| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is ytfP [H]
Identifier: 162148130
GI number: 162148130
Start: 2417810
End: 2419060
Strand: Reverse
Name: ytfP [H]
Synonym: GDI_2347
Alternate gene names: 162148130
Gene position: 2419060-2417810 (Counterclockwise)
Preceding gene: 162148131
Following gene: 162148129
Centisome position: 61.33
GC content: 73.3
Gene sequence:
>1251_bases ATGGCCGATATCGTCGTGATCGGTGCGGGGCCCGCCGGCCTGGCCGCCGCCGAAACCCTGGCCGCCCATGGCTGTGCGGT AACGGTGCTGGACCGTATGCCCACCATCGGGCGCAAGATGCTGATGGCCGGCCGGGGTGGACTGAACCTGACCCATTCCG AGCCGTTCGCGCGGTTCGTCACCCGCTATGGCGCGGCCGCGGACTGGCTGGAACCCGCGCTGCGTGCCTTCACCCCCGAC GATCTGCGCCGCTGGGCGGAGGATTTGGGCCAGCCCTGCTATGTCGGCAGCAGCGGCCGGGTCTTTCCGCGCGCGATGAA GGCATCGCCCCTGCTGCGCGCCTGGGGGGCACGGCTGGCGGCGCTGGGGGTGGACATCCGCACCCGCCATGACTGGACGG GCTGGGACGCGCATGGCCGGGTGCGCTTCACCCGCCCCTCGGCCGACGGGTCGGTCGAGCAGGGGACGCTGCCCGCCGAT GCCGTCCTGCTGGCGCTGGGCGGGGCAAGCTGGCCACGCCTGGGGGCGGATGGCACGTGGACCGGCCTGCTGGCCGACCG GGGCATCGGCATCGCCCCGTTTCAACCTGCCAATTGCGGTTTCGTCACGGACTGGAGCGACACCGTACGCGAACGCTTCG CCGGCACGCCGCTGCGCGGCATCGCGCTGACGCCCGACGGATCGGGCCCTACGGTGCGGGGCGAGGCCGTGGTGACGGCG CGCGGTCTGGAAGGCGGCGCGGTCTACGCGCTGTCGGCACTGCTGCGCGACCGGATCGCGGCCCATGGACAGGCCCGGCT GATGCTGGATCTGCGCCCCGACATGGGCGTGGAGGACGTGGCCGCGCGACTGGCCCGCATCCGCGGGCGCGAGAGCCTGT CGAACACGCTACGCAAGGCGTTGCGCCTGCCGCCCGTGGCGGTGGCGCTGCTGCGTGAGGCAGCCCCCCCGCCGCGTGAC GCGGCCGCGCTGGCGCGGCTGGTCAAGGCGGTGCCGGTCACCCTGACGGCGCCCGATTCGCTGGATCGGGCGATCTCGGT GGCGGGCGGGGTGCGGCAGGCCGAGTGCGACGCGCGCTTCATGCTGCGGGCGTCACCCGGCCTGTTCGTGGCGGGCGAGA TGCTGGATTGGGAGGCGCCGACCGGCGGCTACCTGCTGCAGGGCTGCTTCGCGACCGGGCGCGCGGCGGCGAACGGAATC GTCGATTGGTTGCGCGAGCAGGCCAAGGAACGGTATCCGTCCTGTCCATGA
Upstream 100 bases:
>100_bases GCGGTCGACAGGATCGCCCAGGTCTGGCATCGCGGCGTACAGACCGAAGGCGCGCTGATTCCACAATAACGCGGATCACG GGCCCGGTCGCAGGAGCAGG
Downstream 100 bases:
>100_bases CGGTTGCGATCACGATTGGGGATGTGCGCGGCGGCGGCCCCGCCGCGATGGATCTGGCGGAATTGCTGTCCACTCGCCTG TTGGTGCAGGGCAATTCCGG
Product: pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MADIVVIGAGPAGLAAAETLAAHGCAVTVLDRMPTIGRKMLMAGRGGLNLTHSEPFARFVTRYGAAADWLEPALRAFTPD DLRRWAEDLGQPCYVGSSGRVFPRAMKASPLLRAWGARLAALGVDIRTRHDWTGWDAHGRVRFTRPSADGSVEQGTLPAD AVLLALGGASWPRLGADGTWTGLLADRGIGIAPFQPANCGFVTDWSDTVRERFAGTPLRGIALTPDGSGPTVRGEAVVTA RGLEGGAVYALSALLRDRIAAHGQARLMLDLRPDMGVEDVAARLARIRGRESLSNTLRKALRLPPVAVALLREAAPPPRD AAALARLVKAVPVTLTAPDSLDRAISVAGGVRQAECDARFMLRASPGLFVAGEMLDWEAPTGGYLLQGCFATGRAAANGI VDWLREQAKERYPSCP
Sequences:
>Translated_416_residues MADIVVIGAGPAGLAAAETLAAHGCAVTVLDRMPTIGRKMLMAGRGGLNLTHSEPFARFVTRYGAAADWLEPALRAFTPD DLRRWAEDLGQPCYVGSSGRVFPRAMKASPLLRAWGARLAALGVDIRTRHDWTGWDAHGRVRFTRPSADGSVEQGTLPAD AVLLALGGASWPRLGADGTWTGLLADRGIGIAPFQPANCGFVTDWSDTVRERFAGTPLRGIALTPDGSGPTVRGEAVVTA RGLEGGAVYALSALLRDRIAAHGQARLMLDLRPDMGVEDVAARLARIRGRESLSNTLRKALRLPPVAVALLREAAPPPRD AAALARLVKAVPVTLTAPDSLDRAISVAGGVRQAECDARFMLRASPGLFVAGEMLDWEAPTGGYLLQGCFATGRAAANGI VDWLREQAKERYPSCP >Mature_415_residues ADIVVIGAGPAGLAAAETLAAHGCAVTVLDRMPTIGRKMLMAGRGGLNLTHSEPFARFVTRYGAAADWLEPALRAFTPDD LRRWAEDLGQPCYVGSSGRVFPRAMKASPLLRAWGARLAALGVDIRTRHDWTGWDAHGRVRFTRPSADGSVEQGTLPADA VLLALGGASWPRLGADGTWTGLLADRGIGIAPFQPANCGFVTDWSDTVRERFAGTPLRGIALTPDGSGPTVRGEAVVTAR GLEGGAVYALSALLRDRIAAHGQARLMLDLRPDMGVEDVAARLARIRGRESLSNTLRKALRLPPVAVALLREAAPPPRDA AALARLVKAVPVTLTAPDSLDRAISVAGGVRQAECDARFMLRASPGLFVAGEMLDWEAPTGGYLLQGCFATGRAAANGIV DWLREQAKERYPSCP
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 44031; Mature: 43900
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIVVIGAGPAGLAAAETLAAHGCAVTVLDRMPTIGRKMLMAGRGGLNLTHSEPFARFV CCCEEEEECCCCCHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHH TRYGAAADWLEPALRAFTPDDLRRWAEDLGQPCYVGSSGRVFPRAMKASPLLRAWGARLA HHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCHHHHHHHHHHH ALGVDIRTRHDWTGWDAHGRVRFTRPSADGSVEQGTLPADAVLLALGGASWPRLGADGTW HHCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHEEECCCCCCCCCCCCCE TGLLADRGIGIAPFQPANCGFVTDWSDTVRERFAGTPLRGIALTPDGSGPTVRGEAVVTA EEHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCEEEECCCCCCCEECCCEEEEE RGLEGGAVYALSALLRDRIAAHGQARLMLDLRPDMGVEDVAARLARIRGRESLSNTLRKA CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHH LRLPPVAVALLREAAPPPRDAAALARLVKAVPVTLTAPDSLDRAISVAGGVRQAECDARF HCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCEECCCCCEE MLRASPGLFVAGEMLDWEAPTGGYLLQGCFATGRAAANGIVDWLREQAKERYPSCP EEEECCCEEEECCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ADIVVIGAGPAGLAAAETLAAHGCAVTVLDRMPTIGRKMLMAGRGGLNLTHSEPFARFV CCEEEEECCCCCHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHH TRYGAAADWLEPALRAFTPDDLRRWAEDLGQPCYVGSSGRVFPRAMKASPLLRAWGARLA HHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCHHHHHHHHHHH ALGVDIRTRHDWTGWDAHGRVRFTRPSADGSVEQGTLPADAVLLALGGASWPRLGADGTW HHCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHEEECCCCCCCCCCCCCE TGLLADRGIGIAPFQPANCGFVTDWSDTVRERFAGTPLRGIALTPDGSGPTVRGEAVVTA EEHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCEEEECCCCCCCEECCCEEEEE RGLEGGAVYALSALLRDRIAAHGQARLMLDLRPDMGVEDVAARLARIRGRESLSNTLRKA CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHH LRLPPVAVALLREAAPPPRDAAALARLVKAVPVTLTAPDSLDRAISVAGGVRQAECDARF HCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCEECCCCCEE MLRASPGLFVAGEMLDWEAPTGGYLLQGCFATGRAAANGIVDWLREQAKERYPSCP EEEECCCEEEECCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]