| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is yccK [H]
Identifier: 162147974
GI number: 162147974
Start: 2242880
End: 2243968
Strand: Direct
Name: yccK [H]
Synonym: GDI_2190
Alternate gene names: 162147974
Gene position: 2242880-2243968 (Clockwise)
Preceding gene: 162147973
Following gene: 162147975
Centisome position: 56.87
GC content: 67.22
Gene sequence:
>1089_bases ATGACGAACAGGACCCGGCCCGCGCACCGGCGCTGTCCGACCATTGTCCGGTCTCGGTCAGGCTGGAAATGCCTTAAAGT CCGCCTCTGGACATGCGCGTGTATGATTCGGAAAGGATATCATGGGATGGAACAGCGTCATCTCGGCCGGTCCGGCCTTC GCGTCTCGGCGGTGGGACTGGGGTGCAACAATCTCGGCGGCCGGATCGGGCTGGAAGAATCGCGCATGGTGGTGCACCAG GCGCTGGACAGCGGCATCACCCTGTTCGACGTCGCCGATGTCTATGGCCGGCGCGAATCCCATTGCGGCGCGTCCGAGGA AGTGTTGGGCGCGATCCTGGGCTCGCGTCGCGAGGACATCGTCCTGGCGACCAAGTTCGGCATGCCCATGGCCGCCGACG GCAGCATGCAGGGGGCATCCCGCCGCTATATCCGCCAGGCGGTCGAGGCCAGCCTGACGCGCCTGCGCACCGACCGCATC GACCTCTACCAGGTCCATGTCCCCGACCCGGACACCCCGATCGACGAGACGCTGCGCGCGCTGGACGACCTGATCCGTGA CGGCAAGGTCCTGTATGCCGGCTGTTCCAACTTTCCCGCATGGCAAGTCGCGGACGCCCATCACGTCGCGCGCGCGGGCG GGTTTTCGGGCTTCATTTCCTGCCAGGACGAACTGTCGCTGCTGGCGCGGGACGCGCTACGCGAACTGGTGCCGGCCATG CGCCGGTACGGCCTGGGATTGCTGCCCTACTTCCCGCTGGCCAGCGGCGTACTGACGGGCAAATACCATCGCGACATTCC GCCGCCCCCCGGCAGCCGGCTGAGCGAATGGACCCACCTGCGCGATCGCTACCTGACCGACACCAACTGGACGATCCTGG ACGGGCTGGGTTCGGTGGCCAGGGCGCATGGACGCACGCTGACGGAACTGGCCTTCGGCTGGCTGCTGTCGCATGACGTG GTGGGGTCGGTCATCGCCGGCGCCACCCGCCCGAATCAGGTGATTGAAAACGTCGCCGCCGCGACCCGCCCCCTGACGCC GGAGGAATGCGACGCGATCACCGCCATCCTGCCCGACCATGCGCGATGA
Upstream 100 bases:
>100_bases GCCAGCCCGTGCTGGGGAGGCACCTATTTCATCGACCATCTGCTGCTGGGCAACCAGGCGCGCGGGTGGCTGCGGCCGGA CAGCCTGCGGGTCCTGACCT
Downstream 100 bases:
>100_bases ACCGCCCGGGTTGCGCTGGCCGTCGCGCTGGCCGTCCATCGCGCTGGATTCGGGACTGACCGTACGGGTCGCGGGCCACA TGCCCGACCTGCCCGCCCCC
Product: oxidoreductase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MTNRTRPAHRRCPTIVRSRSGWKCLKVRLWTCACMIRKGYHGMEQRHLGRSGLRVSAVGLGCNNLGGRIGLEESRMVVHQ ALDSGITLFDVADVYGRRESHCGASEEVLGAILGSRREDIVLATKFGMPMAADGSMQGASRRYIRQAVEASLTRLRTDRI DLYQVHVPDPDTPIDETLRALDDLIRDGKVLYAGCSNFPAWQVADAHHVARAGGFSGFISCQDELSLLARDALRELVPAM RRYGLGLLPYFPLASGVLTGKYHRDIPPPPGSRLSEWTHLRDRYLTDTNWTILDGLGSVARAHGRTLTELAFGWLLSHDV VGSVIAGATRPNQVIENVAAATRPLTPEECDAITAILPDHAR
Sequences:
>Translated_362_residues MTNRTRPAHRRCPTIVRSRSGWKCLKVRLWTCACMIRKGYHGMEQRHLGRSGLRVSAVGLGCNNLGGRIGLEESRMVVHQ ALDSGITLFDVADVYGRRESHCGASEEVLGAILGSRREDIVLATKFGMPMAADGSMQGASRRYIRQAVEASLTRLRTDRI DLYQVHVPDPDTPIDETLRALDDLIRDGKVLYAGCSNFPAWQVADAHHVARAGGFSGFISCQDELSLLARDALRELVPAM RRYGLGLLPYFPLASGVLTGKYHRDIPPPPGSRLSEWTHLRDRYLTDTNWTILDGLGSVARAHGRTLTELAFGWLLSHDV VGSVIAGATRPNQVIENVAAATRPLTPEECDAITAILPDHAR >Mature_361_residues TNRTRPAHRRCPTIVRSRSGWKCLKVRLWTCACMIRKGYHGMEQRHLGRSGLRVSAVGLGCNNLGGRIGLEESRMVVHQA LDSGITLFDVADVYGRRESHCGASEEVLGAILGSRREDIVLATKFGMPMAADGSMQGASRRYIRQAVEASLTRLRTDRID LYQVHVPDPDTPIDETLRALDDLIRDGKVLYAGCSNFPAWQVADAHHVARAGGFSGFISCQDELSLLARDALRELVPAMR RYGLGLLPYFPLASGVLTGKYHRDIPPPPGSRLSEWTHLRDRYLTDTNWTILDGLGSVARAHGRTLTELAFGWLLSHDVV GSVIAGATRPNQVIENVAAATRPLTPEECDAITAILPDHAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=312, Percent_Identity=35.2564102564103, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI4504825, Length=303, Percent_Identity=35.3135313531353, Blast_Score=176, Evalue=2e-44, Organism=Homo sapiens, GI27436964, Length=307, Percent_Identity=33.5504885993485, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI27436962, Length=307, Percent_Identity=33.5504885993485, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI27436966, Length=307, Percent_Identity=33.5504885993485, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI27436971, Length=327, Percent_Identity=31.8042813455657, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI223718702, Length=320, Percent_Identity=30, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI41152114, Length=313, Percent_Identity=29.7124600638978, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI41327764, Length=317, Percent_Identity=30.2839116719243, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI223718708, Length=166, Percent_Identity=31.9277108433735, Blast_Score=76, Evalue=5e-14, Organism=Escherichia coli, GI87081735, Length=323, Percent_Identity=33.7461300309598, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI1789375, Length=311, Percent_Identity=33.4405144694534, Blast_Score=153, Evalue=2e-38, Organism=Escherichia coli, GI1789199, Length=339, Percent_Identity=28.9085545722714, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1788070, Length=324, Percent_Identity=31.4814814814815, Blast_Score=114, Evalue=8e-27, Organism=Escherichia coli, GI1788081, Length=318, Percent_Identity=25.7861635220126, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6325169, Length=335, Percent_Identity=29.8507462686567, Blast_Score=130, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6323998, Length=325, Percent_Identity=27.6923076923077, Blast_Score=116, Evalue=6e-27, Organism=Saccharomyces cerevisiae, GI6319958, Length=302, Percent_Identity=28.476821192053, Blast_Score=113, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6319951, Length=269, Percent_Identity=29.7397769516729, Blast_Score=107, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6322615, Length=250, Percent_Identity=29.6, Blast_Score=107, Evalue=4e-24, Organism=Drosophila melanogaster, GI24640980, Length=323, Percent_Identity=26.9349845201238, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI45549126, Length=323, Percent_Identity=26.9349845201238, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI24646155, Length=177, Percent_Identity=38.4180790960452, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24646159, Length=176, Percent_Identity=33.5227272727273, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 39836; Mature: 39705
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRTRPAHRRCPTIVRSRSGWKCLKVRLWTCACMIRKGYHGMEQRHLGRSGLRVSAVGL CCCCCCCHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEC GCNNLGGRIGLEESRMVVHQALDSGITLFDVADVYGRRESHCGASEEVLGAILGSRREDI CCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCHHHHHHHHHCCCCCCE VLATKFGMPMAADGSMQGASRRYIRQAVEASLTRLRTDRIDLYQVHVPDPDTPIDETLRA EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHH LDDLIRDGKVLYAGCSNFPAWQVADAHHVARAGGFSGFISCQDELSLLARDALRELVPAM HHHHHHCCCEEEEECCCCCCCEECCHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHH RRYGLGLLPYFPLASGVLTGKYHRDIPPPPGSRLSEWTHLRDRYLTDTNWTILDGLGSVA HHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH RAHGRTLTELAFGWLLSHDVVGSVIAGATRPNQVIENVAAATRPLTPEECDAITAILPDH HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC AR CC >Mature Secondary Structure TNRTRPAHRRCPTIVRSRSGWKCLKVRLWTCACMIRKGYHGMEQRHLGRSGLRVSAVGL CCCCCCHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEC GCNNLGGRIGLEESRMVVHQALDSGITLFDVADVYGRRESHCGASEEVLGAILGSRREDI CCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCHHHHHHHHHCCCCCCE VLATKFGMPMAADGSMQGASRRYIRQAVEASLTRLRTDRIDLYQVHVPDPDTPIDETLRA EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHH LDDLIRDGKVLYAGCSNFPAWQVADAHHVARAGGFSGFISCQDELSLLARDALRELVPAM HHHHHHCCCEEEEECCCCCCCEECCHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHH RRYGLGLLPYFPLASGVLTGKYHRDIPPPPGSRLSEWTHLRDRYLTDTNWTILDGLGSVA HHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH RAHGRTLTELAFGWLLSHDVVGSVIAGATRPNQVIENVAAATRPLTPEECDAITAILPDH HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC AR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]