| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is zitB [H]
Identifier: 162148144
GI number: 162148144
Start: 2435193
End: 2436185
Strand: Direct
Name: zitB [H]
Synonym: GDI_2361
Alternate gene names: 162148144
Gene position: 2435193-2436185 (Clockwise)
Preceding gene: 162148141
Following gene: 162148145
Centisome position: 61.74
GC content: 68.38
Gene sequence:
>993_bases ATGACCACGCGCACGATGATGGACATGATCACGGTCACGATCATGGGCATGAGGGGCACGGACATGGATTCGGCCACCAT CACGTCCATGCCCCGGCCAGTTTCGGCGCCGCCTTTTGCGTGGGGCATCGCGCTGAACCTGGTCTATGTCGTCGCCGAGG CGACCTGGGGCGTGCTGTCCCACGCGCTCGCCCTGATGGCGGATGCCGGCCATAACCTGTCCGACGTCCTGGCGCTGGCG GCGGCGTGGATGGCGCAGCACCTGTCGCGGCGCGCGCCCAGCGCCGATTTCACCTATGGACTGCGCCGCTCGTCCATCCT GGCCGCGCTGGGCAATGCGGTGGCGCTGCTGCTGGTCACCGGCGGCATCGTGTGGGAGGCGATCCTGCGCCTGATCAACC CCGCCCCGGTGCCCGGCACCACGATCATGGTGGTGGCGGGGATCGGAATCCTGGTCAACGGGATCACCGCCCTGCTGTTC GCGCGGGGCGGGGAGGACCTGAACATCCGCGCCGCCTTCCTGCACATGGCGGCCGACACGCTGATGACGGTCGCGGTGGT GATCGCGGGCGCGATCATCCTCTATACCGGCTGGACGCGCGTGGACCCCATCGTCAGCCTGGTCGTGTCGGTCACGATCG TCGCCGGCACCTGGTCGCTGCTGCGCGATTCGCTGGACATGGCGCTGGACCGGGTGCCCCGCACGATCGACCGCGCCGGG GTCGAGGCCTATCTGCGCACCCTGCCGGGGGTGCTGGACCTGCACGACCTGCATATCTGGCCGATCAGTACGACGGACAC CGCCCTGACCGTGCATCTGGTGCGCGCCGCCTGCCCCGTTCCTCCGGGGGAGGAAGACGCCAGCGAGGACAGCCTGCTGC GTGACGCGACCGAGGCACTGCGCACGCGCTTTCGCATCGGCCATCCCACCTTCCAGATCGAAACGCTGTCCTATTCCGCA CGATGTGTCCTGGCGGACGCGAACACGATCTGA
Upstream 100 bases:
>100_bases CCGGACGAGAACCACGCCGCCATGGCCGACCCGCACGATCAACCGCCCCCGCACCGGCACGATTCCGCCGAGGACCAAGC GGGAGAGTGTGGCCACGGAC
Downstream 100 bases:
>100_bases CCCATGCCGCATATCAGCAAGAACGCCCTGGCCTGGACCAGCCTGGGGGTCAGCCTGGTCGCCCTGAGCCTGAAATACGC CGCCTGGCGCGTCACCGGCT
Product: Zinc transporter zitB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTTRTMMDMITVTIMGMRGTDMDSATITSMPRPVSAPPFAWGIALNLVYVVAEATWGVLSHALALMADAGHNLSDVLALA AAWMAQHLSRRAPSADFTYGLRRSSILAALGNAVALLLVTGGIVWEAILRLINPAPVPGTTIMVVAGIGILVNGITALLF ARGGEDLNIRAAFLHMAADTLMTVAVVIAGAIILYTGWTRVDPIVSLVVSVTIVAGTWSLLRDSLDMALDRVPRTIDRAG VEAYLRTLPGVLDLHDLHIWPISTTDTALTVHLVRAACPVPPGEEDASEDSLLRDATEALRTRFRIGHPTFQIETLSYSA RCVLADANTI
Sequences:
>Translated_330_residues MTTRTMMDMITVTIMGMRGTDMDSATITSMPRPVSAPPFAWGIALNLVYVVAEATWGVLSHALALMADAGHNLSDVLALA AAWMAQHLSRRAPSADFTYGLRRSSILAALGNAVALLLVTGGIVWEAILRLINPAPVPGTTIMVVAGIGILVNGITALLF ARGGEDLNIRAAFLHMAADTLMTVAVVIAGAIILYTGWTRVDPIVSLVVSVTIVAGTWSLLRDSLDMALDRVPRTIDRAG VEAYLRTLPGVLDLHDLHIWPISTTDTALTVHLVRAACPVPPGEEDASEDSLLRDATEALRTRFRIGHPTFQIETLSYSA RCVLADANTI >Mature_329_residues TTRTMMDMITVTIMGMRGTDMDSATITSMPRPVSAPPFAWGIALNLVYVVAEATWGVLSHALALMADAGHNLSDVLALAA AWMAQHLSRRAPSADFTYGLRRSSILAALGNAVALLLVTGGIVWEAILRLINPAPVPGTTIMVVAGIGILVNGITALLFA RGGEDLNIRAAFLHMAADTLMTVAVVIAGAIILYTGWTRVDPIVSLVVSVTIVAGTWSLLRDSLDMALDRVPRTIDRAGV EAYLRTLPGVLDLHDLHIWPISTTDTALTVHLVRAACPVPPGEEDASEDSLLRDATEALRTRFRIGHPTFQIETLSYSAR CVLADANTI
Specific function: Involved in zinc efflux across the cytoplasmic membrane, thus reducing zinc accumulation in the cytoplasm and rendering bacteria more resistant to zinc. It may contribute to zinc homeostasis at low concentrations of zinc [H]
COG id: COG1230
COG function: function code P; Co/Zn/Cd efflux system component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily [H]
Homologues:
Organism=Homo sapiens, GI52352805, Length=288, Percent_Identity=28.8194444444444, Blast_Score=134, Evalue=8e-32, Organism=Homo sapiens, GI289803013, Length=285, Percent_Identity=28.0701754385965, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI289803009, Length=285, Percent_Identity=28.0701754385965, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI289803007, Length=285, Percent_Identity=28.0701754385965, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI289803003, Length=285, Percent_Identity=28.0701754385965, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI64762489, Length=285, Percent_Identity=28.0701754385965, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI21361112, Length=309, Percent_Identity=27.5080906148867, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI21359890, Length=299, Percent_Identity=25.0836120401338, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI14210520, Length=227, Percent_Identity=28.6343612334802, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI20070323, Length=321, Percent_Identity=24.6105919003115, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI52351208, Length=121, Percent_Identity=34.7107438016529, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1786966, Length=288, Percent_Identity=37.1527777777778, Blast_Score=145, Evalue=5e-36, Organism=Caenorhabditis elegans, GI193210990, Length=296, Percent_Identity=30.0675675675676, Blast_Score=144, Evalue=5e-35, Organism=Caenorhabditis elegans, GI17555796, Length=318, Percent_Identity=31.1320754716981, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17555794, Length=300, Percent_Identity=31.3333333333333, Blast_Score=140, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6323899, Length=126, Percent_Identity=37.3015873015873, Blast_Score=82, Evalue=9e-17, Organism=Saccharomyces cerevisiae, GI6320411, Length=167, Percent_Identity=34.7305389221557, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6324892, Length=124, Percent_Identity=35.4838709677419, Blast_Score=76, Evalue=6e-15, Organism=Drosophila melanogaster, GI24583858, Length=311, Percent_Identity=27.0096463022508, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24584409, Length=161, Percent_Identity=30.4347826086957, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI28574430, Length=162, Percent_Identity=30.2469135802469, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24585900, Length=176, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24585898, Length=176, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24585896, Length=176, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI19921672, Length=176, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24656728, Length=290, Percent_Identity=26.8965517241379, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24656724, Length=290, Percent_Identity=26.8965517241379, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24656720, Length=290, Percent_Identity=26.8965517241379, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24656715, Length=290, Percent_Identity=26.8965517241379, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI21357035, Length=290, Percent_Identity=26.8965517241379, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 35226; Mature: 35094
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRTMMDMITVTIMGMRGTDMDSATITSMPRPVSAPPFAWGIALNLVYVVAEATWGVLS CCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HALALMADAGHNLSDVLALAAAWMAQHLSRRAPSADFTYGLRRSSILAALGNAVALLLVT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GGIVWEAILRLINPAPVPGTTIMVVAGIGILVNGITALLFARGGEDLNIRAAFLHMAADT HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LMTVAVVIAGAIILYTGWTRVDPIVSLVVSVTIVAGTWSLLRDSLDMALDRVPRTIDRAG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEAYLRTLPGVLDLHDLHIWPISTTDTALTVHLVRAACPVPPGEEDASEDSLLRDATEAL HHHHHHHCCCCEEEECEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH RTRFRIGHPTFQIETLSYSARCVLADANTI HHHHHCCCCCEEEEEECCCCEEEEECCCCC >Mature Secondary Structure TTRTMMDMITVTIMGMRGTDMDSATITSMPRPVSAPPFAWGIALNLVYVVAEATWGVLS CHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HALALMADAGHNLSDVLALAAAWMAQHLSRRAPSADFTYGLRRSSILAALGNAVALLLVT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GGIVWEAILRLINPAPVPGTTIMVVAGIGILVNGITALLFARGGEDLNIRAAFLHMAADT HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LMTVAVVIAGAIILYTGWTRVDPIVSLVVSVTIVAGTWSLLRDSLDMALDRVPRTIDRAG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEAYLRTLPGVLDLHDLHIWPISTTDTALTVHLVRAACPVPPGEEDASEDSLLRDATEAL HHHHHHHCCCCEEEECEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH RTRFRIGHPTFQIETLSYSARCVLADANTI HHHHHCCCCCEEEEEECCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]