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The map label for this gene is ybhN [C]

Identifier: 162147829

GI number: 162147829

Start: 2088938

End: 2091016

Strand: Reverse

Name: ybhN [C]

Synonym: GDI_2045

Alternate gene names: 162147829

Gene position: 2091016-2088938 (Counterclockwise)

Preceding gene: 162147830

Following gene: 162147828

Centisome position: 53.02

GC content: 69.79

Gene sequence:

>2079_bases
ATGTTCCTGAATCGACAAGACATGCAGGGCGCGCCGCCGCCATCGCCGCCGCCCGGCTGGCGACGCCTGCTGCGGCACGT
TCCCCACGTCCTGGGGCTGGGCCTGATGGTCGCCGCGATCATCGTGGTCCAGCACGAGGTCCGGGACCTGCACTGGGACG
ATATCCGTGCCGCCCTGCGGACGATCCCGACCTCGACCCTGGCGCTGGGGGTGGGCTGCACGGTCCTGTCGTACTTCATC
CTGTCCTTCTACGACTGCCTGGCGGTCGTGCAGGTCGGGCGCCGGCTGCCCTTCCGGCGGACGGCGTTCGCCGCGTTCTG
TTCCTATGTCCTGTCGCACAATCTGGGGTTTGCCGCGATTTCCGGGGCGGCGGTCCGGTTCCGGCTCTACGGCAACTGGG
GGCTCTGCACGTTCGACATCGCGCAGATCATCGCCTTCTGCTCGGTGACCTATCTGCTGGGGGCGGGGACGCTGGTCGGG
GCGGTCCTGGTGCTGGAGCCCGATGCGGTTCCCGTGATCGGCGCGCACCTGCCGCGTCTGCTGCTGTCGGGGATCGGGCT
TCTGATGTGGGCGGGGGTCGGGGCCTATATCCTGCTGGGGCTGCGCCTGACGCATGTGCGCGTCTGCCGGCATACCGTGG
TCCTGCCGCGCCCGGCCATGGCCCTGGCCCAGACGCTGGTCGCGACGGCCGAGGTCGCGGCGACGGCGGGCATCGCCTAT
ATCTTCCTGCCCTCGGGCGTGGGGCTGGGATATGGCGTGTTCCTGGCGATCTACATCGCATCCTATACGGCGGGACTGGT
CGCCAGCGTGCCGGGGGGGCTGGGGGTCTTCGACGGGGCGATGATGCTCGCCCTCGGCCCCTATCTGCCGCCGTCGCAGA
TCATCAGCACCATCCTGATCTTCCGGCTGTTCTATTACATCATCCCGCTGTTCCTGGCCGGCCTGATGTTCGCGGGGCAT
GAGCTGTTCCTGCGTGGCGACGCCGCCCTGACGCGCAAGACCGTCCCCCGCGCGCCGCGCCGGGGGCCGCGCGACATCCG
CCCCAGCCACGTGATCCGTGAAAGCGAGGCCGATTTCTCGGTCGTCGTGGCGACGGGCGCGGTGTCGATCTGCGGTGCGC
TGCTGATCGCGCTGACGATCCTGGACCCGGCATCGTGGAGCAATGCGGGCGGCCTGCACCATATGGTCGGCGTCGCGGGC
GACTATCTGCTGTCGCTGATCGGCGTGGCGCTGATCGGCCTGGCGATCGGCCTGTCCCAGCGCGTGACGCTGGCGTGGAA
GGTGACGCTGGGCCTGCTGATCGGCGCGTCGGCCCTGACGCTGCTGCGGGGGGCATCGCTGGCGGTGCCGGGCATCCTGG
CCATGGTGGCGATCCTGATCGCGCCGTTTCGCAGTTCCTACTACCGGCATGCGCGCATCCTCAGCGAACCCCTGGCCTTC
CGCACCTTCCTGTCGCTGGTACTGCTGATCGGCTGCGTGCTGGTCCTGGTGTGTTCCGGCCCGCGGGACGAGGTCGGCGG
AAGCTGGTGGGAGGTGATGCTGTTCACCTCGGCCCACGGTGTGGCGCAGTGGACGATGGGGCTGGCCGTCGTGCTGGGCC
TGATCATGATCGGCCGGCTGGTCCGTCCCGGCCAGATCGCGGTGCTGCCGTGGAACGCCGAGGGGCGGGCTCTCTATCAC
GCGCTGGACCACGCACTGGACGATCCGGCCCCGATGGCGCCGAGCGGGCTGATTCCCGGCGAATCCGGCATGGCCCTGCT
GCCGTTCCTGCGGACGGACGCGTACCTGATCGGGCTGGGCGACCCCGCCGGCGCCTGGGACGATTGCGCCTCGGCCATCT
GGTGGCTGCGCGACCTGGCGGTACAGGAGGGCCGCCAGCCGGCTTTCTGGCAGGTGGGCGCGTCGATGCTGGATGTCTAC
AACGATCTGGGCCTGACCTCCTGGCCGGTGTCCGACATGGACATGGCCCGGACGGACGACGGGGACGACGTGTTCCTGTG
CTGCGTTCCCCAGAGCGTGGCCGGCGTGCGTGCCGCCATGCGGACTCTTGCGCCCCCCGCCCCGGCGGACGGGGCTTGA

Upstream 100 bases:

>100_bases
GCTGATCGAGGCCGCGCTGCTTCGTCCCTCGGTCGAGGCCCCGGCCGGCGGTGCCGGCTGAGAGCCGCGACATCCCTGTC
ATGACGTTTCGCAGCCCGTC

Downstream 100 bases:

>100_bases
CGGGCCCGCGGGCTTCGGAAAAGACGATAGGCTGATCCCGGCCTTACGGGGATCGGCCCTTTGGAAGAACCGCCATGCCC
CCAGGCCTTCCCGCCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 692; Mature: 692

Protein sequence:

>692_residues
MFLNRQDMQGAPPPSPPPGWRRLLRHVPHVLGLGLMVAAIIVVQHEVRDLHWDDIRAALRTIPTSTLALGVGCTVLSYFI
LSFYDCLAVVQVGRRLPFRRTAFAAFCSYVLSHNLGFAAISGAAVRFRLYGNWGLCTFDIAQIIAFCSVTYLLGAGTLVG
AVLVLEPDAVPVIGAHLPRLLLSGIGLLMWAGVGAYILLGLRLTHVRVCRHTVVLPRPAMALAQTLVATAEVAATAGIAY
IFLPSGVGLGYGVFLAIYIASYTAGLVASVPGGLGVFDGAMMLALGPYLPPSQIISTILIFRLFYYIIPLFLAGLMFAGH
ELFLRGDAALTRKTVPRAPRRGPRDIRPSHVIRESEADFSVVVATGAVSICGALLIALTILDPASWSNAGGLHHMVGVAG
DYLLSLIGVALIGLAIGLSQRVTLAWKVTLGLLIGASALTLLRGASLAVPGILAMVAILIAPFRSSYYRHARILSEPLAF
RTFLSLVLLIGCVLVLVCSGPRDEVGGSWWEVMLFTSAHGVAQWTMGLAVVLGLIMIGRLVRPGQIAVLPWNAEGRALYH
ALDHALDDPAPMAPSGLIPGESGMALLPFLRTDAYLIGLGDPAGAWDDCASAIWWLRDLAVQEGRQPAFWQVGASMLDVY
NDLGLTSWPVSDMDMARTDDGDDVFLCCVPQSVAGVRAAMRTLAPPAPADGA

Sequences:

>Translated_692_residues
MFLNRQDMQGAPPPSPPPGWRRLLRHVPHVLGLGLMVAAIIVVQHEVRDLHWDDIRAALRTIPTSTLALGVGCTVLSYFI
LSFYDCLAVVQVGRRLPFRRTAFAAFCSYVLSHNLGFAAISGAAVRFRLYGNWGLCTFDIAQIIAFCSVTYLLGAGTLVG
AVLVLEPDAVPVIGAHLPRLLLSGIGLLMWAGVGAYILLGLRLTHVRVCRHTVVLPRPAMALAQTLVATAEVAATAGIAY
IFLPSGVGLGYGVFLAIYIASYTAGLVASVPGGLGVFDGAMMLALGPYLPPSQIISTILIFRLFYYIIPLFLAGLMFAGH
ELFLRGDAALTRKTVPRAPRRGPRDIRPSHVIRESEADFSVVVATGAVSICGALLIALTILDPASWSNAGGLHHMVGVAG
DYLLSLIGVALIGLAIGLSQRVTLAWKVTLGLLIGASALTLLRGASLAVPGILAMVAILIAPFRSSYYRHARILSEPLAF
RTFLSLVLLIGCVLVLVCSGPRDEVGGSWWEVMLFTSAHGVAQWTMGLAVVLGLIMIGRLVRPGQIAVLPWNAEGRALYH
ALDHALDDPAPMAPSGLIPGESGMALLPFLRTDAYLIGLGDPAGAWDDCASAIWWLRDLAVQEGRQPAFWQVGASMLDVY
NDLGLTSWPVSDMDMARTDDGDDVFLCCVPQSVAGVRAAMRTLAPPAPADGA
>Mature_692_residues
MFLNRQDMQGAPPPSPPPGWRRLLRHVPHVLGLGLMVAAIIVVQHEVRDLHWDDIRAALRTIPTSTLALGVGCTVLSYFI
LSFYDCLAVVQVGRRLPFRRTAFAAFCSYVLSHNLGFAAISGAAVRFRLYGNWGLCTFDIAQIIAFCSVTYLLGAGTLVG
AVLVLEPDAVPVIGAHLPRLLLSGIGLLMWAGVGAYILLGLRLTHVRVCRHTVVLPRPAMALAQTLVATAEVAATAGIAY
IFLPSGVGLGYGVFLAIYIASYTAGLVASVPGGLGVFDGAMMLALGPYLPPSQIISTILIFRLFYYIIPLFLAGLMFAGH
ELFLRGDAALTRKTVPRAPRRGPRDIRPSHVIRESEADFSVVVATGAVSICGALLIALTILDPASWSNAGGLHHMVGVAG
DYLLSLIGVALIGLAIGLSQRVTLAWKVTLGLLIGASALTLLRGASLAVPGILAMVAILIAPFRSSYYRHARILSEPLAF
RTFLSLVLLIGCVLVLVCSGPRDEVGGSWWEVMLFTSAHGVAQWTMGLAVVLGLIMIGRLVRPGQIAVLPWNAEGRALYH
ALDHALDDPAPMAPSGLIPGESGMALLPFLRTDAYLIGLGDPAGAWDDCASAIWWLRDLAVQEGRQPAFWQVGASMLDVY
NDLGLTSWPVSDMDMARTDDGDDVFLCCVPQSVAGVRAAMRTLAPPAPADGA

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybhN [H]

Homologues:

Organism=Escherichia coli, GI1787006, Length=301, Percent_Identity=28.2392026578073, Blast_Score=99, Evalue=7e-22,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 73622; Mature: 73622

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLNRQDMQGAPPPSPPPGWRRLLRHVPHVLGLGLMVAAIIVVQHEVRDLHWDDIRAALR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
TIPTSTLALGVGCTVLSYFILSFYDCLAVVQVGRRLPFRRTAFAAFCSYVLSHNLGFAAI
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEE
SGAAVRFRLYGNWGLCTFDIAQIIAFCSVTYLLGAGTLVGAVLVLEPDAVPVIGAHLPRL
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHH
LLSGIGLLMWAGVGAYILLGLRLTHVRVCRHTVVLPRPAMALAQTLVATAEVAATAGIAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCEEE
IFLPSGVGLGYGVFLAIYIASYTAGLVASVPGGLGVFDGAMMLALGPYLPPSQIISTILI
EEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
FRLFYYIIPLFLAGLMFAGHELFLRGDAALTRKTVPRAPRRGPRDIRPSHVIRESEADFS
HHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCEE
VVVATGAVSICGALLIALTILDPASWSNAGGLHHMVGVAGDYLLSLIGVALIGLAIGLSQ
EEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RVTLAWKVTLGLLIGASALTLLRGASLAVPGILAMVAILIAPFRSSYYRHARILSEPLAF
CEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTFLSLVLLIGCVLVLVCSGPRDEVGGSWWEVMLFTSAHGVAQWTMGLAVVLGLIMIGRL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHC
VRPGQIAVLPWNAEGRALYHALDHALDDPAPMAPSGLIPGESGMALLPFLRTDAYLIGLG
CCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHCCCEEEEECC
DPAGAWDDCASAIWWLRDLAVQEGRQPAFWQVGASMLDVYNDLGLTSWPVSDMDMARTDD
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GDDVFLCCVPQSVAGVRAAMRTLAPPAPADGA
CCCEEEEECCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFLNRQDMQGAPPPSPPPGWRRLLRHVPHVLGLGLMVAAIIVVQHEVRDLHWDDIRAALR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
TIPTSTLALGVGCTVLSYFILSFYDCLAVVQVGRRLPFRRTAFAAFCSYVLSHNLGFAAI
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEE
SGAAVRFRLYGNWGLCTFDIAQIIAFCSVTYLLGAGTLVGAVLVLEPDAVPVIGAHLPRL
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHH
LLSGIGLLMWAGVGAYILLGLRLTHVRVCRHTVVLPRPAMALAQTLVATAEVAATAGIAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCEEE
IFLPSGVGLGYGVFLAIYIASYTAGLVASVPGGLGVFDGAMMLALGPYLPPSQIISTILI
EEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
FRLFYYIIPLFLAGLMFAGHELFLRGDAALTRKTVPRAPRRGPRDIRPSHVIRESEADFS
HHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCEE
VVVATGAVSICGALLIALTILDPASWSNAGGLHHMVGVAGDYLLSLIGVALIGLAIGLSQ
EEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RVTLAWKVTLGLLIGASALTLLRGASLAVPGILAMVAILIAPFRSSYYRHARILSEPLAF
CEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTFLSLVLLIGCVLVLVCSGPRDEVGGSWWEVMLFTSAHGVAQWTMGLAVVLGLIMIGRL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHC
VRPGQIAVLPWNAEGRALYHALDHALDDPAPMAPSGLIPGESGMALLPFLRTDAYLIGLG
CCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHCCCEEEEECC
DPAGAWDDCASAIWWLRDLAVQEGRQPAFWQVGASMLDVYNDLGLTSWPVSDMDMARTDD
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GDDVFLCCVPQSVAGVRAAMRTLAPPAPADGA
CCCEEEEECCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]