| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is yhjG [C]
Identifier: 162148057
GI number: 162148057
Start: 2331424
End: 2333907
Strand: Reverse
Name: yhjG [C]
Synonym: GDI_2273
Alternate gene names: 162148057
Gene position: 2333907-2331424 (Counterclockwise)
Preceding gene: 162148058
Following gene: 162148056
Centisome position: 59.17
GC content: 73.51
Gene sequence:
>2484_bases ATGGCGGACAGGAACGGAGGACAGCCCATGACGGGACCGGGGGCACGTTCGGGGCGGGGCCGTGCCTGGCTGCTGGCATC GGTGGCGGCGGTCGTGCTCGTGGCAGGCAGCGCCACCATGGCGGCGCGGGCCATGATCGACCCCGCCAGCCTGCGCCAGC AGGCGGTGGCGGCCGTCTGGCGCCAGACCGGGCGCGTGCTGCGGGTGGGTACGCTGGACGTGCGCATCCTGCCCTATCCC TCGGTGTCCGTTCGCGACCTTGCGCTGTCGGACATGGCGGGCGGGGCGCGACCGGACATGCTGACCGCCACCGGGCTGGA TGCGCGGCTGGCCATCCTGCCGCTGCTGCATCACGAAATCCGGCTGGAGGACGTGCGCCTGACCCACCCCGACCTGCTGG TCGAACGGATGGCCGACGGACGGGCGAACTGGCAGATGCATCCGCAGCCCGACACGGCACCGGCCGCGTCCAACCCCGGC GGATCGTCGCATTCTGCCCGCTGGGCGGTGCGCATCGGCAGCGTGCGGGTGCGCGATGCCGTCGTGACCTGGGATGACCG GCAGGCCCATGGCACGGGAACGGTCGCGCTGGATCGTGTGGCGCTGGACGGGCTGACGGGGTCGGCGCCGTCCTTCGACG TGCAGGGACATCGCCCCGCGGATGCCGGTGCCGGCTTCACGATGCAGGGCCAGGTCGGCCCCCTTGTTACGCCATCTTCC GACCCGTGGAAGGTGCGGGTCCAGGCGGCGTTCCTGCTGGACGGCCAGCCGGGCGGCAGCCTGGGGCTGGACGGCGCGCT GTCCGATCCGGCGCATCTGCGCGGCTATGACGTCACGCTGCATGCCACGGCGGGCCAGGTTTCGGGGCTGAACCGCCTGT TCGTGCATGCCGGCCTGCCGGATGTGCGGAATGTCGATCTCGCGGCCCGGATCGTCGACATGGCGGATGGCGACGCCGCG CCGCAACCCGGCCTGCGCATGCTGCATCTGCGGGCTGGTCCGGTCGATGCCGGCCAGGTCGTGCCGGCCCTGCGGCTGGA CCATCTGGCGATCGACGCGCCGACCCCGGCCGATCACATGACGATCCAGGCGGCCGGGACGTACGGCGCGCGACCGTTCG ACCTGCATGGCACGGTGGGCACCTTGTCCGAAACCATCGCGGCAGCGCGCAGCCGGCTGGGCAGTCCCATGCCGCTGGAC CTGTCCGGGGACGTCGCGGGGGCGGCCCTGCACGGGGGCGGCAGCATCGGCGGCGGCCAGTCCGACCTGGATCTCCATGT CGCCGCCGATCGTCTGGCGCTGCCCGGCGACCGGGTTCTGGACCATCTGACCGCCGATGCCCATGTCGCGATGCAGGGCG GGGACAGCGTTCGCCTGTCGGGCCTGCGGGTGATGCCACCCCAGATGGCGCTGGCCGGCGGGCTGGATTTCACCCGCCAT GGCGGAACGGGCGGCGTTCCGCTGCTGGGCGGCCGGATACGGGCCGACAGGCTGGACCTGGACGCGCTGCACATCACGGC CCCGCACGCCGCCGCCCCCACGCCCCGGGCCCCGGCGCCGGACACGACCGCCCCTGCCGCGCCGGCACCAGCGCCGGCAC CGGCCGACGCCGTCCTGCCGTTCGACCGGCTGCGGCGGATGAATATCGACCTCGATCTCGCGGCGTCGCAGCTTCGGCTG AACGGCGACGATTATCATGACGCGCTGGCGCACGTGCTGCTGCGCGGCGGCCGGCTGGTGATCGACCCGCTGCGCGCGGA CGGCGCGGGCCGCCACCTGAACGGTACGATCACGGTCGATGCGTCGGGCGACGTGCCGCGTCTTTCGGCCAGCGTGGGAT CGCTGGTCCTGCCGGCCGAATGGGTGGCGGCTCAGGCCGGTATCCCCGCGTCGGTGCATGGCGCGTTGCAGATGGTCGGC GTCCTGGACACGCAGGGGACGACGCGCGCGGCGCTACGGTCCGCGCTGGCCGGCCATCTGGGCCTGTCGCTGGTCAACGG GCAGATCGACGGTGCGGCCCTGGGCCGCCTGCTGGGTCCGGGTGCGGCCGGCGCGGCGCAGGACGCCCTGGGCGGGCTGC GCTGCTTCGGGGTGCATATGGCGCTGGGCGGCGGCCAGGCCACGCTGGATACGATCGGCATGCAGACCCGCCGCCTGTCG GTCACCGGGCATGGAACGGTCGGACTGGTCCGGCAGGACCTGGACCTGCATCTGGTTCCGCAACTGCTGATCGGCTCGAC CGGGGCGGCGATGCCGGTCGAGATCGGCGGCACGATCCAGGCGCCGCAGCCGCGCCTGGACCCGGCAGGTGCCGGGCGGC GGTTCGTCCTGACCATCGGCCCGTCCTCCGGCATCGCCGATCCATGCCCCGCCGCATTGCAGGCGGCGCGCGAGGGCCAG CCCGGCCCGGCCCCCGGGGCCGCGCCCAAGGCCAAGGCGCCAAAGGTCATGGACATGCTGCGCGGCCTGGGACTGTTCCG ATGA
Upstream 100 bases:
>100_bases GCTGGTGGTATCGGCCGACCTGCCGTCCCACATGCGTGAAACCTTCCGGCAACTGGGCTTCAGTGCCGGGGCCACCCAGC CGCCACGACGGGGCTGAACG
Downstream 100 bases:
>100_bases GCGGCGATCCGGCGCGGGACGACGCCCGCAAGCGCTTCTGGGACCAGGCCACGGTCGAAACGCTGCCGGACGGATTCGCC GTCCTGCTGGACGGCCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipopolysaccharide Biogenesis Periplasmic Protein AsmA
Number of amino acids: Translated: 827; Mature: 826
Protein sequence:
>827_residues MADRNGGQPMTGPGARSGRGRAWLLASVAAVVLVAGSATMAARAMIDPASLRQQAVAAVWRQTGRVLRVGTLDVRILPYP SVSVRDLALSDMAGGARPDMLTATGLDARLAILPLLHHEIRLEDVRLTHPDLLVERMADGRANWQMHPQPDTAPAASNPG GSSHSARWAVRIGSVRVRDAVVTWDDRQAHGTGTVALDRVALDGLTGSAPSFDVQGHRPADAGAGFTMQGQVGPLVTPSS DPWKVRVQAAFLLDGQPGGSLGLDGALSDPAHLRGYDVTLHATAGQVSGLNRLFVHAGLPDVRNVDLAARIVDMADGDAA PQPGLRMLHLRAGPVDAGQVVPALRLDHLAIDAPTPADHMTIQAAGTYGARPFDLHGTVGTLSETIAAARSRLGSPMPLD LSGDVAGAALHGGGSIGGGQSDLDLHVAADRLALPGDRVLDHLTADAHVAMQGGDSVRLSGLRVMPPQMALAGGLDFTRH GGTGGVPLLGGRIRADRLDLDALHITAPHAAAPTPRAPAPDTTAPAAPAPAPAPADAVLPFDRLRRMNIDLDLAASQLRL NGDDYHDALAHVLLRGGRLVIDPLRADGAGRHLNGTITVDASGDVPRLSASVGSLVLPAEWVAAQAGIPASVHGALQMVG VLDTQGTTRAALRSALAGHLGLSLVNGQIDGAALGRLLGPGAAGAAQDALGGLRCFGVHMALGGGQATLDTIGMQTRRLS VTGHGTVGLVRQDLDLHLVPQLLIGSTGAAMPVEIGGTIQAPQPRLDPAGAGRRFVLTIGPSSGIADPCPAALQAAREGQ PGPAPGAAPKAKAPKVMDMLRGLGLFR
Sequences:
>Translated_827_residues MADRNGGQPMTGPGARSGRGRAWLLASVAAVVLVAGSATMAARAMIDPASLRQQAVAAVWRQTGRVLRVGTLDVRILPYP SVSVRDLALSDMAGGARPDMLTATGLDARLAILPLLHHEIRLEDVRLTHPDLLVERMADGRANWQMHPQPDTAPAASNPG GSSHSARWAVRIGSVRVRDAVVTWDDRQAHGTGTVALDRVALDGLTGSAPSFDVQGHRPADAGAGFTMQGQVGPLVTPSS DPWKVRVQAAFLLDGQPGGSLGLDGALSDPAHLRGYDVTLHATAGQVSGLNRLFVHAGLPDVRNVDLAARIVDMADGDAA PQPGLRMLHLRAGPVDAGQVVPALRLDHLAIDAPTPADHMTIQAAGTYGARPFDLHGTVGTLSETIAAARSRLGSPMPLD LSGDVAGAALHGGGSIGGGQSDLDLHVAADRLALPGDRVLDHLTADAHVAMQGGDSVRLSGLRVMPPQMALAGGLDFTRH GGTGGVPLLGGRIRADRLDLDALHITAPHAAAPTPRAPAPDTTAPAAPAPAPAPADAVLPFDRLRRMNIDLDLAASQLRL NGDDYHDALAHVLLRGGRLVIDPLRADGAGRHLNGTITVDASGDVPRLSASVGSLVLPAEWVAAQAGIPASVHGALQMVG VLDTQGTTRAALRSALAGHLGLSLVNGQIDGAALGRLLGPGAAGAAQDALGGLRCFGVHMALGGGQATLDTIGMQTRRLS VTGHGTVGLVRQDLDLHLVPQLLIGSTGAAMPVEIGGTIQAPQPRLDPAGAGRRFVLTIGPSSGIADPCPAALQAAREGQ PGPAPGAAPKAKAPKVMDMLRGLGLFR >Mature_826_residues ADRNGGQPMTGPGARSGRGRAWLLASVAAVVLVAGSATMAARAMIDPASLRQQAVAAVWRQTGRVLRVGTLDVRILPYPS VSVRDLALSDMAGGARPDMLTATGLDARLAILPLLHHEIRLEDVRLTHPDLLVERMADGRANWQMHPQPDTAPAASNPGG SSHSARWAVRIGSVRVRDAVVTWDDRQAHGTGTVALDRVALDGLTGSAPSFDVQGHRPADAGAGFTMQGQVGPLVTPSSD PWKVRVQAAFLLDGQPGGSLGLDGALSDPAHLRGYDVTLHATAGQVSGLNRLFVHAGLPDVRNVDLAARIVDMADGDAAP QPGLRMLHLRAGPVDAGQVVPALRLDHLAIDAPTPADHMTIQAAGTYGARPFDLHGTVGTLSETIAAARSRLGSPMPLDL SGDVAGAALHGGGSIGGGQSDLDLHVAADRLALPGDRVLDHLTADAHVAMQGGDSVRLSGLRVMPPQMALAGGLDFTRHG GTGGVPLLGGRIRADRLDLDALHITAPHAAAPTPRAPAPDTTAPAAPAPAPAPADAVLPFDRLRRMNIDLDLAASQLRLN GDDYHDALAHVLLRGGRLVIDPLRADGAGRHLNGTITVDASGDVPRLSASVGSLVLPAEWVAAQAGIPASVHGALQMVGV LDTQGTTRAALRSALAGHLGLSLVNGQIDGAALGRLLGPGAAGAAQDALGGLRCFGVHMALGGGQATLDTIGMQTRRLSV TGHGTVGLVRQDLDLHLVPQLLIGSTGAAMPVEIGGTIQAPQPRLDPAGAGRRFVLTIGPSSGIADPCPAALQAAREGQP GPAPGAAPKAKAPKVMDMLRGLGLFR
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84624; Mature: 84492
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRNGGQPMTGPGARSGRGRAWLLASVAAVVLVAGSATMAARAMIDPASLRQQAVAAVW CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHH RQTGRVLRVGTLDVRILPYPSVSVRDLALSDMAGGARPDMLTATGLDARLAILPLLHHEI HHCCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHE RLEDVRLTHPDLLVERMADGRANWQMHPQPDTAPAASNPGGSSHSARWAVRIGSVRVRDA EEEEEEECCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEE VVTWDDRQAHGTGTVALDRVALDGLTGSAPSFDVQGHRPADAGAGFTMQGQVGPLVTPSS EEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEECCCC DPWKVRVQAAFLLDGQPGGSLGLDGALSDPAHLRGYDVTLHATAGQVSGLNRLFVHAGLP CCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCC DVRNVDLAARIVDMADGDAAPQPGLRMLHLRAGPVDAGQVVPALRLDHLAIDAPTPADHM CCCCCCHHEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHEECEEEECCCCCCCCE TIQAAGTYGARPFDLHGTVGTLSETIAAARSRLGSPMPLDLSGDVAGAALHGGGSIGGGQ EEEECCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCC SDLDLHVAADRLALPGDRVLDHLTADAHVAMQGGDSVRLSGLRVMPPQMALAGGLDFTRH CCEEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCEEEECCEEECCCHHHHHCCCCEEEC GGTGGVPLLGGRIRADRLDLDALHITAPHAAAPTPRAPAPDTTAPAAPAPAPAPADAVLP CCCCCCCEECCEEECCEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FDRLRRMNIDLDLAASQLRLNGDDYHDALAHVLLRGGRLVIDPLRADGAGRHLNGTITVD HHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEECEEEEEE ASGDVPRLSASVGSLVLPAEWVAAQAGIPASVHGALQMVGVLDTQGTTRAALRSALAGHL CCCCCCCHHHCCCCEEECHHHHHHHCCCCHHHHHHEEEEEEECCCCCHHHHHHHHHHHHH GLSLVNGQIDGAALGRLLGPGAAGAAQDALGGLRCFGVHMALGGGQATLDTIGMQTRRLS CEEEECCCCCHHHHHHHHCCCCCCHHHHHHCCEEEEEEEEEECCCCEEHHHHCCEEEEEE VTGHGTVGLVRQDLDLHLVPQLLIGSTGAAMPVEIGGTIQAPQPRLDPAGAGRRFVLTIG EECCCEEEEEECCCCCEEEHHHHHCCCCCCCEEEECCEECCCCCCCCCCCCCCEEEEEEC PSSGIADPCPAALQAAREGQPGPAPGAAPKAKAPKVMDMLRGLGLFR CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure ADRNGGQPMTGPGARSGRGRAWLLASVAAVVLVAGSATMAARAMIDPASLRQQAVAAVW CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHH RQTGRVLRVGTLDVRILPYPSVSVRDLALSDMAGGARPDMLTATGLDARLAILPLLHHEI HHCCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHE RLEDVRLTHPDLLVERMADGRANWQMHPQPDTAPAASNPGGSSHSARWAVRIGSVRVRDA EEEEEEECCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEE VVTWDDRQAHGTGTVALDRVALDGLTGSAPSFDVQGHRPADAGAGFTMQGQVGPLVTPSS EEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEECCCC DPWKVRVQAAFLLDGQPGGSLGLDGALSDPAHLRGYDVTLHATAGQVSGLNRLFVHAGLP CCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCC DVRNVDLAARIVDMADGDAAPQPGLRMLHLRAGPVDAGQVVPALRLDHLAIDAPTPADHM CCCCCCHHEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHEECEEEECCCCCCCCE TIQAAGTYGARPFDLHGTVGTLSETIAAARSRLGSPMPLDLSGDVAGAALHGGGSIGGGQ EEEECCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCC SDLDLHVAADRLALPGDRVLDHLTADAHVAMQGGDSVRLSGLRVMPPQMALAGGLDFTRH CCEEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCEEEECCEEECCCHHHHHCCCCEEEC GGTGGVPLLGGRIRADRLDLDALHITAPHAAAPTPRAPAPDTTAPAAPAPAPAPADAVLP CCCCCCCEECCEEECCEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FDRLRRMNIDLDLAASQLRLNGDDYHDALAHVLLRGGRLVIDPLRADGAGRHLNGTITVD HHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEECEEEEEE ASGDVPRLSASVGSLVLPAEWVAAQAGIPASVHGALQMVGVLDTQGTTRAALRSALAGHL CCCCCCCHHHCCCCEEECHHHHHHHCCCCHHHHHHEEEEEEECCCCCHHHHHHHHHHHHH GLSLVNGQIDGAALGRLLGPGAAGAAQDALGGLRCFGVHMALGGGQATLDTIGMQTRRLS CEEEECCCCCHHHHHHHHCCCCCCHHHHHHCCEEEEEEEEEECCCCEEHHHHCCEEEEEE VTGHGTVGLVRQDLDLHLVPQLLIGSTGAAMPVEIGGTIQAPQPRLDPAGAGRRFVLTIG EECCCEEEEEECCCCCEEEHHHHHCCCCCCCEEEECCEECCCCCCCCCCCCCCEEEEEEC PSSGIADPCPAALQAAREGQPGPAPGAAPKAKAPKVMDMLRGLGLFR CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA