Click here to switch to the map view.

The map label for this gene is 162147847

Identifier: 162147847

GI number: 162147847

Start: 2108166

End: 2108762

Strand: Reverse

Name: 162147847

Synonym: GDI_2063

Alternate gene names: NA

Gene position: 2108762-2108166 (Counterclockwise)

Preceding gene: 162147848

Following gene: 162147846

Centisome position: 53.47

GC content: 72.36

Gene sequence:

>597_bases
GTGGGCGTGCGCCGACGGCGGACTCTGAGAGAAGACGAACAGGCGCTGTGGACGGCTTTCGTGCGGGATATCAAGCCGCT
GGCGCGAAAGGCGGCGGCCGGTAACCCCGCTGGCGCGCCCGAGCCTGCTCCCGTTCCGGACGTCGTTCCTTCTCCGGTCC
GGGGCCGCCGTGCCGCGCCCCTTGCCGCCGGATCGCCCCAGCCGGCGCCCCTGCAGCCCCGCGTGCCCGCCTATACCCTG
CACCGGTCGCAGGCCAGCGTGGAAATCGGCGAACGCCGGCCGGGGCTGGATGATACCAGTTGGCGCGCCCTGGTCAGCGG
CAAGCTGCGCCCGACCCGCACGCTGGACCTGCACGGGCAGAACGTGCAGGCGGCCTTTCAACGCCTTCATGCCTTCCTGG
TCCAGGCACGGGCCGACAATCTGCGCTGCGTCGAGGTCATTACCGGGTTGGGGTCCGGCCGGCAGGGCGGTGTCCTGCGG
CGCGAACTGCCCTTCTGGCTGGGCCGCCCGGACCTGCGGCCGCTGATCCTGGCCGTCACCCATCCGCACGCCGCCAACCA
GGGATCGGTGCGGATTCTCCTGCGCCGGCGGGGCTGA

Upstream 100 bases:

>100_bases
CCAACTGGCTGAAACCACGCACTGAAGGGGGAACGGATCGCGATCGGGTCTTCGGCCCGGGCGCGATCTGCTCTAAGACA
GGCCCATTCCGGATGGAGGG

Downstream 100 bases:

>100_bases
CTCCGGCTTCGTACCGGCACGGATCTTGCGGGGGCGCGTGCAGGACGACCTGCAAACATGCGAGCCATGCACGCAAGCCC
GCTTCTTTCGCGAATGCTTC

Product: small MutS related protein

Products: NA

Alternate protein names: Smr Domain-Containing Protein; Smr Family Protein; DNA Mismatch Repair; Small MutS Related Protein

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MGVRRRRTLREDEQALWTAFVRDIKPLARKAAAGNPAGAPEPAPVPDVVPSPVRGRRAAPLAAGSPQPAPLQPRVPAYTL
HRSQASVEIGERRPGLDDTSWRALVSGKLRPTRTLDLHGQNVQAAFQRLHAFLVQARADNLRCVEVITGLGSGRQGGVLR
RELPFWLGRPDLRPLILAVTHPHAANQGSVRILLRRRG

Sequences:

>Translated_198_residues
MGVRRRRTLREDEQALWTAFVRDIKPLARKAAAGNPAGAPEPAPVPDVVPSPVRGRRAAPLAAGSPQPAPLQPRVPAYTL
HRSQASVEIGERRPGLDDTSWRALVSGKLRPTRTLDLHGQNVQAAFQRLHAFLVQARADNLRCVEVITGLGSGRQGGVLR
RELPFWLGRPDLRPLILAVTHPHAANQGSVRILLRRRG
>Mature_197_residues
GVRRRRTLREDEQALWTAFVRDIKPLARKAAAGNPAGAPEPAPVPDVVPSPVRGRRAAPLAAGSPQPAPLQPRVPAYTLH
RSQASVEIGERRPGLDDTSWRALVSGKLRPTRTLDLHGQNVQAAFQRLHAFLVQARADNLRCVEVITGLGSGRQGGVLRR
ELPFWLGRPDLRPLILAVTHPHAANQGSVRILLRRRG

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21674; Mature: 21543

Theoretical pI: Translated: 12.29; Mature: 12.29

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVRRRRTLREDEQALWTAFVRDIKPLARKAAAGNPAGAPEPAPVPDVVPSPVRGRRAAP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LAAGSPQPAPLQPRVPAYTLHRSQASVEIGERRPGLDDTSWRALVSGKLRPTRTLDLHGQ
CCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHCCCCCCCEEEECCCC
NVQAAFQRLHAFLVQARADNLRCVEVITGLGSGRQGGVLRRELPFWLGRPDLRPLILAVT
CHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHCCHHCCCCCCCEEEEEEE
HPHAANQGSVRILLRRRG
CCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
GVRRRRTLREDEQALWTAFVRDIKPLARKAAAGNPAGAPEPAPVPDVVPSPVRGRRAAP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LAAGSPQPAPLQPRVPAYTLHRSQASVEIGERRPGLDDTSWRALVSGKLRPTRTLDLHGQ
CCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHCCCCCCCEEEECCCC
NVQAAFQRLHAFLVQARADNLRCVEVITGLGSGRQGGVLRRELPFWLGRPDLRPLILAVT
CHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHCCHHCCCCCCCEEEEEEE
HPHAANQGSVRILLRRRG
CCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA