BacMap

Definition	Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession	NC_010125
Length	3,944,163

Click here to switch to the map view.

The map label for this gene is fabG [C]

Identifier: 162148062

GI number: 162148062

Start: 2340184

End: 2340981

Strand: Reverse

Name: fabG [C]

Synonym: GDI_2279

Alternate gene names: 162148062

Gene position: 2340981-2340184 (Counterclockwise)

Preceding gene: 162148063

Following gene: 162148061

Centisome position: 59.35

GC content: 69.17

Gene sequence:

>798_bases
GTGCCATCGCCGAAGGCGGCTGATCCCGGTCGGGAGGCAGATATCATGACGGCAAATGAAACGCGGCGCATCGCGCTGGT
CACCGGCGCGGTGCGCGGAATCGGGCTGGAAACCGCACGCCAACTGGCGCGGCAGGGGATTCACGTCCTGGTCGCCGGCC
GCAGGCAGGAGCAGGCGGATGGCGTGGCCGACCGGCTGCGCGGCGAGGGCCTGTCGGCCGAGGGCGTGGTGCTGGACATC
GACAACCCGGCGCAGCTGACCGCGCTGCGCGATTACATCGCCACGACCTACGGGCGTCTGGACATCCTGGTGAACAATGC
GGGTGTCCTGCTGGACCGGGGGGCGGACGGGGCGGCCCCGCCGCCGTCGGCGACGCCGGACAAGACGTTGCGGGACACGT
TCGAGATCAACCTGTTCGCGACCGTGCAGGTGACGCAGACGCTGCTGCCGCTGGTCCTGAAATCGCCGGCCGGGCGGATC
GTCAACCTGTCCAGCATCCTTGCGTCACTGGGCGCGCACAGCGATCCGGCCTCGCCGATCTACGGCAAGCTGACCTTCGC
CTATGATGCGTCCAAGACGGCGCTGAACGCCTTTACCGTGCACCTGGCGCACGAGCTGAAGGACACGGCGGTCAAGGTCA
ATTCCGCCCATCCGGGTTGGGTGCGCACCGACATGGGCGGGCAGGACGCGCCGCTGGACGTGGCCCAGGGCGCACTGACC
AGCGTGCGGCTGGCGACCCTGCCCGATGACGGCCCGACCGGCGGCTTCTTTCACATGGATCACGCGCTGCCCTGGTGA

Upstream 100 bases:

>100_bases
GTCCCCGGCCTGTACGCGGTCGGCGAGGCCGTGGACGTGACGGGCTGGCTGGGCGGCTATAATTTTCAATGGGCCTGGGC
CAGCGGCCACGCGGCGGGAC

Downstream 100 bases:

>100_bases
GGCATTTCCACTCGGCGCCATGCCCGTGGTATCCGGCGGGCCGGGGCACTCTGCGACAGGGATGGACGCGACGGCATGGC
GGGCAGGCGGGATGACCACG

Product: short-chain dehydrogenase

Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MPSPKAADPGREADIMTANETRRIALVTGAVRGIGLETARQLARQGIHVLVAGRRQEQADGVADRLRGEGLSAEGVVLDI
DNPAQLTALRDYIATTYGRLDILVNNAGVLLDRGADGAAPPPSATPDKTLRDTFEINLFATVQVTQTLLPLVLKSPAGRI
VNLSSILASLGAHSDPASPIYGKLTFAYDASKTALNAFTVHLAHELKDTAVKVNSAHPGWVRTDMGGQDAPLDVAQGALT
SVRLATLPDDGPTGGFFHMDHALPW

Sequences:

>Translated_265_residues
MPSPKAADPGREADIMTANETRRIALVTGAVRGIGLETARQLARQGIHVLVAGRRQEQADGVADRLRGEGLSAEGVVLDI
DNPAQLTALRDYIATTYGRLDILVNNAGVLLDRGADGAAPPPSATPDKTLRDTFEINLFATVQVTQTLLPLVLKSPAGRI
VNLSSILASLGAHSDPASPIYGKLTFAYDASKTALNAFTVHLAHELKDTAVKVNSAHPGWVRTDMGGQDAPLDVAQGALT
SVRLATLPDDGPTGGFFHMDHALPW
>Mature_264_residues
PSPKAADPGREADIMTANETRRIALVTGAVRGIGLETARQLARQGIHVLVAGRRQEQADGVADRLRGEGLSAEGVVLDID
NPAQLTALRDYIATTYGRLDILVNNAGVLLDRGADGAAPPPSATPDKTLRDTFEINLFATVQVTQTLLPLVLKSPAGRIV
NLSSILASLGAHSDPASPIYGKLTFAYDASKTALNAFTVHLAHELKDTAVKVNSAHPGWVRTDMGGQDAPLDVAQGALTS
VRLATLPDDGPTGGFFHMDHALPW

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4502599, Length=281, Percent_Identity=33.4519572953737, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI4502601, Length=282, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI225579078, Length=211, Percent_Identity=33.6492890995261, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI32483357, Length=209, Percent_Identity=32.5358851674641, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI33667109, Length=203, Percent_Identity=31.0344827586207, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI5031737, Length=203, Percent_Identity=31.0344827586207, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI126723191, Length=220, Percent_Identity=31.8181818181818, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI186928839, Length=260, Percent_Identity=28.8461538461538, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI10190746, Length=270, Percent_Identity=31.4814814814815, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI7706318, Length=213, Percent_Identity=30.9859154929577, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI193804850, Length=219, Percent_Identity=31.9634703196347, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI40548397, Length=224, Percent_Identity=26.7857142857143, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI214010158, Length=224, Percent_Identity=26.7857142857143, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI214010156, Length=224, Percent_Identity=26.7857142857143, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI22758144, Length=224, Percent_Identity=26.7857142857143, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI7706523, Length=266, Percent_Identity=28.9473684210526, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI19743808, Length=232, Percent_Identity=29.3103448275862, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI166795268, Length=212, Percent_Identity=32.0754716981132, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI10190704, Length=198, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI20149619, Length=212, Percent_Identity=28.7735849056604, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI7657478, Length=244, Percent_Identity=27.0491803278689, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI142976729, Length=245, Percent_Identity=27.3469387755102, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI157739938, Length=246, Percent_Identity=24.7967479674797, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI40254992, Length=207, Percent_Identity=27.0531400966184, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI126723750, Length=230, Percent_Identity=28.2608695652174, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI150247226, Length=217, Percent_Identity=28.110599078341, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1787335, Length=203, Percent_Identity=30.0492610837438, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1786701, Length=214, Percent_Identity=33.6448598130841, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI87082100, Length=210, Percent_Identity=34.2857142857143, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1790717, Length=200, Percent_Identity=27, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1787905, Length=246, Percent_Identity=28.0487804878049, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787526, Length=209, Percent_Identity=36.8421052631579, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1787820, Length=200, Percent_Identity=32, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI87082160, Length=216, Percent_Identity=27.3148148148148, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1788459, Length=210, Percent_Identity=31.4285714285714, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI2367175, Length=216, Percent_Identity=29.6296296296296, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17532177, Length=230, Percent_Identity=33.0434782608696, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17558990, Length=252, Percent_Identity=31.7460317460317, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17560332, Length=206, Percent_Identity=33.9805825242718, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17562990, Length=205, Percent_Identity=32.6829268292683, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17560150, Length=205, Percent_Identity=33.1707317073171, Blast_Score=90, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17560220, Length=210, Percent_Identity=34.2857142857143, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI72001658, Length=227, Percent_Identity=32.5991189427313, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17559104, Length=237, Percent_Identity=29.535864978903, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17531453, Length=206, Percent_Identity=35.4368932038835, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI193204405, Length=210, Percent_Identity=34.2857142857143, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17559964, Length=247, Percent_Identity=31.5789473684211, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17560676, Length=205, Percent_Identity=30.7317073170732, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17561402, Length=235, Percent_Identity=28.5106382978723, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI193207563, Length=247, Percent_Identity=30.3643724696356, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17562910, Length=208, Percent_Identity=31.25, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17565030, Length=211, Percent_Identity=31.7535545023697, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17538486, Length=247, Percent_Identity=28.3400809716599, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17542178, Length=230, Percent_Identity=30.8695652173913, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17538480, Length=221, Percent_Identity=30.7692307692308, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17562908, Length=216, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17541382, Length=255, Percent_Identity=27.4509803921569, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17559962, Length=245, Percent_Identity=27.7551020408163, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17562906, Length=235, Percent_Identity=32.3404255319149, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17551412, Length=207, Percent_Identity=28.9855072463768, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=216, Percent_Identity=28.7037037037037, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=213, Percent_Identity=30.5164319248826, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17555706, Length=215, Percent_Identity=27.906976744186, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17558994, Length=250, Percent_Identity=26.4, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI71994600, Length=213, Percent_Identity=28.6384976525822, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17544670, Length=207, Percent_Identity=27.0531400966184, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17558996, Length=266, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI72000259, Length=205, Percent_Identity=29.7560975609756, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17558992, Length=250, Percent_Identity=30.8, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71994604, Length=212, Percent_Identity=28.3018867924528, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71992402, Length=253, Percent_Identity=30.0395256916996, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17508895, Length=207, Percent_Identity=25.1207729468599, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=210, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6322067, Length=209, Percent_Identity=29.6650717703349, Blast_Score=75, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6322227, Length=205, Percent_Identity=32.1951219512195, Blast_Score=75, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24640547, Length=263, Percent_Identity=30.7984790874525, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI45554248, Length=259, Percent_Identity=32.4324324324324, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24640117, Length=259, Percent_Identity=32.4324324324324, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI23397609, Length=205, Percent_Identity=33.6585365853659, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI28571526, Length=214, Percent_Identity=31.3084112149533, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI21355319, Length=203, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21357041, Length=211, Percent_Identity=30.8056872037915, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI21358495, Length=217, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24644339, Length=216, Percent_Identity=31.0185185185185, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24643142, Length=209, Percent_Identity=33.9712918660287, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI45553409, Length=259, Percent_Identity=28.957528957529, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24647948, Length=259, Percent_Identity=28.957528957529, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24647946, Length=259, Percent_Identity=28.957528957529, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28573296, Length=216, Percent_Identity=31.4814814814815, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI20129347, Length=263, Percent_Identity=28.1368821292776, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI161076933, Length=246, Percent_Identity=29.2682926829268, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24584748, Length=246, Percent_Identity=29.2682926829268, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24640442, Length=250, Percent_Identity=29.6, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24648944, Length=206, Percent_Identity=29.126213592233, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24586328, Length=217, Percent_Identity=33.1797235023041, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28571387, Length=207, Percent_Identity=26.5700483091787, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI21357673, Length=206, Percent_Identity=26.6990291262136, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI19921754, Length=216, Percent_Identity=30.0925925925926, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24665243, Length=208, Percent_Identity=28.8461538461538, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221331218, Length=208, Percent_Identity=28.8461538461538, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI116007236, Length=214, Percent_Identity=28.5046728971963, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.1.1.100 [C]

Molecular weight: Translated: 27934; Mature: 27803

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPKAADPGREADIMTANETRRIALVTGAVRGIGLETARQLARQGIHVLVAGRRQEQAD
CCCCCCCCCCCCCEEEECCCCEEEEEEECCHHCCCHHHHHHHHHCCEEEEEECCCCHHHC
GVADRLRGEGLSAEGVVLDIDNPAQLTALRDYIATTYGRLDILVNNAGVLLDRGADGAAP
CHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEEEECCCEEEECCCCCCCC
PPSATPDKTLRDTFEINLFATVQVTQTLLPLVLKSPAGRIVNLSSILASLGAHSDPASPI
CCCCCCCCHHHHEEEEEEEEEEHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCCC
YGKLTFAYDASKTALNAFTVHLAHELKDTAVKVNSAHPGWVRTDMGGQDAPLDVAQGALT
EEEEEEEECCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCCCCHHHHHCCHH
SVRLATLPDDGPTGGFFHMDHALPW
EEEEEECCCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
PSPKAADPGREADIMTANETRRIALVTGAVRGIGLETARQLARQGIHVLVAGRRQEQAD
CCCCCCCCCCCCEEEECCCCEEEEEEECCHHCCCHHHHHHHHHCCEEEEEECCCCHHHC
GVADRLRGEGLSAEGVVLDIDNPAQLTALRDYIATTYGRLDILVNNAGVLLDRGADGAAP
CHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEEEECCCEEEECCCCCCCC
PPSATPDKTLRDTFEINLFATVQVTQTLLPLVLKSPAGRIVNLSSILASLGAHSDPASPI
CCCCCCCCHHHHEEEEEEEEEEHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCCC
YGKLTFAYDASKTALNAFTVHLAHELKDTAVKVNSAHPGWVRTDMGGQDAPLDVAQGALT
EEEEEEEECCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCCCCHHHHHCCHH
SVRLATLPDDGPTGGFFHMDHALPW
EEEEEECCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NADPH [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]

Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]

General reaction: Redox reaction [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1508151 [H]