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The map label for this gene is istB [H]

Identifier: 162147879

GI number: 162147879

Start: 2145039

End: 2145695

Strand: Reverse

Name: istB [H]

Synonym: GDI_2095

Alternate gene names: 162147879

Gene position: 2145695-2145039 (Counterclockwise)

Preceding gene: 162147880

Following gene: 162147877

Centisome position: 54.4

GC content: 60.12

Gene sequence:

>657_bases
ATGCGTCATGATCCCGCGGCCGGTGCCCTCGTCGTCATGCTGCGCGGCCTGCGGATGTATGGCATGGCCCAGGCCACGGC
CGAACTGACCGAACAGGGTGCGCCGGCATTCGAGGCCGCCATCCCCGTCCTCTTCCAGCTTTTGAAGGCGGAACTCGCCG
AGCGAGAGGTGCGCTCCATCGCCTATCAAACCAAGACTGCCAGGTTCCCGGCCTACAAAGATTTGGCAGGGTTCGATTTC
TCGGCCGCCGAGGTCAACGAGGCCATGGTCCGTCAACTCCATGCCGGGGATTTCATCGACCGTGCCGACAACGTCGTCCT
CATTGGTGGACCAGGAACCGGCAAGACCCATCTGGCCACAGCACTTCCGTGCAAGGCGATCGAACATCACCGCAAGAAGA
TACGGTTCTGGTCCACGGTAGACCTTGTCTACGCCCTCGAACAGGAAAAAACCGCCAATCGCGCAGGACAGATCGCGGAA
CGTCTCGTGCGCCTCGATCTCGTGATCCTGGACGAACTTGGCTATTTGCCGTTCAGCGCATCAGTCGGTGCCTTGCTGTT
CCATCTCCTCAGCCGTCTGTACGAGCGCACCAGCGTCATCATCGCCAGCAATCTGAGCTTCAGCGAATGGGGCGAAGTCT
TCGGTGTCCCAAAATGA

Upstream 100 bases:

>100_bases
ACAGGAGCACCCAGGCTCGACGCGCCGCAGGCATTGGTGCTCGAACGCGAGCCTCAGGCCGATACCGGACGGTATGACGC
CCTGCGCGGGGAGGCCCGTC

Downstream 100 bases:

>100_bases
CGACAGCCCTGCTCGATCGCCTTACCCACCTCTGTCATATCCTCGAAACCGGAAATGACAGCTACCGGTTCCGCGCAAGG
TCCGCCGCCCCCAGGAACCG

Product: IstB-like ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MRHDPAAGALVVMLRGLRMYGMAQATAELTEQGAPAFEAAIPVLFQLLKAELAEREVRSIAYQTKTARFPAYKDLAGFDF
SAAEVNEAMVRQLHAGDFIDRADNVVLIGGPGTGKTHLATALPCKAIEHHRKKIRFWSTVDLVYALEQEKTANRAGQIAE
RLVRLDLVILDELGYLPFSASVGALLFHLLSRLYERTSVIIASNLSFSEWGEVFGVPK

Sequences:

>Translated_218_residues
MRHDPAAGALVVMLRGLRMYGMAQATAELTEQGAPAFEAAIPVLFQLLKAELAEREVRSIAYQTKTARFPAYKDLAGFDF
SAAEVNEAMVRQLHAGDFIDRADNVVLIGGPGTGKTHLATALPCKAIEHHRKKIRFWSTVDLVYALEQEKTANRAGQIAE
RLVRLDLVILDELGYLPFSASVGALLFHLLSRLYERTSVIIASNLSFSEWGEVFGVPK
>Mature_218_residues
MRHDPAAGALVVMLRGLRMYGMAQATAELTEQGAPAFEAAIPVLFQLLKAELAEREVRSIAYQTKTARFPAYKDLAGFDF
SAAEVNEAMVRQLHAGDFIDRADNVVLIGGPGTGKTHLATALPCKAIEHHRKKIRFWSTVDLVYALEQEKTANRAGQIAE
RLVRLDLVILDELGYLPFSASVGALLFHLLSRLYERTSVIIASNLSFSEWGEVFGVPK

Specific function: One of two proteins expressed only when there is a tandem repeat of the IS21 insertion sequence, it is necessary for the transposition of plasmids with that tandem repeat [H]

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001270
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 24013; Mature: 24013

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHDPAAGALVVMLRGLRMYGMAQATAELTEQGAPAFEAAIPVLFQLLKAELAEREVRSI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AYQTKTARFPAYKDLAGFDFSAAEVNEAMVRQLHAGDFIDRADNVVLIGGPGTGKTHLAT
HHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCHHHHH
ALPCKAIEHHRKKIRFWSTVDLVYALEQEKTANRAGQIAERLVRLDLVILDELGYLPFSA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SVGALLFHLLSRLYERTSVIIASNLSFSEWGEVFGVPK
CHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCCCC
>Mature Secondary Structure
MRHDPAAGALVVMLRGLRMYGMAQATAELTEQGAPAFEAAIPVLFQLLKAELAEREVRSI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AYQTKTARFPAYKDLAGFDFSAAEVNEAMVRQLHAGDFIDRADNVVLIGGPGTGKTHLAT
HHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCHHHHH
ALPCKAIEHHRKKIRFWSTVDLVYALEQEKTANRAGQIAERLVRLDLVILDELGYLPFSA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SVGALLFHLLSRLYERTSVIIASNLSFSEWGEVFGVPK
CHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2540414 [H]