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The map label for this gene is epsD [H]

Identifier: 162148163

GI number: 162148163

Start: 2453313

End: 2454452

Strand: Reverse

Name: epsD [H]

Synonym: GDI_2380

Alternate gene names: 162148163

Gene position: 2454452-2453313 (Counterclockwise)

Preceding gene: 162148164

Following gene: 162148160

Centisome position: 62.23

GC content: 69.82

Gene sequence:

>1140_bases
ATGAAAATTCTCGAAATCACCAATGTCGATTTTTCGCTGCGGCACTTCCTGCTGCCGCTGATGCGGGGCCTGCGCGCCGA
TGGGCACGAGGTCGTCGGCGTCTGCGCGGACGGTCCCCTGCTGGCCGATGTGCGCGGCGAGGGATTCCGCGTCGAGACGG
TGCCGCTGGTCCGATCCTTCTCGCCCCTGGCGCAGATGCAGGCGCTGATCGCGCTGGTCCGGCTGATCCGGGAGGAAAAG
CCGGACATCGTCCACGCCCACATGCCGATCAGCGGCCTGCTGGGCCGCCTGGCGGCGTGGCTGTGCCGCGTGCCGTGCGT
GGCCTATACCTGCCATGGCTTCCTGTTCAACCAGCCGGGGCCCGCCCCACGGCGCGGTCTGGCGCTGGTGCTGGAATGGC
TGGCCGGGCGGATCACCGACCGGTATTTCACCGTATCGGTGCAGGAGGCCGAGGACGCCCGGCGCCTGAAGATCCACCCG
GCGCCGCTGGCGGTGGGCAATGGGCGCAACCCCTCCCTCTTCCAGCCCGATCCCGAGGCACGGCGGCGGATTCGCGCCGA
ACTGGGGGTGGCGGAAGGGGCGGTGGTCATCATCGCCGTGTCACGGCTGGTGCGGCACAAGGGCTATCCGGAACTGCTGA
AGGCGATGGAGCAGGTGTCCGGCGCGATGCTGTGGGTGGTGGGCGAACGCCTGGAGTCCGACCATGGAGAATCGCTCGAT
TCGTGCTTCGAGGAGGCGCAGCGGGTACTTGGCGCGCGGCTGCGGTGCCTGGGCTATCGCGAGGACGTTCCGGCCCTGCT
GGCGGCGGCGGATATCTTCACCCTGCCCAGCCATTTCGAGGGACTGCCGATGTCGGTGATCGAGGCGATGCTGACCGGCC
TGCCGGTGGTGGCCAGCGATATTCGCGGCCCGCGCGAACAGGTCGTGAACGGCCGCACCGGGCTGCTGGTTCCCCCGGGC
GAGGCCGTGCCGCTGGCGCGCTCCCTCGGCTGCCTGGTCCGCGACCCGGACCTGCGCTACCGGATGGGCGAAGTCGGGCG
TGAGCGGGCTCGCGCCCGGTATGACGAGGACATCGTGGTCGGCCGCACCAAGATGGCCCTGCTGGCACCCGGGACGACGC
CGACCGACGATGCCGGCTGA

Upstream 100 bases:

>100_bases
GGCCGAGAGCGGCGAGCGTACACGCCAGGTCGTGCGCTGGGCGTTGATGCAGATGGAAGGGTAGGGGCGCGCCACGCGGC
CTGGTGGCCCGGAACCGGGT

Downstream 100 bases:

>100_bases
CCGCCGTCCCGGTCAGGGCCGGGTACTGCTGCCGTTACTGCTGCTGGCCGGGACCGGCCGGCCCGCCCATGGCCTGCATC
AGGGCCTGGGCTTCCTGGGG

Product: capsular polysaccharide biosynthesis glycosyl transferase cap

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKILEITNVDFSLRHFLLPLMRGLRADGHEVVGVCADGPLLADVRGEGFRVETVPLVRSFSPLAQMQALIALVRLIREEK
PDIVHAHMPISGLLGRLAAWLCRVPCVAYTCHGFLFNQPGPAPRRGLALVLEWLAGRITDRYFTVSVQEAEDARRLKIHP
APLAVGNGRNPSLFQPDPEARRRIRAELGVAEGAVVIIAVSRLVRHKGYPELLKAMEQVSGAMLWVVGERLESDHGESLD
SCFEEAQRVLGARLRCLGYREDVPALLAAADIFTLPSHFEGLPMSVIEAMLTGLPVVASDIRGPREQVVNGRTGLLVPPG
EAVPLARSLGCLVRDPDLRYRMGEVGRERARARYDEDIVVGRTKMALLAPGTTPTDDAG

Sequences:

>Translated_379_residues
MKILEITNVDFSLRHFLLPLMRGLRADGHEVVGVCADGPLLADVRGEGFRVETVPLVRSFSPLAQMQALIALVRLIREEK
PDIVHAHMPISGLLGRLAAWLCRVPCVAYTCHGFLFNQPGPAPRRGLALVLEWLAGRITDRYFTVSVQEAEDARRLKIHP
APLAVGNGRNPSLFQPDPEARRRIRAELGVAEGAVVIIAVSRLVRHKGYPELLKAMEQVSGAMLWVVGERLESDHGESLD
SCFEEAQRVLGARLRCLGYREDVPALLAAADIFTLPSHFEGLPMSVIEAMLTGLPVVASDIRGPREQVVNGRTGLLVPPG
EAVPLARSLGCLVRDPDLRYRMGEVGRERARARYDEDIVVGRTKMALLAPGTTPTDDAG
>Mature_379_residues
MKILEITNVDFSLRHFLLPLMRGLRADGHEVVGVCADGPLLADVRGEGFRVETVPLVRSFSPLAQMQALIALVRLIREEK
PDIVHAHMPISGLLGRLAAWLCRVPCVAYTCHGFLFNQPGPAPRRGLALVLEWLAGRITDRYFTVSVQEAEDARRLKIHP
APLAVGNGRNPSLFQPDPEARRRIRAELGVAEGAVVIIAVSRLVRHKGYPELLKAMEQVSGAMLWVVGERLESDHGESLD
SCFEEAQRVLGARLRCLGYREDVPALLAAADIFTLPSHFEGLPMSVIEAMLTGLPVVASDIRGPREQVVNGRTGLLVPPG
EAVPLARSLGCLVRDPDLRYRMGEVGRERARARYDEDIVVGRTKMALLAPGTTPTDDAG

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41492; Mature: 41492

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILEITNVDFSLRHFLLPLMRGLRADGHEVVGVCADGPLLADVRGEGFRVETVPLVRSF
CEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCEEEEEHHHHHCC
SPLAQMQALIALVRLIREEKPDIVHAHMPISGLLGRLAAWLCRVPCVAYTCHGFLFNQPG
CHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC
PAPRRGLALVLEWLAGRITDRYFTVSVQEAEDARRLKIHPAPLAVGNGRNPSLFQPDPEA
CCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCEEECCCCCCCCCCCCHHH
RRRIRAELGVAEGAVVIIAVSRLVRHKGYPELLKAMEQVSGAMLWVVGERLESDHGESLD
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEEHHHHHCCCCCHHH
SCFEEAQRVLGARLRCLGYREDVPALLAAADIFTLPSHFEGLPMSVIEAMLTGLPVVASD
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHCCCCHHHHH
IRGPREQVVNGRTGLLVPPGEAVPLARSLGCLVRDPDLRYRMGEVGRERARARYDEDIVV
CCCCHHHHCCCCCCEEECCCCCCCHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEE
GRTKMALLAPGTTPTDDAG
CCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MKILEITNVDFSLRHFLLPLMRGLRADGHEVVGVCADGPLLADVRGEGFRVETVPLVRSF
CEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCEEEEEHHHHHCC
SPLAQMQALIALVRLIREEKPDIVHAHMPISGLLGRLAAWLCRVPCVAYTCHGFLFNQPG
CHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC
PAPRRGLALVLEWLAGRITDRYFTVSVQEAEDARRLKIHPAPLAVGNGRNPSLFQPDPEA
CCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCEEECCCCCCCCCCCCHHH
RRRIRAELGVAEGAVVIIAVSRLVRHKGYPELLKAMEQVSGAMLWVVGERLESDHGESLD
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEEHHHHHCCCCCHHH
SCFEEAQRVLGARLRCLGYREDVPALLAAADIFTLPSHFEGLPMSVIEAMLTGLPVVASD
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHCCCCHHHHH
IRGPREQVVNGRTGLLVPPGEAVPLARSLGCLVRDPDLRYRMGEVGRERARARYDEDIVV
CCCCHHHHCCCCCCEEECCCCCCCHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEE
GRTKMALLAPGTTPTDDAG
CCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]