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The map label for this gene is 162147944

Identifier: 162147944

GI number: 162147944

Start: 2212077

End: 2212772

Strand: Direct

Name: 162147944

Synonym: GDI_2160

Alternate gene names: NA

Gene position: 2212077-2212772 (Clockwise)

Preceding gene: 162147943

Following gene: 162147950

Centisome position: 56.08

GC content: 68.53

Gene sequence:

>696_bases
ATGCCGCCACGTTCCCGGGCCCTGGCCCGCCTGCCGCCCCATCCGTGGTCCACCTCGCCGGGCCCGGACATTCCCCCCCG
CGACTGCCCCGCCTGCCCCCGCCTGGTGGAGTACCGGCTGGCCAACCAGGCTGCCCACCCCGACTGGTGGAACCCTGTCC
ACCGTGGGGCGAGAGCAGCGCATTCACTGCTGATCGTGGGGCTGGCCCCCGGGGTAAAGGGCGCCAATCGCACCGCCCGC
CCGTTTACCGGCGATTACGCCGGAACGCTGCTGTACGAGACGCTGATCGAATACGGCTTCGCCACCGGGCGATACGGCGC
CGACCCGACGGACGGACTGGTGCTGAACGATTGCCGCATCGTCAATGCCGTGCGCTGCGTGCCCCCCGCCAACCTGCCCC
AGACGTCGGAAGTGCGGACCTGCAACCATTTCCTGCGGTCCGAACTGACATCCATGCCGAACCTGAAGGCCGTCCTGACG
CTGGGTGTCGTCGCCCATAACGCGACGGTGGCCGCCTGCGGAATTCCGATGTCGCGAATCCGCTTCACGCATGGGCAGGT
GCAGACCCTGCCGAACGGGCTGGTCCTGACCGACAGCTATCACGTGTCACGCTACAACACGAATACCGGCGTGCTGACCA
CCGACATGTTCCGGGCGGTGGTCGCCCGGCTGCGGGCCCTGATCGACGCGGCGTAG

Upstream 100 bases:

>100_bases
AATTCACCCGCCGCCAGGCCGAGGCGCGCCCGCAGCGCCAGCAGCAGGCCCCCGTTCGCCATCCGGCCGACCAGATCAGC
GAACTCGATCACGGCGACTG

Downstream 100 bases:

>100_bases
GACACCGGGCAGGGCATGGCGCCCTGCCCCGTTTTCCTTCAGCCTTCCAGTAGCAGCACGCGTGTCGTGTGCTCGTGGAC
CTGGGCGCACAGGTCCGGCC

Product: uracil DNA glycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MPPRSRALARLPPHPWSTSPGPDIPPRDCPACPRLVEYRLANQAAHPDWWNPVHRGARAAHSLLIVGLAPGVKGANRTAR
PFTGDYAGTLLYETLIEYGFATGRYGADPTDGLVLNDCRIVNAVRCVPPANLPQTSEVRTCNHFLRSELTSMPNLKAVLT
LGVVAHNATVAACGIPMSRIRFTHGQVQTLPNGLVLTDSYHVSRYNTNTGVLTTDMFRAVVARLRALIDAA

Sequences:

>Translated_231_residues
MPPRSRALARLPPHPWSTSPGPDIPPRDCPACPRLVEYRLANQAAHPDWWNPVHRGARAAHSLLIVGLAPGVKGANRTAR
PFTGDYAGTLLYETLIEYGFATGRYGADPTDGLVLNDCRIVNAVRCVPPANLPQTSEVRTCNHFLRSELTSMPNLKAVLT
LGVVAHNATVAACGIPMSRIRFTHGQVQTLPNGLVLTDSYHVSRYNTNTGVLTTDMFRAVVARLRALIDAA
>Mature_230_residues
PPRSRALARLPPHPWSTSPGPDIPPRDCPACPRLVEYRLANQAAHPDWWNPVHRGARAAHSLLIVGLAPGVKGANRTARP
FTGDYAGTLLYETLIEYGFATGRYGADPTDGLVLNDCRIVNAVRCVPPANLPQTSEVRTCNHFLRSELTSMPNLKAVLTL
GVVAHNATVAACGIPMSRIRFTHGQVQTLPNGLVLTDSYHVSRYNTNTGVLTTDMFRAVVARLRALIDAA

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1259 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 25062; Mature: 24931

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPRSRALARLPPHPWSTSPGPDIPPRDCPACPRLVEYRLANQAAHPDWWNPVHRGARAA
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH
HSLLIVGLAPGVKGANRTARPFTGDYAGTLLYETLIEYGFATGRYGADPTDGLVLNDCRI
HHEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHE
VNAVRCVPPANLPQTSEVRTCNHFLRSELTSMPNLKAVLTLGVVAHNATVAACGIPMSRI
EHHEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCHHHH
RFTHGQVQTLPNGLVLTDSYHVSRYNTNTGVLTTDMFRAVVARLRALIDAA
EECCCHHEECCCCEEEECCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PPRSRALARLPPHPWSTSPGPDIPPRDCPACPRLVEYRLANQAAHPDWWNPVHRGARAA
CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH
HSLLIVGLAPGVKGANRTARPFTGDYAGTLLYETLIEYGFATGRYGADPTDGLVLNDCRI
HHEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHE
VNAVRCVPPANLPQTSEVRTCNHFLRSELTSMPNLKAVLTLGVVAHNATVAACGIPMSRI
EHHEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCHHHH
RFTHGQVQTLPNGLVLTDSYHVSRYNTNTGVLTTDMFRAVVARLRALIDAA
EECCCHHEECCCCEEEECCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]