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The map label for this gene is ydeR [H]

Identifier: 162148073

GI number: 162148073

Start: 2348781

End: 2349971

Strand: Reverse

Name: ydeR [H]

Synonym: GDI_2290

Alternate gene names: 162148073

Gene position: 2349971-2348781 (Counterclockwise)

Preceding gene: 162148074

Following gene: 162148070

Centisome position: 59.58

GC content: 70.7

Gene sequence:

>1191_bases
ATGAGCAGTATTCCGACCTCGTCATCCGGGGTGATCCGCCTGATCGCGTGCGCCGCGGGCATGGTGGTCGCCAACATCTA
TTACGCCCAGCCGCTGATCGCGCTGATCGGTCCGGATATCGGCCTGGCGCCGGCGTGGCTGGGCAGCATCGTGATGCTGA
CGCAGCTCGGTTACGGTTGCGGGATGATCGGGCTGGTGTCCCTGGCCGACATCGTGGAAAACCGGCTTCTGGTCCTGGCG
GCGCTGGCCGGCCTGTGCGTCACCCTGCTGGCCTCCGCCCTGGCGTCCTCGGCCGCCCTGTTCCTGGCCATGGACTTCGC
CATGGGGGTGTTCGCCACCGCGACGCAGGTCCTGGTGCCCCTGGCGTCCCATCTTTCCGCACCCGAGGATCGGGGCCGGG
TGGTCGGCACGGTCATGGGCGGGCTGATCGGCGGGATCATGCTGGCGCGCCCCGTCGCCAGCCTGCTGGCCGCGCATTTC
GGCTGGCACGCGATCTTCCTGGCATCATGCGGGCTGATGCTGGCGCTGATGGCGGCCCTGGCGTGGAAGCTGCCCCGCCG
CCAGCCGGTGCATGACGGGCTGACCTACCTGCATATCCTGGGCTCGCTGGGCGGCATCCTGGCCGGCACGCCGTTGCTGC
GGCGGCGCGCTTTCTATCAGGGGGCGGCGTTCGCGGCATTCAACATCTTCTGGACGGCGGTGCCGCTGCTGCTGGCCGCC
GCCCCCTTCCGGCTGGGCCAGACGGGGATCGCCCTGTTCGCGCTGGCCGGGGCGGGCGGCGCACTGGCCGCGCCCGTCGC
GGGCCGGCTGGCCGACCGGGGGCTGACCAACCAGGCCACCACCGGGGCCATGCTGACGATCGCCGGCGCCTACGGCCTGG
GACTGGTGGCGGTGGCATGGCACGCGGTGGTGCTGCTGGCGGTGGCGGCGATCCTGCTGGATGCGGGCGTGCAGACCAAC
CAGGTGATCAGCATGCGGGCGATCTACATGCTGCGGCCCGACATACGGGGGCGGCTGAACGCGCTGTTCATGACCATCGT
GTTCCTGTGCGGCGCTACCGGATCGGTGACGGCGGCGGTGCTGTTCCACCATTCCGGGTGGAATGCGGTCACGCTGGCGG
GGGTGGTGCTGGCGCTGGTGGCGCTGACCCGCCAGGTCCTGGCCGGCGAAACGTTTCGCCGGCCAGGATAG

Upstream 100 bases:

>100_bases
ACACGACGGGCGCCACCCGGCCGGTCACGGGCGGCCGGCTGGAAACGCATGGCGTGCCCGATGCGGTTGTCCGCGCCGTC
GCCGCGTCCGGGATAACGGG

Downstream 100 bases:

>100_bases
TCACGCGGCGGATCGGTTCAGGCCTGCGCCCTGGCGGCGATCAGGTCGCGATAGACGGCCAGATAGTCCTCGGCCATGCG
GCGGGCGGTGAAGCGTTCCT

Product: major facilitator superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MSSIPTSSSGVIRLIACAAGMVVANIYYAQPLIALIGPDIGLAPAWLGSIVMLTQLGYGCGMIGLVSLADIVENRLLVLA
ALAGLCVTLLASALASSAALFLAMDFAMGVFATATQVLVPLASHLSAPEDRGRVVGTVMGGLIGGIMLARPVASLLAAHF
GWHAIFLASCGLMLALMAALAWKLPRRQPVHDGLTYLHILGSLGGILAGTPLLRRRAFYQGAAFAAFNIFWTAVPLLLAA
APFRLGQTGIALFALAGAGGALAAPVAGRLADRGLTNQATTGAMLTIAGAYGLGLVAVAWHAVVLLAVAAILLDAGVQTN
QVISMRAIYMLRPDIRGRLNALFMTIVFLCGATGSVTAAVLFHHSGWNAVTLAGVVLALVALTRQVLAGETFRRPG

Sequences:

>Translated_396_residues
MSSIPTSSSGVIRLIACAAGMVVANIYYAQPLIALIGPDIGLAPAWLGSIVMLTQLGYGCGMIGLVSLADIVENRLLVLA
ALAGLCVTLLASALASSAALFLAMDFAMGVFATATQVLVPLASHLSAPEDRGRVVGTVMGGLIGGIMLARPVASLLAAHF
GWHAIFLASCGLMLALMAALAWKLPRRQPVHDGLTYLHILGSLGGILAGTPLLRRRAFYQGAAFAAFNIFWTAVPLLLAA
APFRLGQTGIALFALAGAGGALAAPVAGRLADRGLTNQATTGAMLTIAGAYGLGLVAVAWHAVVLLAVAAILLDAGVQTN
QVISMRAIYMLRPDIRGRLNALFMTIVFLCGATGSVTAAVLFHHSGWNAVTLAGVVLALVALTRQVLAGETFRRPG
>Mature_395_residues
SSIPTSSSGVIRLIACAAGMVVANIYYAQPLIALIGPDIGLAPAWLGSIVMLTQLGYGCGMIGLVSLADIVENRLLVLAA
LAGLCVTLLASALASSAALFLAMDFAMGVFATATQVLVPLASHLSAPEDRGRVVGTVMGGLIGGIMLARPVASLLAAHFG
WHAIFLASCGLMLALMAALAWKLPRRQPVHDGLTYLHILGSLGGILAGTPLLRRRAFYQGAAFAAFNIFWTAVPLLLAAA
PFRLGQTGIALFALAGAGGALAAPVAGRLADRGLTNQATTGAMLTIAGAYGLGLVAVAWHAVVLLAVAAILLDAGVQTNQ
VISMRAIYMLRPDIRGRLNALFMTIVFLCGATGSVTAAVLFHHSGWNAVTLAGVVLALVALTRQVLAGETFRRPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40651; Mature: 40520

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS00136 SUBTILASE_ASP ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIPTSSSGVIRLIACAAGMVVANIYYAQPLIALIGPDIGLAPAWLGSIVMLTQLGYGC
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
GMIGLVSLADIVENRLLVLAALAGLCVTLLASALASSAALFLAMDFAMGVFATATQVLVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASHLSAPEDRGRVVGTVMGGLIGGIMLARPVASLLAAHFGWHAIFLASCGLMLALMAAL
HHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWKLPRRQPVHDGLTYLHILGSLGGILAGTPLLRRRAFYQGAAFAAFNIFWTAVPLLLAA
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
APFRLGQTGIALFALAGAGGALAAPVAGRLADRGLTNQATTGAMLTIAGAYGLGLVAVAW
CCHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHEEHHHHHHHHHHHHH
HAVVLLAVAAILLDAGVQTNQVISMRAIYMLRPDIRGRLNALFMTIVFLCGATGSVTAAV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHEEH
LFHHSGWNAVTLAGVVLALVALTRQVLAGETFRRPG
EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SSIPTSSSGVIRLIACAAGMVVANIYYAQPLIALIGPDIGLAPAWLGSIVMLTQLGYGC
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
GMIGLVSLADIVENRLLVLAALAGLCVTLLASALASSAALFLAMDFAMGVFATATQVLVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASHLSAPEDRGRVVGTVMGGLIGGIMLARPVASLLAAHFGWHAIFLASCGLMLALMAAL
HHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWKLPRRQPVHDGLTYLHILGSLGGILAGTPLLRRRAFYQGAAFAAFNIFWTAVPLLLAA
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
APFRLGQTGIALFALAGAGGALAAPVAGRLADRGLTNQATTGAMLTIAGAYGLGLVAVAW
CCHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHEEHHHHHHHHHHHHH
HAVVLLAVAAILLDAGVQTNQVISMRAIYMLRPDIRGRLNALFMTIVFLCGATGSVTAAV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHEEH
LFHHSGWNAVTLAGVVLALVALTRQVLAGETFRRPG
EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]