Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

Click here to switch to the map view.

The map label for this gene is engB [H]

Identifier: 162147918

GI number: 162147918

Start: 2188335

End: 2189006

Strand: Reverse

Name: engB [H]

Synonym: GDI_2134

Alternate gene names: 162147918

Gene position: 2189006-2188335 (Counterclockwise)

Preceding gene: 162147919

Following gene: 162147917

Centisome position: 55.5

GC content: 68.6

Gene sequence:

>672_bases
ATGTCCGACTTCAACGCCACCCCCCGCACCCCGGACGAGGAAGAACGGCTGCTCGAAGCCGGCCGCCTGCTGTTTGCCGG
TCCGTGTGATTTCTTCTTCGGGGCGCAGAAGCTGGAGCAGCTTCCGCCCCCCGGTGCGCCGGAAATCGCGTTCGCCGGAC
GGTCGAATGTCGGGAAATCCAGCCTGATCAACGCCCTGACCGGACGCCGCGCACTGGCGCGCGCATCGTCGGAACCGGGG
CGGACCAAGCAGCTGAATTTCTTCGACCTGGGGGGGCGGCTGACCCTGGTGGACATGCCGGGCTACGGCTACGCCCGCGC
CGCGAAGGATGTGAAGGAAGACTGGCAGGGCATGATGTTCGCCTATCTGCGCGGACGTCCGACCCTGCAGCGCGTGATCC
TGCTGCTGGATTCGCGGATCGAACTCAAGGCGTCGGACCGCGAGATCATGACGCTGCTGGACCGTGCGGCCGTGACGTTC
CAGATCGTGCTGACGAAGTGCGACGCGCCGCGCCCCGGCGCGCTGGAAGCCAAGCGCAGCCAGGCGGCCGACCTGGCCCG
GCAGCATCCGGCCGCCTATCCCGGAACCTTCGCCACCAGCAGCGACACTGGGCTGGGCATCCCCGAACTGCGCGCCGAAC
TGGCGGCCCTGGCCCTGCCCCAAGCGGGCTGA

Upstream 100 bases:

>100_bases
GTCGCGCAGCAGATGGTGATCCAGCGTCGCATGAAATCCGCCGTCGACAAGGTCGGTGCGATCCCGGCCGCCGCCGGGCG
CAAGTGAGCGGCAGGGCCTG

Downstream 100 bases:

>100_bases
ACCGGTTCCCATCATGACCAAGACGACAGGGCACGACCCGATGAGCGAATCCCAGAGCGAATTCCCAGGCGGCGGCACGA
CCGGCGATATCGTGCGGACG

Product: ribosome biogenesis GTP-binding protein YsxC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSDFNATPRTPDEEERLLEAGRLLFAGPCDFFFGAQKLEQLPPPGAPEIAFAGRSNVGKSSLINALTGRRALARASSEPG
RTKQLNFFDLGGRLTLVDMPGYGYARAAKDVKEDWQGMMFAYLRGRPTLQRVILLLDSRIELKASDREIMTLLDRAAVTF
QIVLTKCDAPRPGALEAKRSQAADLARQHPAAYPGTFATSSDTGLGIPELRAELAALALPQAG

Sequences:

>Translated_223_residues
MSDFNATPRTPDEEERLLEAGRLLFAGPCDFFFGAQKLEQLPPPGAPEIAFAGRSNVGKSSLINALTGRRALARASSEPG
RTKQLNFFDLGGRLTLVDMPGYGYARAAKDVKEDWQGMMFAYLRGRPTLQRVILLLDSRIELKASDREIMTLLDRAAVTF
QIVLTKCDAPRPGALEAKRSQAADLARQHPAAYPGTFATSSDTGLGIPELRAELAALALPQAG
>Mature_222_residues
SDFNATPRTPDEEERLLEAGRLLFAGPCDFFFGAQKLEQLPPPGAPEIAFAGRSNVGKSSLINALTGRRALARASSEPGR
TKQLNFFDLGGRLTLVDMPGYGYARAAKDVKEDWQGMMFAYLRGRPTLQRVILLLDSRIELKASDREIMTLLDRAAVTFQ
IVLTKCDAPRPGALEAKRSQAADLARQHPAAYPGTFATSSDTGLGIPELRAELAALALPQAG

Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]

COG id: COG0218

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI56549685, Length=192, Percent_Identity=36.9791666666667, Blast_Score=117, Evalue=8e-27,
Organism=Homo sapiens, GI56549687, Length=140, Percent_Identity=35, Blast_Score=82, Evalue=4e-16,
Organism=Escherichia coli, GI145693205, Length=189, Percent_Identity=35.4497354497354, Blast_Score=121, Evalue=4e-29,
Organism=Saccharomyces cerevisiae, GI6320543, Length=131, Percent_Identity=36.6412213740458, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019987
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 24161; Mature: 24030

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFNATPRTPDEEERLLEAGRLLFAGPCDFFFGAQKLEQLPPPGAPEIAFAGRSNVGKS
CCCCCCCCCCCCHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHH
SLINALTGRRALARASSEPGRTKQLNFFDLGGRLTLVDMPGYGYARAAKDVKEDWQGMMF
HHHHHHHHHHHHHHCCCCCCCCEECEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
AYLRGRPTLQRVILLLDSRIELKASDREIMTLLDRAAVTFQIVLTKCDAPRPGALEAKRS
HHHCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHH
QAADLARQHPAAYPGTFATSSDTGLGIPELRAELAALALPQAG
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDFNATPRTPDEEERLLEAGRLLFAGPCDFFFGAQKLEQLPPPGAPEIAFAGRSNVGKS
CCCCCCCCCCCHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHH
SLINALTGRRALARASSEPGRTKQLNFFDLGGRLTLVDMPGYGYARAAKDVKEDWQGMMF
HHHHHHHHHHHHHHCCCCCCCCEECEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
AYLRGRPTLQRVILLLDSRIELKASDREIMTLLDRAAVTFQIVLTKCDAPRPGALEAKRS
HHHCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHH
QAADLARQHPAAYPGTFATSSDTGLGIPELRAELAALALPQAG
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA