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The map label for this gene is ygbF [H]

Identifier: 162147987

GI number: 162147987

Start: 2255185

End: 2255496

Strand: Reverse

Name: ygbF [H]

Synonym: GDI_2203

Alternate gene names: 162147987

Gene position: 2255496-2255185 (Counterclockwise)

Preceding gene: 162147988

Following gene: 162147984

Centisome position: 57.19

GC content: 66.99

Gene sequence:

>312_bases
TTGCGGGGGCGTCTGGCGGTCTGGCTTCTGGAAGTGCGCGCCGGCGTCTATGTCGGCACGTACGGTCAGCGCGTGCGCGA
GATGATCTGGGGACAGGTGTGCGCCTATATCGAGGATGGCAACGCCGTCATGGCATGGGCCGCCCCGAATGACGCCGGAT
TCGAGTTCGATACCTGTGGACGCAACCGCCGTGTAGCGGTTGACTTCGATGGTCTCCGACTGGTTTCGTTCGGACCGGAA
GCCGCCCTTCCGGCACAACCCGGCCCGGCCGCCACCACCCCTCCGCGTCGGCGGGGGCGGGGCGTACTCTAA

Upstream 100 bases:

>100_bases
GAGATGCCTCCGGCGCAGGATGAGGCCATGCCCGTGGCGTTCAAGGACGCGAAAGGGCTGGGCGATGCTGGTCATCGTGG
TTGAAAACGCACCCCCGCGC

Downstream 100 bases:

>100_bases
CCCAGGTTAAGATCGGTAGAATCTTTGACAATAAAATAGAGATTTGAGATCAATGTTTTCCACGAAGAGTGTTCCCCGCA
CGTGCGGGGATGAACCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MRGRLAVWLLEVRAGVYVGTYGQRVREMIWGQVCAYIEDGNAVMAWAAPNDAGFEFDTCGRNRRVAVDFDGLRLVSFGPE
AALPAQPGPAATTPPRRRGRGVL

Sequences:

>Translated_103_residues
MRGRLAVWLLEVRAGVYVGTYGQRVREMIWGQVCAYIEDGNAVMAWAAPNDAGFEFDTCGRNRRVAVDFDGLRLVSFGPE
AALPAQPGPAATTPPRRRGRGVL
>Mature_103_residues
MRGRLAVWLLEVRAGVYVGTYGQRVREMIWGQVCAYIEDGNAVMAWAAPNDAGFEFDTCGRNRRVAVDFDGLRLVSFGPE
AALPAQPGPAATTPPRRRGRGVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082153, Length=79, Percent_Identity=64.5569620253165, Blast_Score=110, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010152 [H]

Pfam domain/function: PF09707 Cas_Cas2CT1978 [H]

EC number: NA

Molecular weight: Translated: 11250; Mature: 11250

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGRLAVWLLEVRAGVYVGTYGQRVREMIWGQVCAYIEDGNAVMAWAAPNDAGFEFDTCG
CCCCEEEEEEEECCCEEECCHHHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCEECCCC
RNRRVAVDFDGLRLVSFGPEAALPAQPGPAATTPPRRRGRGVL
CCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRGRLAVWLLEVRAGVYVGTYGQRVREMIWGQVCAYIEDGNAVMAWAAPNDAGFEFDTCG
CCCCEEEEEEEECCCEEECCHHHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCEECCCC
RNRRVAVDFDGLRLVSFGPEAALPAQPGPAATTPPRRRGRGVL
CCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2656660; 9278503; 7567469 [H]