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The map label for this gene is yizB [H]

Identifier: 162147762

GI number: 162147762

Start: 2010340

End: 2010675

Strand: Reverse

Name: yizB [H]

Synonym: GDI_1978

Alternate gene names: 162147762

Gene position: 2010675-2010340 (Counterclockwise)

Preceding gene: 162147763

Following gene: 162147761

Centisome position: 50.98

GC content: 58.63

Gene sequence:

>336_bases
GTGGACCCTAATCTTGTCCAATTCAAAAAGGGGGTGCTGGAACTCTGCGTCCTGGCGCTTCTCTCGCGCGCTGACTCGTA
CGGCTACGACATCGCCAGCCGTCTGTCGGATGCGATCGATATGGGGGAGGGTACGATATACCCGCTGATGCGTCGCATGC
AGAAGGACGGGCTGGTGTCCACCTATCTGGTGGAATCGTCCTCGGGCCCGCCGCGAAAATATTACCGCCTGACTGAAGGC
GGTCGGAAAAATCTGGATGCCCAAAAGGCTGCATGGAACGATTTCACGCGCTCTGTCGCCGCCGTCCTGGAGCAGGATCA
GGAGAAGACGCCATGA

Upstream 100 bases:

>100_bases
TATCCCCCAACAAGACTATTGCAAGGAACCATCTAATGATGGCTATCTTGCATAGACAGGTTCTGCGTTGGTGCGGGACC
GGTCCGAGGATCGACACGCC

Downstream 100 bases:

>100_bases
ATGAGCGACAAACGTTCCTCCGCCGCCTGAAGGCCGGCCTGAAGGGGATGCCGCGACCTGCCATCGACGACATCATGGCC
GATTACGAAGGGCATTTCGA

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MDPNLVQFKKGVLELCVLALLSRADSYGYDIASRLSDAIDMGEGTIYPLMRRMQKDGLVSTYLVESSSGPPRKYYRLTEG
GRKNLDAQKAAWNDFTRSVAAVLEQDQEKTP

Sequences:

>Translated_111_residues
MDPNLVQFKKGVLELCVLALLSRADSYGYDIASRLSDAIDMGEGTIYPLMRRMQKDGLVSTYLVESSSGPPRKYYRLTEG
GRKNLDAQKAAWNDFTRSVAAVLEQDQEKTP
>Mature_111_residues
MDPNLVQFKKGVLELCVLALLSRADSYGYDIASRLSDAIDMGEGTIYPLMRRMQKDGLVSTYLVESSSGPPRKYYRLTEG
GRKNLDAQKAAWNDFTRSVAAVLEQDQEKTP

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 12421; Mature: 12421

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPNLVQFKKGVLELCVLALLSRADSYGYDIASRLSDAIDMGEGTIYPLMRRMQKDGLVS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHH
TYLVESSSGPPRKYYRLTEGGRKNLDAQKAAWNDFTRSVAAVLEQDQEKTP
HHEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDPNLVQFKKGVLELCVLALLSRADSYGYDIASRLSDAIDMGEGTIYPLMRRMQKDGLVS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHH
TYLVESSSGPPRKYYRLTEGGRKNLDAQKAAWNDFTRSVAAVLEQDQEKTP
HHEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]