAETETNVARLLEGKRIVKRIHVPNRIVNFVIAG EEEECCHHHHHHHHHHHHHHHHHCCCHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA