| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is engB [H]
Identifier: 162147918
GI number: 162147918
Start: 2188335
End: 2189006
Strand: Reverse
Name: engB [H]
Synonym: GDI_2134
Alternate gene names: 162147918
Gene position: 2189006-2188335 (Counterclockwise)
Preceding gene: 162147919
Following gene: 162147917
Centisome position: 55.5
GC content: 68.6
Gene sequence:
>672_bases ATGTCCGACTTCAACGCCACCCCCCGCACCCCGGACGAGGAAGAACGGCTGCTCGAAGCCGGCCGCCTGCTGTTTGCCGG TCCGTGTGATTTCTTCTTCGGGGCGCAGAAGCTGGAGCAGCTTCCGCCCCCCGGTGCGCCGGAAATCGCGTTCGCCGGAC GGTCGAATGTCGGGAAATCCAGCCTGATCAACGCCCTGACCGGACGCCGCGCACTGGCGCGCGCATCGTCGGAACCGGGG CGGACCAAGCAGCTGAATTTCTTCGACCTGGGGGGGCGGCTGACCCTGGTGGACATGCCGGGCTACGGCTACGCCCGCGC CGCGAAGGATGTGAAGGAAGACTGGCAGGGCATGATGTTCGCCTATCTGCGCGGACGTCCGACCCTGCAGCGCGTGATCC TGCTGCTGGATTCGCGGATCGAACTCAAGGCGTCGGACCGCGAGATCATGACGCTGCTGGACCGTGCGGCCGTGACGTTC CAGATCGTGCTGACGAAGTGCGACGCGCCGCGCCCCGGCGCGCTGGAAGCCAAGCGCAGCCAGGCGGCCGACCTGGCCCG GCAGCATCCGGCCGCCTATCCCGGAACCTTCGCCACCAGCAGCGACACTGGGCTGGGCATCCCCGAACTGCGCGCCGAAC TGGCGGCCCTGGCCCTGCCCCAAGCGGGCTGA
Upstream 100 bases:
>100_bases GTCGCGCAGCAGATGGTGATCCAGCGTCGCATGAAATCCGCCGTCGACAAGGTCGGTGCGATCCCGGCCGCCGCCGGGCG CAAGTGAGCGGCAGGGCCTG
Downstream 100 bases:
>100_bases ACCGGTTCCCATCATGACCAAGACGACAGGGCACGACCCGATGAGCGAATCCCAGAGCGAATTCCCAGGCGGCGGCACGA CCGGCGATATCGTGCGGACG
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSDFNATPRTPDEEERLLEAGRLLFAGPCDFFFGAQKLEQLPPPGAPEIAFAGRSNVGKSSLINALTGRRALARASSEPG RTKQLNFFDLGGRLTLVDMPGYGYARAAKDVKEDWQGMMFAYLRGRPTLQRVILLLDSRIELKASDREIMTLLDRAAVTF QIVLTKCDAPRPGALEAKRSQAADLARQHPAAYPGTFATSSDTGLGIPELRAELAALALPQAG
Sequences:
>Translated_223_residues MSDFNATPRTPDEEERLLEAGRLLFAGPCDFFFGAQKLEQLPPPGAPEIAFAGRSNVGKSSLINALTGRRALARASSEPG RTKQLNFFDLGGRLTLVDMPGYGYARAAKDVKEDWQGMMFAYLRGRPTLQRVILLLDSRIELKASDREIMTLLDRAAVTF QIVLTKCDAPRPGALEAKRSQAADLARQHPAAYPGTFATSSDTGLGIPELRAELAALALPQAG >Mature_222_residues SDFNATPRTPDEEERLLEAGRLLFAGPCDFFFGAQKLEQLPPPGAPEIAFAGRSNVGKSSLINALTGRRALARASSEPGR TKQLNFFDLGGRLTLVDMPGYGYARAAKDVKEDWQGMMFAYLRGRPTLQRVILLLDSRIELKASDREIMTLLDRAAVTFQ IVLTKCDAPRPGALEAKRSQAADLARQHPAAYPGTFATSSDTGLGIPELRAELAALALPQAG
Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI56549685, Length=192, Percent_Identity=36.9791666666667, Blast_Score=117, Evalue=8e-27, Organism=Homo sapiens, GI56549687, Length=140, Percent_Identity=35, Blast_Score=82, Evalue=4e-16, Organism=Escherichia coli, GI145693205, Length=189, Percent_Identity=35.4497354497354, Blast_Score=121, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6320543, Length=131, Percent_Identity=36.6412213740458, Blast_Score=85, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019987 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 24161; Mature: 24030
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFNATPRTPDEEERLLEAGRLLFAGPCDFFFGAQKLEQLPPPGAPEIAFAGRSNVGKS CCCCCCCCCCCCHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHH SLINALTGRRALARASSEPGRTKQLNFFDLGGRLTLVDMPGYGYARAAKDVKEDWQGMMF HHHHHHHHHHHHHHCCCCCCCCEECEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHH AYLRGRPTLQRVILLLDSRIELKASDREIMTLLDRAAVTFQIVLTKCDAPRPGALEAKRS HHHCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHH QAADLARQHPAAYPGTFATSSDTGLGIPELRAELAALALPQAG HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure SDFNATPRTPDEEERLLEAGRLLFAGPCDFFFGAQKLEQLPPPGAPEIAFAGRSNVGKS CCCCCCCCCCCHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHH SLINALTGRRALARASSEPGRTKQLNFFDLGGRLTLVDMPGYGYARAAKDVKEDWQGMMF HHHHHHHHHHHHHHCCCCCCCCEECEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHH AYLRGRPTLQRVILLLDSRIELKASDREIMTLLDRAAVTFQIVLTKCDAPRPGALEAKRS HHHCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHH QAADLARQHPAAYPGTFATSSDTGLGIPELRAELAALALPQAG HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA